Vibrio furnissii: vfu_A03119
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Entry
vfu_A03119 CDS
T01680
Name
(GenBank) MSHA biogenesis protein MshH
KO
K18765
RNase E specificity factor CsrD
Organism
vfu
Vibrio furnissii
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vfu03019
]
vfu_A03119
Messenger RNA biogenesis [BR:
vfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
vfu_A03119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Motif
Other DBs
NCBI-ProteinID:
ADT88224
LinkDB
All DBs
Position
1:complement(3252594..3254552)
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AA seq
652 aa
AA seq
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MVAFVTLIVTSAMFILFIGGALSFQRMGQEYLNHYLQGIVEVVDKELEDPDAAYSMQRWM
PKMLQASNIVEMQLSSQAGTIYRFKDTSSKADPDRLYAVDLPLARNQGYSIHFKAVPPYL
GYGYSMGAMWSISLAVALIVFCLVRSIKWLREQLMGSELLEERGRMILAGRVEQFAKGDE
REWPYTASEALDVLIEELQDARQERSRFDTFIRSQTFLDQLTGAANRVLFDSKLESALLE
SGARGGVIMIRLDELDAAREEQEKRTIDEFVVEVGECISNVIARYPDVILSRYYESVFAI
FMPHQSSKDVAHVATQCLKLIERLSPPYPLDADNWFHIGVSMYQEGERRGRIIDEAETAL
KSAGLQGCNAWSKFKKVAKVEDERGSVRWRSLFNQCLTPEKIRLFRQSCYLSEELNGLTL
IHDELFVRIYDPEQGILKASRFSAALETVGYEMVLDRAVFVRVLQLLKMTDFTGHYSLNM
NVTPFADKRYLRWFRNELMQLPHSLRSRLSFEFSEGHLVQHLDYMRPVLKMIAGLGCDLV
VGQAGRTIVATHYIKDLNIKYLKLHRSLIKNIDQRHENQLFVRSMIGVCGGTQTKVIAVG
VENETEWQTLLSLGVDGGQGRLFEAEQALLPAPLDQADTHVKPGKRNRWRTK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgcgtttgtcaccctgatcgtcaccagcgccatgttcatcttgttcattggcggc
gcactttcctttcagcgaatggggcaggaatacctcaatcactacttgcaagggatcgtg
gaagtggtggataaagagctggaagatccggacgctgcctattcaatgcagcgctggatg
ccgaaaatgttgcaagcgtcaaacatcgtcgaaatgcagctctcttctcaagcgggcacc
atctaccgtttcaaagacacctcctcaaaagcagatcccgatcggctctatgccgtcgac
ctacctttagcgcgtaaccaaggctattcaattcatttcaaagcggtgccaccgtacctc
ggatatgggtattcgatgggcgcgatgtggtcgatttctttggcggtcgcgttgatcgtg
ttctgtctggttcgcagcattaagtggttgcgtgagcagttaatggggtctgaattgctg
gaggagcgcgggcgcatgattttagccgggcgtgtcgagcagttcgccaaaggggatgag
cgcgaatggccttacaccgccagtgaagcattggacgtgctgattgaggagttacaagat
gcgcgccaagagcgcagccgctttgataccttcattcgcagccaaacctttttggatcag
ctcaccggtgctgccaaccgagtgctgtttgacagcaagttagaatcggcactgcttgaa
agcggcgcgcgtggtggcgtgatcatgattcgtttggatgagttagatgccgcgcgggaa
gagcaagaaaaacgcaccatcgatgaatttgtggtggaagtgggtgagtgcatttccaac
gtgattgcgcgttatccagacgtcattttgtcgcgttactacgaatccgtgttcgccatc
tttatgccgcatcaaagctctaaagatgtcgcgcacgttgccacgcaatgtctgaaactg
attgagcgtttgtcgccgccttatccgctcgatgcggataattggttccacatcggcgtc
agcatgtatcaggaaggggagcgccgaggccgtattattgatgaagcagaaaccgcgctg
aagagtgccggtcttcaaggctgtaacgcgtggagtaagtttaagaaagtcgccaaagtg
gaggatgagcgcggcagtgtacgctggcgttccttattcaatcagtgtcttacgcctgag
aaaatcagattattccgacagtcgtgctatttatcggaagaattgaatggattaacattg
attcacgacgagctgtttgttcgaatctacgatcctgagcaaggcatcctgaaagcatcc
cgcttcagcgccgccctggaaacggtcggttatgaaatggtgttggatcgcgcggtattt
gttcgtgtgttacaactgctgaaaatgaccgatttcacggggcactattccctgaacatg
aatgtcacgccatttgccgataagcgttatttacgttggttccgcaatgaattgatgcaa
ctgccacacagtttgcgttcacgcttgtcgtttgaattctctgaaggtcacttagtgcag
cacctcgactacatgcgcccggtactgaaaatgattgcggggctcggctgcgatttagtg
gtcggccaagcgggtcggacgatcgtcgcaacgcattacattaaagatctcaacattaag
tatttgaaattacaccgcagtttgataaagaatatcgatcagcgccatgaaaatcagctg
tttgtacgcagtatgattggcgtctgtggtggtacgcaaacaaaagtcattgccgtcggc
gtagaaaatgagaccgaatggcaaaccttgctatcgctgggggttgatggagggcaggga
cgtttgtttgaagcggaacaagcgctgttacctgcaccactcgatcaggctgacacacac
gtgaaaccgggtaaacgcaatcgctggcgaaccaagtaa
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