Vibrio furnissii: vfu_B00272
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Entry
vfu_B00272 CDS
T01680
Name
(GenBank) exonuclease SbcD, hypothetical
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vfu
Vibrio furnissii
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfu03400
]
vfu_B00272
DNA repair and recombination proteins [BR:
vfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
vfu_B00272
Archaeal homologous recombinant proteins
vfu_B00272
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Ortholog
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GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DNA_pol_E_B
BAHCC1-like_Tudor
Motif
Other DBs
NCBI-ProteinID:
ADT88517
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Position
2:complement(270367..271509)
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AA seq
380 aa
AA seq
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MKFLHTSDWHLGRQFHNVSLLEDQRYVLNQLIDYLENNPVDAVIVAGDVYDRSVPPTIAI
ELLDDVVSRICTELSIPMIVIPGNHDGAKRLGFAAKQMKNAGLHIISDFEQMMTPVVLSS
PQAGEVAFYGMPYNDPEQVRHHYQTSVTTHDDAHQFLCEQIKAALNPSQRHVLISHCFVD
GAMESESERPLSIGGSDRVNHEHFSSFDYVALGHLHQPQQKGEAHIRYSGSLMKYSFSEQ
HQKKGMTLVEFNDAGFVSAQHIRLNAPHDMRIIEGELDDLLAQGKTDPHHHDYLLVRLQD
KHAILDPMDKLRKVYPNVLHLEKPGMLIGVDQEMGRARLARGEMDMFRDFFLEAKQEALT
EQQESAMADVIQSLKQAEQH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcttcacacctctgattggcacttaggtcgtcaatttcacaatgtgtctctt
ctagaagatcagcgttacgtcctcaatcaattaattgattatttagaaaataatcccgtt
gatgccgtcattgtggcgggggatgtgtatgaccgttctgtaccgccgaccattgcgatt
gaactgttggatgacgtggtcagccgtatttgtacggaattgtcgattccgatgattgtg
attccgggcaaccacgatggtgccaagcgccttggttttgccgccaaacagatgaaaaat
gcgggtttgcacatcatcagcgattttgaacagatgatgacgcccgtggttttatcctcg
ccgcaggcgggtgaagtggcgttttatggcatgccttacaacgacccagagcaggttcgt
catcattatcaaaccagcgtcaccacccatgatgacgcgcatcagtttctgtgcgagcaa
atcaaagcggcattgaatccgtcacaacgtcacgtattaatcagtcactgctttgtggat
ggggcgatggaatccgagtcagagcgaccgctgtcgattggtggttccgatcgggtcaat
catgaacatttttcgagctttgactacgtggcgttagggcatttgcatcagccacagcaa
aaaggtgaagcgcatatccgctattctggctcgttgatgaaatacagtttctccgagcag
catcagaaaaaaggcatgacattggtggaattcaacgacgccggttttgtgtctgcgcag
catattcggctgaatgcgccacacgacatgcgcatcatcgaaggtgaactggatgacttg
ctggcgcaggggaaaactgaccctcaccatcacgactatctgttagtgcgtttgcaagac
aaacacgcgattttggatccgatggataagttgcgaaaggtgtatcccaacgtcttgcac
ctcgaaaaaccgggcatgctgattggtgtggatcaggaaatgggccgcgcacgtttggca
cgcggtgaaatggatatgttccgcgatttcttccttgaagcaaaacaagaagcgctcact
gagcaacaagaatcggccatggccgacgtgattcagtctctcaagcaagcggagcaacat
tga
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