Vibrio furnissii: vfu_B01186
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Entry
vfu_B01186 CDS
T01680
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
vfu
Vibrio furnissii
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vfu03000
]
vfu_B01186
Transcription factors [BR:
vfu03000
]
Prokaryotic type
Helix-turn-helix
Other families
vfu_B01186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA_16
AAA
GAF
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
ADT89374
LinkDB
All DBs
Position
2:1244818..1246407
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AA seq
529 aa
AA seq
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MSNWLAFTADLVGLRKPHQLATRFVDIIAQELGLSNAMLLMPSSDGRLLVPHDERLTYSW
AVTDFDNPFAHVLQSSKAMHLTAEELVFWQSNRTFSQLVSKVGMFDSVWIQPLPMGHRHV
QSILLLIGESHVVANIFQDDAFLKFIDVFSQQWSLLHDMEREEQNRRALKESLCDIQRDS
VQRVLVSDLSRKLIGDSEVMQKLREQIVSAASSNLSVMVQGETGTGKELAAEAVHDLSSR
KHAPFVAINCAAIPENLLESELFGYCKGAFSGADSDKQGLIAQANGGTLFLDEIGDMPLA
LQAKLLRVLESKTFRPVGGKQELTSDFRLVSATHVNLLDQVRRKAFRQDLYYRLFQYPIT
LPRLASRLDDVDLLAQHFVRVFNQQHGKNIRGLHYSAIDCLKQHDFPGNVRELKHLIEFG
CAQTADGTQVEEHCFTHRIASMAMLSPAVSAHDEPIMPQATQPQHARATTGQNYSVIHDL
KQALSDFEEKIIRERLNHFSGDRAKAAQSLGIPKRTLAYKCQKLEIKAL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactggctcgcgttcactgccgatctggtgggccttcgaaagccgcaccagttg
gcgacccggtttgttgacatcatcgcgcaggagcttgggctttcgaacgcgatgttgttg
atgcccagctctgatggtcgtctcttggtccctcatgatgaacgcctgacctattcatgg
gcggtcaccgattttgataatccgtttgcgcatgtgctgcaatcgtcaaaagccatgcat
ctgaccgcggaagagctggtgttttggcagtcaaaccgcacattcagccaactggtgtca
aaagtgggaatgtttgattccgtgtggattcaaccgttgccgatggggcatcgccatgtg
caatcgattttgctgttgattggcgaaagccatgtggtggcgaacattttccaagatgat
gccttcctgaaattcatcgatgtgttctcgcagcagtggtcactgctgcatgacatggaa
cgggaagaacaaaaccgccgcgcgcttaaagagtcgctgtgtgacattcaacgtgattcc
gtgcagcgagtattggtgagcgacctgtcgcgcaaactgattggcgacagtgaggtgatg
cagaagctgcgtgagcaaatcgtcagtgcagccagctctaatctgtcggtgatggtgcag
ggggaaacgggtacggggaaagaactggcggctgaagcggtacacgatctttcatcacgc
aaacatgcgccgtttgtggccatcaactgtgccgccattcccgaaaatttacttgaaagt
gaactgtttgggtattgcaaaggcgccttctcgggcgcagacagcgataagcaaggactg
atcgcccaagccaacggtggcaccttgtttctcgatgaaataggcgatatgccactggcg
ctgcaagcaaagttgctgcgggtgctggagtcgaaaaccttccgtccggtcgggggcaag
caagaactgacatcagactttcgcttggtgtcggcaacgcatgtcaacttgctggatcag
gtgcgtcgcaaagcgtttcgtcaggatctttactatcgtctgttccagtatccgatcacc
ttgccacgccttgcttcccgtctggatgatgtggatttgctggcgcaacattttgtgcgt
gtgttcaatcagcagcacggcaaaaacattcgtggcctgcactacagcgcgatcgattgc
ctcaaacaacatgatttcccgggcaatgtccgtgaactcaagcatctgattgaatttggc
tgcgcgcaaacagccgatggcacgcaggttgaagagcactgttttacgcaccgcattgct
tcgatggcgatgctatcgccagcggtgtctgctcacgatgagcccatcatgccgcaggcg
actcaacctcagcacgcccgagcaacgacgggacaaaactactcggtgattcacgatctc
aaacaagcactgagcgactttgaagaaaaaatcattcgcgaacgcctcaatcacttttcg
ggtgaccgcgccaaagcggcgcagagccttggcattccgaagcgcaccttggcgtacaaa
tgtcagaagctggagattaaggcgttatga
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