Vagococcus fluvialis: K5K99_04515
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Entry
K5K99_04515 CDS
T07851
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vfv
Vagococcus fluvialis
Brite
KEGG Orthology (KO) [BR:
vfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfv03400
]
K5K99_04515 (radA)
DNA repair and recombination proteins [BR:
vfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K5K99_04515 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
Lon_C
AAA_14
SLFN-g3_helicase
AAA_22
AAA
AAA_16
nSTAND_NTPase5
ABC_tran
AAA_24
nSTAND3
ATPase_2
Zeta_toxin
Elong_Iki1
NTPase_1
AAA_19
GvpD_P-loop
CobU
AAA_5
NPHP3_N
MCM
AAA_18
DUF7129
ATP-synt_ab
NACHT
T2SSE
NB-ARC
KdpD
A2L_zn_ribbon
Mur_ligase_C
RsgA_GTPase
KTI12
AAA_29
DZR
Motif
Other DBs
NCBI-ProteinID:
UDM74841
LinkDB
All DBs
Position
868204..869589
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AA seq
461 aa
AA seq
DB search
MAKKKKNEFVCQECGYISPKYLGRCPNCGNWNTLVEEIIQEQATRHSRVSLTGESTKPQK
LNQVTFKTEKRVQTDLEELNRVLGGGVVPGSMVLIGGDPGIGKSTLLLQVSQQLSKIDDN
VLYVSGEESAEQIKMRAERLDSENNNFYVYAETDMEIIKQTIEQLRPNYVVIDSIQTMIH
PEIKSAAGSVSQVRETTAELMQIAKTNQITIFIVGHVTKEGSLAGPRMLEHMVDTVLYFE
GERHHTFRILRAVKNRFGSTNEIGIFEMRQEGLVEVKNPSEAFLEERLADATGSAIVCSM
EGTRPILAEVQALITPSVFGNANRTAAGLDRHRVSLIMAVLEKRSGLLLQNQDAYLKAAG
GVKLDEPAIDLAIAVSIASSYKDQGTSPHECFIGEIGLTGEVRRVNRIDQRVQEAKKLGF
KKIYVPKNNLQGWKVPTGIDIIGVSTVSETLRKVFNQEGRK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaaagaaaaatgagtttgtttgtcaagaatgtggctatatttcacctaag
tatttagggagatgtcctaattgtggtaattggaatactctcgttgaagaaattatacaa
gagcaagcaactcgccatagtagagtgagcttaacaggtgaatcaacaaaaccacaaaaa
ttaaatcaagtaaccttcaaaactgaaaaaagggtgcaaacagatttagaagaattaaat
agagttctaggtggtggcgtggttcctggctctatggtgttaattgggggagaccctggt
attggtaagtcaaccttactcttacaagtctcacaacaattaagtaaaattgatgacaat
gtgctttatgtttcaggtgaggaaagtgctgagcagataaaaatgcgcgctgaacgatta
gattctgaaaataataatttttatgtttatgctgaaacagatatggaaattattaaacaa
actattgagcaactgcgtcctaactatgtagttattgattcgattcaaaccatgatacac
ccagaaattaaaagtgccgcaggaagtgttagccaagtaagagaaacaacagctgagttg
atgcagattgctaagactaaccaaattacgatttttattgttgggcatgtaacaaaagaa
ggctctcttgctggaccaagaatgttagagcatatggtagatacagtcctttattttgaa
ggagagcgtcatcatactttcagaattttaagagctgtaaaaaatcggtttggttcaacg
aatgaaattggtatttttgagatgcgacaagaaggactggttgaagtgaaaaatccttct
gaagcctttttagaagagcgactagcagatgccacaggttctgctattgtctgttcaatg
gaaggaacgcgtccgatattagctgaggtacaagctttaattacaccatcagtttttgga
aatgctaatagaaccgcagcggggcttgatcgtcaccgagtttcactgattatggctgtt
ttagaaaaaagatctggtcttttactacaaaatcaagatgcttatctgaaagcagcaggt
ggtgtgaagttagatgagccagcgattgacttagcgattgctgttagtattgcttcaagc
tacaaagatcaagggacctcacctcatgagtgtttcattggagagattggtttgactggt
gaagttagacgagttaatcgtattgatcaacgtgttcaagaggctaaaaaattaggtttt
aaaaaaatctatgtaccaaaaaataatttacaaggttggaaagtaccaacaggaattgat
ataatcggagtttccacagtttcagagacactgagaaaagtctttaatcaagaagggagg
aaataa
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