KEGG   Vagococcus fluvialis: K5K99_01820
Entry
K5K99_01820       CDS       T07851                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vfv  Vagococcus fluvialis
Brite
KEGG Orthology (KO) [BR:vfv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vfv02048]
    K5K99_01820
Enzymes [BR:vfv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     K5K99_01820
Prokaryotic defense system [BR:vfv02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   K5K99_01820
SSDB
Motif
Pfam: T1R_D3-like SWI2_SNF2 ResIII HSDR_N EcoR124_C DEAD
Other DBs
NCBI-ProteinID: UDM74393
LinkDB
Position
complement(349547..352618)
AA seq 1023 aa
MKTSKLKSQTELAFENEVIDYLTQIGGVKQWEYKKEIKTTEQLWNNFKHILEKNNQSRLT
DKLSETEFNQVKKIISDIHTPYQAGQFLYGVNGISEVEVDLDDGRHVFLTVFDQTQVGAG
NTTYQVVNQIERPRVVDGKQNRRFDVTLLINGLPIIQIELKKMLRSANDSLNQMEQYIAE
KQYTGIFSTLQLLVAMTPYDIRYMANAELHHFNKAFAFNWQNEKDARPIRSWKDFSDKVL
SIPMAHDLATRYMILDGTKNKESIKVMRPYQVYATKRVLEQVSRFDFKYEDGRMGYIWHT
TGSGKTITSFKTAWLASRLSNVSKVVFLVDRVALTNQTVDAYQAYDPIAGFEGKTGVVSD
TANVSDLHRKLTMKSDKNIIVTSIQKMSRYVSRDNFKPLEGNILFIVDEAHRSTGDGSKS
DGMLESIRKAVPTSAWVGYTGTPKFPETREIFGNLLHAYTIKEAIADKNVLGFNVEFKET
IEAPKDPSAEDIDDNIRGSVYDTSPEHVDLVVQDIFDNWKERSNNGRYNALFTVHVGGNK
ASTPRAMAYFDKFVEENKKRPESERLKVAISFSMDTSNGDNQLQTNDNLHRAIKEYNQLF
NTSWDMKTVKSYTEDVARRLNKTSQDGKYLDLVIVVDQFLTGFDAPELNTLYIDRTLKGA
NLIQAYSRTNRLQDLDAKPWGKVVNYRWPAQNELEMNKAFAIYSDRDSASEQLSLEELKE
KNQKSGIIAKPFSEVQGELQKVVGCLYELTDEFNQLPPSERQQDQVFESLTEYNTLLSQL
KQYTEDDDKNPVSAYDNPEDFYERIGITEEQEVLLTTVIADELRQSRAKREDIDISHVNL
SLVHIHDIKINYDYLIDLIAKMANEVHKNQMDKAQHTREEIHQEIAKSDNDQEKAKVHQF
VSKIFDKEFIFDKYPVSNNVEEMNEAMDRSQKDTNIRLLTQFIRHWGLDNSVKPKELENL
IKKHRLGQEDMDKQGELTNIMNDARDDYQEIADEKVVKLSWVRYRIEFRKAFYKMADEIA
KGE
NT seq 3072 nt   +upstreamnt  +downstreamnt
atgaaaacttctaaactaaaaagtcaaacagaattagcttttgaaaatgaagtaattgat
tatttaactcagataggtggagttaaacaatgggaatataaaaaagaaataaaaacaaca
gagcagctgtggaataattttaagcatattttagaaaagaataatcaatctagattaact
gataagttaagtgaaacagagtttaatcaagtgaagaaaataatttctgatattcataca
ccttatcaagctggacaatttctatatggtgttaatggaatctcagaagtagaagtagat
cttgacgatggtagacatgtttttttaactgtatttgatcaaacacaagttggtgcggga
aatacaacgtatcaagtagttaatcaaattgagagacctcgtgtagttgatggtaaacag
aatcgccgttttgatgtcacgttacttattaatggattaccaattattcaaattgaacta
aaaaaaatgttacgtagtgctaatgattccttaaatcagatggaacaatacattgcagag
aaacaatatacaggaattttttcgacattgcagctcttagttgctatgactccttatgac
attcgttatatggcaaatgcggaattacatcattttaataaagcttttgcgtttaactgg
caaaatgaaaaagatgctcgaccaattcgttcttggaaagacttttctgataaggtattg
tctattcctatggctcatgatttagcaacgcgctatatgattcttgatggaaccaaaaat
aaagaaagcataaaagtcatgagaccttatcaggtatatgcgactaaaagagttcttgag
caagtcagtcgatttgattttaaatatgaagatggtcgcatggggtatatttggcacaca
acaggatcaggaaaaactattacaagttttaaaacagcgtggctagcaagtcgtttgtct
aatgttagtaaagtggtgtttttagttgatcgagttgcattaaccaatcagacagttgat
gcctatcaagcctatgatcctattgcaggttttgaagggaagacaggtgttgttagtgac
actgccaacgtatcagatcttcaccgaaaactaactatgaaaagtgataaaaatattatt
gtaacaagtattcaaaagatgtcacgctatgtttcaagagataattttaaaccacttgaa
ggtaatattttatttatagttgatgaagcacaccgttcaactggtgatggttctaagagt
gatggaatgcttgagagtattcgtaaagcagtaccaacttctgcttgggttggttataca
gggacacccaaattccctgagacaagagaaatttttggaaatctactacatgcgtatacc
attaaagaagctatagctgataaaaacgttcttggatttaatgttgaatttaaggaaaca
attgaagcgcctaaggacccatcagcagaagatatagatgataatatccgtggtagcgtt
tatgatactagcccagagcatgttgatttggtagttcaagatatttttgataattggaag
gaacgatctaacaatggtagatacaatgccttatttacagtacatgtaggtgggaataaa
gcaagtacaccaagggcaatggcttactttgataaatttgtagaagaaaataaaaaacgt
ccagagtcagagcgtttgaaagttgctattagcttttctatggatacttctaatggggat
aatcaattacaaacaaacgacaaccttcaccgagcgataaaagaatataatcaactattt
aatacgtcatgggatatgaagacagtaaaatcttatacagaggatgtggcacgacgttta
aataaaacgtcgcaagatggaaagtatcttgatttagttattgttgttgatcagttttta
acgggatttgatgcgcctgaattaaacacactctatattgatcgaacgttaaaaggggct
aacttgattcaagcctactcacgaactaatcgtttacaggatttagacgctaagccttgg
gggaaagtggttaattatagatggccagctcaaaatgaacttgagatgaataaagcgttt
gctatctattctgatagagactctgcaagtgagcaactttctttagaagaactgaaagaa
aaaaatcaaaaatctggcattattgctaaaccatttagtgaagttcaaggggagttacag
aaagtagttggttgcctatatgaattaacagatgaatttaaccagctaccgccaagtgag
agacaacaagatcaagtatttgagagcttaacagagtataataccctactaagccaatta
aaacagtatacagaagatgatgataaaaatcctgtttcggcctatgataacccagaagat
ttctatgaaagaattggtatcactgaagagcaggaagttttgttgacaacagtaatagct
gatgagttacgtcagagccgagcaaaacgagaagacatagatatttctcacgttaattta
tccttagtccatattcatgatattaaaatcaactatgattatttgattgatttgattgct
aaaatggctaacgaagttcataaaaatcaaatggataaagctcaacatactcgagaggaa
attcatcaggaaattgccaagtcagataatgatcaagaaaaagcaaaagtgcatcagttt
gtttctaagatttttgataaagaatttatttttgataagtatcctgtatcaaataatgta
gaagagatgaatgaagcgatggatcgctctcagaaagatactaatattcgtttactaact
caatttatccgtcactggggattagataatagtgtgaaaccaaaagagttagaaaatcta
atcaaaaaacatcgtctaggtcaagaagatatggacaaacaaggtgagctgactaatatc
atgaatgatgctagagatgattatcaagaaatagctgacgaaaaagttgttaagctatct
tgggttagatatcgaatcgaatttaggaaggctttttataagatggccgatgaaattgca
aagggagagtag

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