Vagococcus fluvialis: K5K99_08805
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Entry
K5K99_08805 CDS
T07851
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vfv
Vagococcus fluvialis
Pathway
vfv03420
Nucleotide excision repair
vfv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K5K99_08805 (pcrA)
03430 Mismatch repair
K5K99_08805 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfv03400
]
K5K99_08805 (pcrA)
Enzymes [BR:
vfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K5K99_08805 (pcrA)
DNA repair and recombination proteins [BR:
vfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K5K99_08805 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
K5K99_08805 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
ResIII
AAA_30
AAA_11
MerR_1
Motif
Other DBs
NCBI-ProteinID:
UDM73043
LinkDB
All DBs
Position
1689726..1691984
Genome browser
AA seq
752 aa
AA seq
DB search
MSHVNSLIKGLNEKQKEAVMHTNGPLLIMAGAGSGKTRVLTHRIAYIIKEKDVKPWNILA
ITFTNKAAREMKDRVVNILGSEGEDVWVSTFHSMCVRMLRRDVDVIGYNRNFTILDSSDQ
LTLMKRILKEENIDPKKYDPRSMISAISNAKNELLTPELYEERYNGFFEKIVATCYKRYQ
KELRQNQSMDFDDLIMLTIRLLQTSPDVLRYYQNKFQYIHVDEYQDTNHAQYTLVNMLAK
RFNNLCVVGDADQSIYGWRGADMQNILDFEKDYPDATTILLEQNYRSTKNILQAANSVIE
NNGNRKKKDLWTDNDEGEKIIYYRGETERDETRFIVGNIQKLVAEQGKKYGDFCVLYRTN
AMSRVVEETFLKANIPYKMVGGHKFYDRKEIRDILAYLNVISNEMDSLSFERIVNVPKRG
IGPGTVQKLRDFAEIHEWSLLHAAIDVDLANITGKARNELAGFGAMMQDFKEMIPFLSVT
ELVEEVLKRSDYKDDLKRQNTLEAHSRLENLDEFLTVTQEFDKRFENGEYDDTEESDSEE
EAPNKLTLFLNDLALVSDIDSLEEGQSQVTFMTLHAAKGLEFPYVFLMGMEEGIFPLNRA
MESEDELEEERRLAYVGITRAEEQLYVTNAFSRTLYGRTQYNRASRFLGEIDEDVITQFG
QENKVTRQSPIGERRVRSTYVQPDVKVVSNKVQTGGEGAAWKPGDKAEHKKWGVGTVVKV
SGSSKDLELDIAFPQQGIKRLLAAFAPITKVD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtaaatagtctaattaaaggcctaaatgagaaacaaaaagaagctgttatg
catacaaatggcccacttttaataatggcaggagcaggtagtgggaaaacaagagtttta
actcaccgcatcgcttatattataaaagaaaaagacgttaagccatggaacattctagct
ataacctttactaacaaagcagcacgagaaatgaaagaccgtgttgttaacattttaggt
agtgaaggagaagatgtttgggtatcaactttccactctatgtgtgttcgtatgttaaga
cgagatgttgatgtgattggttataaccgaaattttacaattcttgatagtagtgaccag
ctaactttgatgaagagaattttaaaagaagaaaacattgatcctaaaaaatatgatcct
cgtagtatgataagtgctattagtaatgcaaaaaatgaattgttaacgccagaactttat
gaagaacgctataatggtttttttgaaaaaattgtagcaacttgttataaacgttatcaa
aaagaattacgtcaaaatcagtccatggattttgatgatttaattatgttaacaattaga
cttcttcaaacaagtcctgatgtcctacgttattatcaaaataaattccaatatattcat
gtagatgagtaccaagatacaaaccatgctcagtacacattggttaatatgttagcaaaa
cgttttaataacttatgtgtggtaggggatgctgaccaaagtatttatggttggcgcggg
gcagacatgcaaaatattttagattttgaaaaagattatccagatgcaacaactattctt
ttagagcaaaattatcgttcaacaaaaaatattttacaggctgctaatagtgtcattgag
aataatggcaatcggaagaaaaaagacctttggacagataatgatgaaggtgaaaaaata
atttattaccgcggagaaactgaaagagatgaaacacgttttatagttggtaatattcaa
aagttagttgcagaacaaggcaaaaaatatggtgatttctgtgttctttatcgaactaat
gcaatgagtcgtgtggtagaggaaaccttcttaaaagctaatattccttataaaatggtt
ggaggtcataaattctacgaccgcaaagaaattcgtgatattttagcttacttaaatgtt
atttcaaatgaaatggattctttaagctttgagagaatcgttaatgtacctaaaagagga
attggacctggcactgttcagaaattaagagattttgcagaaattcatgaatggtcctta
cttcatgcagctattgatgtggatttagctaatattactggtaaggctcgtaacgagtta
gctggttttggagctatgatgcaagactttaaagaaatgattccttttctaagtgtcaca
gaacttgtagaagaagtccttaaaagaagtgattataaagatgatttgaaacgtcaaaat
acgctagaagctcattctagacttgaaaacttagacgaatttttaacagtgactcaagaa
tttgataaacgttttgaaaatggtgaatacgatgacacagaagagtctgattcagaagaa
gaagcaccaaataaattaacacttttcttaaatgatttagcacttgtttctgatattgat
tctttagaagaaggtcaaagtcaagtgacctttatgacgcttcatgctgcaaaaggatta
gagtttccttatgtcttcttaatggggatggaagaagggattttcccattaaaccgggct
atggaatcagaagatgaactagaagaggaaagacgcttagcttatgttggcattacaaga
gcggaagaacaactatacgtaaccaatgcctttagtcgtactttatatggtcgaactcaa
tataacagggcttcacgtttcttaggtgaaattgatgaagatgttattacacagtttggt
caagaaaataaagtaactagacaaagtccaattggagagagacgagttcgctctacttat
gtacaacctgatgttaaagtggtatcaaacaaagtacagacaggtggcgaaggagcggct
tggaaaccaggagataaagctgaacataaaaaatggggcgttggaacagttgttaaagta
agtggttcaagtaaagatttagaacttgatattgccttcccgcaacagggaatcaaacgt
ttattagcagcttttgccccaataacaaaagttgattaa
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