Vibrio furnissii: vfu_A02982
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Entry
vfu_A02982 CDS
T01680
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
vfu
Vibrio furnissii
Pathway
vfu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
vfu_A02982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vfu03021
]
vfu_A02982
Transcription machinery [BR:
vfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
vfu_A02982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ADT88092
LinkDB
All DBs
Position
1:complement(3114071..3115060)
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AA seq
329 aa
AA seq
DB search
MSISNTATKVEEFEFDSEAVNNAATDQELTTNDNDQSEEVREEFDASTKSLDATQMYLSE
IGFSPLLTAEEEVLYARRALRGDEAARKRMIESNLRLVVKISRRYSNRGLALLDLIEEGN
LGLIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRTARE
LSQKLDHEPTAEEIAVELDKPVDDVSKMLRLNERISSVDTPIGGDGDKALLDIIPDINNS
DPEVSTQDDDIRDSLVAWLDELNPKQKEVLARRFGLLGYEPSTLEEVGREINLTRERVRQ
IQVEGLRRLREILMKQGLNMESLFNVEND
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcagcaatacagccactaaagtcgaagagtttgagttcgattcagaagccgtg
aataacgcggcgaccgaccaagaactgactaccaacgataatgaccaatctgaagaggtt
cgtgaagagtttgatgcttccacgaaaagcctcgatgccactcagatgtatctgagtgag
attggtttctcacccttattaaccgccgaagaagaagtactctatgctcgccgcgccttg
cgtggtgatgaggctgcgcgcaaacgcatgatcgagagcaacttacgtctggtggtcaaa
atctctcgccgttatagcaatcggggcttggcactgcttgacctgattgaagagggcaac
cttggcctcattcgtgcagtagagaaattcgacccagaacgcggtttccgtttttcgact
tatgctacctggtggattcgtcagaccattgaacgtgcgctgatgaaccagactcgtacg
attcgtttaccaattcatgtggtgaaagagctgaacatctacttgcgtactgcgcgtgag
ctgtctcagaaactcgaccacgaaccgaccgcggaagaaattgccgtggaactggataag
ccagtggatgatgtcagcaaaatgctccgtctgaacgagcgcattagctccgtcgatacg
ccaattggcggcgatggtgacaaagcattgctcgatatcatccctgatatcaacaattcc
gaccctgaagtctccacacaggatgacgatattcgtgattcgctggtggcttggctcgat
gagctcaatccgaaacagaaagaagtgctggctcgccgttttggcttgttagggtatgag
ccatcaacactggaagaagtgggccgcgagatcaatttgacccgtgaacgtgtgcgtcaa
attcaggtggaaggcttgcgccgactaagagaaatcctgatgaaacagggtttgaacatg
gaatcgctgtttaatgtggaaaacgactaa
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