Vagococcus fluvialis: K5K99_00440
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Entry
K5K99_00440 CDS
T07851
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vfv
Vagococcus fluvialis
Brite
KEGG Orthology (KO) [BR:
vfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfv03400
]
K5K99_00440
DNA repair and recombination proteins [BR:
vfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K5K99_00440
Archaeal homologous recombinant proteins
K5K99_00440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
Imm74
Motif
Other DBs
NCBI-ProteinID:
UDM74142
LinkDB
All DBs
Position
complement(77663..80791)
Genome browser
AA seq
1042 aa
AA seq
DB search
MQPIRLELENFGPYEATEIDFSMYYAHTLFLISGKTGSGKTTIFDGMMYALYGKTSGGLR
EGKEMRSNFADSGNKTKVTFEFKQDNQTYVIEREPEQLVKKVSGEGYREQKNSARLTVFD
SEKNEINQIIKISEVDKYIANLVGLNREQFSQIVMLPQGEFRRFLNADSNSKEVVLRKLF
STYFYRDIAQLLKTKKKEEESKFKGLDHSLSAEINQLEWEDDWLEKAAAEENFQELLNLY
EEQHEVYITKDKTNKKQLKISQEKVKENQDLLNMAEKLLEQFREKKQIDNELNKLKLKET
EIKEDKEKVSLLKKAEKIESVVESDEALKEELNNRQIKIVENKATKKELQQQFDVLENTL
TKLQSDKEAIQIKEKKLDKIETSIPLFEEKTLTEEKLISLQEQLEKTKQTYNEQLEKQAE
LVKTKVVLTTNISKESEILQKKSDTREHLRTITDRLEEIESYELKRLTTKKLEEELANLM
KKSANKETDLENSSQAYRQLESDWAKAQIAKLSLKLIDGEPCLICGSTEHPNPAQSHELT
EEAINELEKNIEVQDELLNQLKEQVTTLKNQVSFKEDELAKSKELLKEEQEILVSYFKEL
EETQWLERAKEQENEIKVELNAFDNKLTKISEEKEELIKLEREENSLKETLIHQETEVSS
LNNQLIEVETINQNILKQLPSEWKLLDEMLEEQTRLMSETTKWHEEVRSTENALTNLKLE
LATLETTITNDLKELEVNKRKQILSEQKINEFLIENKLSEKILENLLSDLPQLESLEEAI
KTYENKRHVLLSRQEELTKLIKNQEEPVIEPLLVEQERLMSELEEVRNKTNILELTMKKN
QEIVVKVKREIESKKEAQARLLELTELADILSGDGPSKLSMERFVLQMYLKKILQRGNEK
LVTLTNGRYRFEIKEEQGSSKKATGLEINIYDDNVGAIRSVNTLSGGESFIAALSLALSL
AEIIQEEAGGIKIDAMFIDEGFGSLDEDALEMAIRALENIEGEGRIIGIISHVRELKERI
PQQLQIISENGKSKVKTRLEFE
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccaattcgattagagttagaaaattttgggccatatgaagcaacagaaatcgat
ttttccatgtattatgctcatactctatttttaatttcaggaaaaactggctcaggaaaa
acgacaatttttgatggtatgatgtacgctctttacggaaaaacatcaggcggattaaga
gaaggtaaagaaatgcgttcgaattttgcggactctggaaataaaactaaggtgactttt
gaatttaaacaagataaccaaacttatgtaatagaaagagaacctgagcaattagtcaaa
aaagtgtcaggtgaaggctatagagaacaaaaaaattcagctagattaactgtttttgat
agtgagaaaaatgaaattaatcagattattaagatttcagaagttgataagtatattgct
aatttagtaggattaaatagagaacaattttctcaaatcgtgatgttaccacaaggtgaa
tttagacggtttttaaatgcagatagtaattcaaaagaagttgttttacgtaaactattc
agcacttatttttatcgtgatattgctcaattattaaagaccaagaaaaaagaagaagaa
tcaaaatttaaaggtttagatcatagtttatcagctgaaattaaccagttagagtgggaa
gatgactggttagaaaaagcagcagcagaagagaattttcaagaattacttaacctttat
gaagagcaacatgaagtgtatataacaaaagataaaactaataaaaagcaattaaaaata
agccaagaaaaagtaaaagagaatcaagacttacttaatatggcagaaaagttgttggaa
caatttagagaaaaaaaacaaattgataacgagttaaataaattaaaacttaaagaaact
gaaatcaaggaagataaagaaaaagtaagtttgcttaaaaaggcggaaaaaatcgaatct
gttgtagaatctgatgaagccttaaaagaagaactaaacaatcgccaaatcaaaatagtt
gaaaataaagcgactaaaaaggagctgcaacaacaatttgacgtcctagaaaatacactt
actaaacttcaatcagataaagaagccattcaaataaaagaaaaaaaactagacaaaatt
gaaacgagtattcccttatttgaagagaaaacgttaactgaagaaaaattaatcagctta
caagaacaacttgaaaaaacaaaacaaacttataatgagcaattagaaaaacaagctgag
ttagttaaaactaaagttgttttgacaactaatatttcaaaagaatctgaaattttgcaa
aaaaaatcagatactagagaacatttaagaactattacagatagactagaggaaattgaa
agttatgagttaaaaagattaacaactaaaaaattagaagaagaactagctaatttaatg
aaaaaatcagctaacaaagaaactgacttagaaaactcaagtcaagcttaccgacaatta
gagagtgactgggccaaagctcaaattgctaaattaagtttaaaactaattgatggggaa
ccttgcttaatttgtggctcaacagaacatcctaatcctgctcaaagtcatgaactaaca
gaagaagctattaatgaacttgaaaaaaatattgaggtacaagatgaattacttaatcag
ttaaaagagcaggtaacaacgttaaaaaaccaagtcagctttaaagaggatgaattagct
aaaagtaaagaactactaaaagaagaacaagaaatattagtatcttactttaaagagtta
gaagaaactcagtggttagaaagagcaaaagaacaagaaaacgaaatcaaagtagaacta
aatgcatttgataataaattgactaaaatcagtgaggaaaaagaagagctcattaaactt
gaaagagaagaaaactctctaaaagaaactttaattcatcaagaaactgaagttagttct
ttaaataatcagttaattgaagttgagacaatcaaccaaaatattttaaaacaattacct
agtgagtggaaattattagatgagatgttagaagaacaaactcgtttaatgtctgaaaca
actaagtggcatgaagaagtaaggtcaacagaaaatgcattaacaaatctaaaattagaa
ttagcaactcttgaaacaaccatcactaatgatttaaaagaacttgaagttaataaacgg
aagcaaattttatcagaacaaaagataaatgagtttttaatagaaaataaactgagcgaa
aaaatattagaaaatctattaagtgatttgcctcagttagaaagtttagaagaagctatt
aaaacttatgaaaataaacgccatgtgttattaagtagacaagaagagttaactaaactg
attaaaaaccaagaagaacctgtaatagagcctcttttagtcgaacaagaaagattaatg
agtgagttagaagaagttagaaataaaactaacatattagagcttacgatgaaaaaaaat
caagaaatagtagtaaaagtaaaacgagaaatcgaatctaaaaaagaagctcaagcaaga
ttattagagttaacagaactagcagatattttatcaggagatggaccaagtaaattaagt
atggagcgctttgttctacaaatgtatctgaaaaaaatattacaacgaggaaatgaaaaa
ttagtaacactaacaaatggtcgttaccgatttgaaattaaagaagaacaaggttcctct
aaaaaagcaacaggcttagaaattaatatctacgatgataatgtaggagcgattcgaagt
gtcaatactttgtcaggtggtgagagctttattgctgctctatcccttgctttatcatta
gctgaaattattcaagaagaagcagggggcattaaaattgatgccatgtttattgatgaa
ggctttggttcactagatgaagatgcactagagatggctattagagctcttgaaaatatt
gagggtgaaggtagaataatcggcattatctctcatgttagagaactaaaagaacgtata
ccgcaacagttacaaattatctctgaaaatggaaaaagtaaagtgaagacacgactagaa
ttcgaatag
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