Vagococcus fluvialis: K5K99_10115
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Entry
K5K99_10115 CDS
T07851
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K24072
positive control factor
Organism
vfv
Vagococcus fluvialis
Brite
KEGG Orthology (KO) [BR:
vfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vfv03021
]
K5K99_10115
Transcription machinery [BR:
vfv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K5K99_10115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_23
GerE
UPF0122
HTH_17
DUF134
HTH_36
HTH_29
HTH_Tnp_4
HTH_10
HTH_Tnp_ISL3
DUF6362
HTH_28
HTH_7
HTH_Mga
Destabilase
AcrIC5
Motif
Other DBs
NCBI-ProteinID:
UDM73280
LinkDB
All DBs
Position
complement(1947119..1947622)
Genome browser
AA seq
167 aa
AA seq
DB search
MTDNELIINSYKSTLSNLRARYKVMDLEHPDKKTISGMISSLEYSLFWLKNGHEKPPNRE
ISQRSYEQRTEYWADVSLVTQYHKDAVVLIGGEDIDELKPSQIETIDNALKLLTDKEQQT
FINIYANSHTYQQVADLYGCSKGTVQSYINRAKKKISIAIKEGAISH
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
ttgactgataatgaacttattattaattcatataaaagtaccctctcaaatctgagagca
agatataaagtaatggatctggaacatcctgataaaaagaccataagcggcatgatttca
tctcttgaatattcactcttttggttaaagaatggtcatgagaagccaccaaatagagag
atatctcaacgctcctatgagcaacgaactgagtattgggctgatgtgtctttagttact
cagtatcataaagatgccgtggttcttattggtggggaagatatagacgaattaaagcca
tctcaaattgaaacaatagataatgctttgaaattacttactgataaagaacaacaaact
ttcattaatatttatgccaatagtcacacttaccagcaagtagcagatttatacggatgt
tcaaaaggaacggtgcagtcgtatattaatagagctaagaaaaagataagtatagcgata
aaagaaggtgcaatatcacactga
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integrated database retrieval system
