Viruses: 10327479
Help
Entry
10327479 CDS
T40000
Symbol
gp46, SSM1_149
Name
(RefSeq) Synechococcus phage S-SM1; SbcC-like subunit of palindrome specific endonuclease
KO
K27519
Kyanoviridae SbcC-like subunit of palindrome specific endonuclease
Virus
444859
Synechococcus phage S-SM1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
FtsK_SpoIIIE
AAA
AAA_27
nSTAND3
NPV_P10
Motif
Other DBs
NCBI-GeneID:
10327479
NCBI-ProteinID:
YP_004323040
RS:
NC_015282
UniProt:
E3SIF6
LinkDB
All DBs
Position
NC_015282:121152..122873
AA seq
573 aa
AA seq
DB search
MIIFESIRWKNFLSTGDQWTEIDLNEYSSTLIVGTNGAGKSTMLDALCFGLFNKPFRKIN
RGQLVNSINEKSTKVEVCFSIGKDEYRVFRGIKPNVFELYKNNKLVDQDAAAKDTQKYLE
QSVLKLNFKSFTQVVILGSSTFVPFMQLPAAHRREVIEDLLDINIFSNMNQLLKDRVRTA
QSQSNDCTHLLNIAEERVESQERLIQSLAQVNTSRQQEKEDKIKTNLESIESVKAEKEKY
ELQLIKEESNLVGVDNHKELLTSLRQTQSDTNSELKSAAKELKFFKTHDECPTCSQQIEK
EFKNAAIGGLEQKGKKLTKEIKSLTEQINDTVTVIEQMDAISKQCFETRNKITRSEREIV
RLEFENLNLKDELIKLQTDTPNMDKEKESLVSFQNDLETTKTDCGKISQTLDEYRVVSNL
LKDSGIKSQIIKKYVPIFNNLINKYLHSMDFFVNFTLDEEFGEVIKSRFRDEFSYSSFSE
GEKQKIDLALLFTWREVARMKNSVATNLLILDEVFDSSLDASATGELLSILRSLGNDANV
FVISHKGDILVDKFLRTIKFEKVNDFSKMSDDS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgattatttttgaaagtattcgttggaagaattttctttcgacaggtgaccagtggact
gaaattgatttgaatgaatatagttcaactctaattgttggaactaatggtgcagggaaa
tcgactatgctcgatgccctgtgttttggtttgttcaataaaccctttcgtaaaatcaat
agggggcagttggttaatagtatcaatgaaaaatcaactaaagtagaagtttgtttttct
attggtaaagatgagtatcgtgtattccgaggaatcaaacccaatgtctttgaactttat
aagaacaataaactggttgaccaggatgctgctgccaaagacactcagaaatacttggag
caatcagtcctcaaactcaatttcaaaagttttactcaagttgtcatattgggatcatca
acttttgtccccttcatgcaactcccagcagctcaccgacgagaagttattgaagatcta
ctcgatatcaacatcttctcaaacatgaatcagttgctgaaggatagagtccgaacagca
cagagtcaaagtaatgattgcactcatctgctcaatattgcagaagaaagagttgagtct
caagaacgactgattcagtctctcgctcaggtaaatacttctcgtcaacaagaaaaagaa
gataagattaaaactaatttagaatcaattgagtctgtaaaggcagagaaagaaaagtat
gaactgcagttgatcaaagaagagtctaatcttgtcggtgtcgataatcataaagaactt
ctgaccagtcttcgtcaaactcaatcagatactaattctgaattgaagtctgctgcaaaa
gaattgaagtttttcaagacacatgatgagtgtcctacttgctctcaacagattgaaaag
gaattcaagaatgcagcgattggtggtctagagcaaaagggtaagaaactcactaaagaa
atcaagtctctgacagaacagatcaatgatactgttactgtcattgaacaaatggatgcc
atttcaaagcagtgttttgaaaccaggaataaaattactcgtagtgaaagagaaatcgtt
cgtttggagtttgaaaatctcaatctgaaagatgagttgattaaactacagacagatact
cccaatatggataaggaaaaggagtcactcgtctcgttccagaatgatttagaaacaaca
aaaactgactgtggtaagatcagtcaaacactagatgaatatcgagttgtatcaaatttg
ctcaaagattctggtatcaagagtcagattatcaaaaaatatgttcctattttcaataat
ctgattaataaatatcttcacagtatggacttctttgtcaacttcacgcttgatgaagag
tttggtgaagttattaaaagtagattcagagatgaattttcttattcatcgttttctgaa
ggtgaaaagcaaaagattgacctagcacttttattcacttggcgtgaagttgctcgtatg
aagaatagcgttgctactaatcttttaattcttgatgaagtatttgatagttcactcgat
gcttctgctacgggagaacttttgtcaatccttcgtagtcttggtaacgatgcgaacgtg
tttgtcatctcacacaaaggtgacattcttgtagataaatttttaaggacgattaaattt
gaaaaagtcaacgacttctcaaaaatgtctgacgattcgtaa
DBGET
integrated database retrieval system
