Viruses: 10192216
Help
Entry
10192216 CDS
T40000
Symbol
RHVP.25
Name
(RefSeq) Cricetid gammaherpesvirus 2; major capsid protein
Virus
1605972
Cricetid gammaherpesvirus 2
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_MCP
STPPase_N
Phyto_Pns9_10
Motif
Other DBs
NCBI-GeneID:
10192216
NCBI-ProteinID:
YP_004207861
RS:
NC_015049
UniProt:
E9M5K8
LinkDB
All DBs
Position
NC_015049:46706..50830
Genome browser
AA seq
1374 aa
AA seq
DB search
MAGPSVDLRHLPYVVTDANLTHNIKQSAAEGLFKSFQLLVGKDARENAVKFEALLGVYTN
AVQFVKFIETGLAISCVNTEFKDLRKMVEGKIQFKVSIPTIAHGDGRRPNKQRQYIVMRA
CQKYHITAEIELSTEDIQLLFAEHETPLDFTEHVGAIKTITHALQFGVDALERGLINTVL
HAKLRNAPPAFILRAINNPNIAQRPSTKASRADIISLFKKELLENSFFLDTAATMPRPKD
YVLSILSNVIGAVANESVFRSISQHTTEGGETIFGVLETTDSVMRRLIALIGQAYDKVRA
PASYANYVVRGGNVVTAVSYGQVMKNFDSFLARLIDGSGNSMEADFSDYNNMNSREEMLE
RSLVPVPTIRVGERVVAVESLQRMYREAQDPYPLARSIQYTYYFPVGLFLPSPRYSTSQA
LRGLEIASPPTDAWIMNKNNLLLCFGYQTALRSICHPRMHTPVPTIQVLDAQPANPAMRP
RHNYGVRSIAPNTMNLYRIIYMYYNYRQPEVSDIARKSQMPPEELFGHGAVDQLMLELHP
LFDFFRELNLDGNVAHRASHRVHVGNIPKALAPADFQEGRGHQFETATGMSHVIDASTME
VIQETAFDPSYPPMCYLMEACIHGQEEKFILNMEFIALIIETYWTTSGHLAFVNNFYMIK
YICKHMGAGMIRKEIYTAYRKIMGELMTMANALLVIGGHERVAQMPVAEMISSLLDSALP
PPVAYNNIFNELLGNEHRNVRARVGERILPRAQLMNLIRIIESMEDAADEFNDLYNARRL
HNPDNGIALQLGPDTQADVLMEKLFYYVFLPVCTNGHMCGMGVIYENLENTVAFNEAVFM
GGANGNDQAMRYLRPGALRDILVASEIRPTIAMLRMLTTCLLTFPFSSQLVRIAADKDYG
QNIAADVPGTRIQQSVLVNGFVGFFFSEKSKQLLQNIFYPVPFHKFYSDPSVAATMMPAI
AEYLANNPGQKNGVVFNVPPQLMAEYEEWHRSPMLAYVLQCDPAPAALSALLAMHLKLSP
VGFISMARSKIHPGVAMTVVRTDEVLSENVLYSSKASTSVFIGRPVVNRREARTDAVTFD
INNELASLDTSMGYNSTIIPATATAVTTDMGIHCQDLFGMYPTDAFRQREFHNYVKQKAG
ADGTAPAPVRDPLIFMAGDGHRSDMPGLYHGQVATCEVILTPVTADVAYFQSPNSPRGRA
GCVVSCDTYSPDNAVKLLYDHSLPDPAYEFRATNNPWASQAGSLGDTLYNNVNRQLVTPG
MYSPCRQYFNRDQLLKNNKCLHTLVGEYSSRIGGSPATSNTDIQYVLVNGTDVFLDQPCL
LLQEAYPTLSASHKGLIDELMSHKKTHAPVHHGQYLLEEVAPLKRVLKIGNKVV
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaccttcagttgacctcaggcatctcccttatgtggtaacagatgccaacctg
actcacaatataaagcaatcagcagcagaggggctgtttaaaagttttcagctgcttgtg
ggaaaagatgccagggagaatgcagtaaagtttgaggctctcttgggggtatacaccaat
gcagttcaatttgtgaaattcatagaaactggactggccatatcatgtgtcaacacagag
tttaaagatttaaggaagatggttgaaggaaaaatacagttcaaggtgtcaatacccacc
atagcccacggggatgggagaagaccaaataaacaaaggcagtacattgttatgagggca
tgtcaaaaatatcacataactgctgagattgaactctccacagaagacattcagctcctc
tttgctgaacatgaaactcccttagactttacagaacacgtgggggccatcaagaccata
acccatgccctgcagtttggggttgatgcgctggagaggggacttataaatacagtgctg
cacgcgaagctcagaaatgcccctcccgcctttatacttagagcaataaataatccaaat
attgcccagcgaccatctaccaaggcatcaagggctgacataatatccttgtttaaaaag
gagctcttggaaaattcattctttttggacactgcggccacaatgcccagaccaaaggat
tatgttttaagcatcctttcaaatgtcattggagcagtggcaaatgagtcagttttcaga
agcatcagccaacataccacagaagggggtgaaaccatttttggggtcctagaaaccaca
gattctgtcatgaggcggcttatagccttgattggtcaagcctatgacaaggtcagagcc
cctgcctcgtatgctaactacgttgtcaggggaggcaatgtggtgaccgcagtcagctat
ggccaggtcatgaaaaattttgatagttttctggccaggctgatagatgggtctggtaat
tccatggaagcagatttcagcgattataataacatgaactccagggaagagatgctggaa
agaagcctggtcccagtaccaacaatcagagtgggggaacgagtagtggcagtggaaagc
ctccagaggatgtatagagaggcccaggatccataccctcttgcaagatctatccagtac
acctactatttcccagttggcctgtttctcccttcccccagatattcaacgtcgcaggcc
ctgcgaggcctggagattgcttcgcctcctacagatgcttggatcatgaataaaaataac
ctgctgctgtgctttggctaccaaacagccttgagatccatctgccatcccagaatgcac
acccctgttcccaccatacaggtgttggatgctcagccagcaaatcctgccatgcggcct
cgccacaactatggggttcgatcaatagcccccaacacgatgaacctgtatagaattatt
tatatgtactataactataggcaaccagaggtttcagacattgccagaaaaagccagatg
cctccagaagagctgtttggtcatggggcagtagatcagctgatgttggaactgcatccc
ctctttgactttttcagggagttaaacttggatgggaatgttgcccaccgtgcctcacac
agggtacatgttgggaatatacccaaggcattggcaccagctgacttccaagaggggagg
ggacaccaatttgaaactgcaactggcatgtcacatgtcatagatgcatcaaccatggag
gtgattcaggagactgcgtttgacccatcttatccgcccatgtgctaccttatggaggca
tgtattcatggacaagaggaaaaatttatcctcaacatggaatttattgcactgattata
gaaacctattggaccacatctgggcacctggcatttgttaataatttctatatgataaaa
tacatatgcaaacacatgggagctggcatgattaggaaggaaatatacacagcctacagg
aaaatcatgggagaactaatgacaatggctaatgctctactagtcattggcggccatgaa
agagttgcacagatgccagttgcagagatgatttccagcttactcgattctgctcttccg
cccccagttgcatacaataatatttttaatgaactgcttggcaacgagcacaggaatgtt
agagccagggtgggggaaagaattcttccacgtgcccagctaatgaatttgattagaatt
atagaatctatggaagatgctgcagatgaatttaatgacctctacaatgccaggagactg
cataatccagataatggcattgccctgcagctgggacctgacacacaggcagatgtcctc
atggagaaacttttctattatgtattccttccagtatgcactaatgggcacatgtgtggc
atgggagtcatctatgaaaatctggaaaatactgtggccttcaatgaggctgtttttatg
ggaggagctaatggcaatgatcaggccatgagatatttgaggcccggggctctgagagat
atcttggttgccagtgagattaggcctactattgcaatgcttaggatgttgactacatgc
ctgctaacatttcccttttcatctcaactggtgaggatagcagcagacaaagactatggg
caaaacattgcagcagatgtcccaggaaccaggatacagcaatctgtgctggtcaatggc
tttgttggattctttttctctgaaaaaagcaaacagcttcttcaaaatatcttctaccct
gtcccatttcacaagttttattctgacccttctgtggcggccaccatgatgcctgcaatt
gcagaatatttggcaaacaaccctggacagaaaaatggggtggtttttaacgtacctccc
cagctgatggcagaatatgaagagtggcacagatcacccatgctggcctatgtactgcaa
tgtgaccctgcccctgctgccctcagtgctttgttggccatgcaccttaaattgtctccc
gtggggtttatatctatggcaagatccaagatacatcctggagtggccatgacagttgtg
aggaccgatgaggtcttatctgaaaatgtcttgtacagttcaaaggcatcaacttctgta
ttcatcggaagaccagttgtgaacaggcgggaggccagaacagatgcagtcacattcgat
attaacaacgagctggcctcattggatacatccatgggctacaactctaccataattccc
gccacagctacagctgtgactacagatatgggaatccattgccaggacctgtttggaatg
tacccgacagatgccttcagacagagagagttccataattatgtcaaacagaaagctgga
gccgatggaacagcgcccgccccagtcagggatcccttaattttcatggcaggtgatggg
cacaggagtgatatgcctggcctgtaccatggacaagttgccacttgcgaggtgatcctt
accccagtaactgcagatgttgcttactttcagagcccaaacagtcccaggggacgggct
ggatgtgtagtgtcatgtgacacttacagtcctgacaatgctgtgaagctgttatatgat
cacagccttccagaccccgcatatgaatttagagccaccaataatccctgggcgtcgcag
gctgggtcccttggagacacattgtacaacaatgtcaacagacaactcgttacccctggc
atgtatagcccatgcaggcaatattttaacagggaccagcttctgaaaaacaacaaatgc
ctacataccttagttggcgagtattcatctcgcatcgggggctcacctgctactagtaac
acagatattcagtatgtgttggtaaatggcacagacgtgtttctggatcagccctgtctc
ttactgcaagaagcatacccaactctatcagccagccataaagggctgatagatgagctc
atgtctcacaaaaaaactcatgctcctgtacaccatgggcagtatctgttggaggaagtt
gcgcccctaaaaagagtattaaagattggaaacaaggtggtataa
DBGET
integrated database retrieval system
