Vagococcus fluvialis: K5K99_03940
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Entry
K5K99_03940 CDS
T07851
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vfv
Vagococcus fluvialis
Pathway
vfv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K5K99_03940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfv03400
]
K5K99_03940
Enzymes [BR:
vfv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K5K99_03940
DNA repair and recombination proteins [BR:
vfv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K5K99_03940
Prokaryotic type
K5K99_03940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UDM74736
LinkDB
All DBs
Position
complement(740981..741643)
Genome browser
AA seq
220 aa
AA seq
DB search
MRLQLPNNWEKHLADEIKQDYFKELELFLDEEYKNQIIFPKEEDIFTALEATSFEETQVV
ILGQDPYHGENQAHGLSFSVLPGEKLPPSLRNIYQELESDVGVTRTDGYLLPWATQGILL
LNTVLTVRKGQAHSHKNKGWEKLTDAIIKKLNLRESPVIFVLWGKPAQSKKAMIDTEKHY
IIEAPHPSPLSAYRGFFGSQPFSVINKLLTEQSKKNIHWG
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagattacaactaccaaataattgggaaaagcacttagcagatgaaataaaacaagac
tattttaaagagttagagcttttcttagatgaagaatataaaaaccaaatcatttttcca
aaagaagaagatatttttacagctttagaggcaacatcctttgaagaaacacaagtcgtt
attttaggtcaagatccttatcacggagaaaatcaagctcacgggttaagcttctctgtt
ttaccaggagagaaattacctccttcccttagaaatatctatcaagaattagaatcagat
gttggtgtcactagaacagatggttacttacttccctgggctactcaaggtatccttctt
ttaaatactgttttaactgttagaaaaggacaagcccactcacataaaaacaaaggctgg
gaaaagttaacagatgccattataaaaaaactaaatcttcgtgaatctcctgttattttt
gttttgtggggaaaacctgctcaaagtaaaaaagccatgattgacaccgaaaaacattat
attattgaggcgccacatccaagtccattgtctgcttatcgcggatttttcgggagccaa
ccattttctgttattaataagttattaacagaacaaagtaagaaaaatatccactgggga
taa
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