Viruses: 10329104
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Entry
10329104 CDS
T40000
Symbol
Syn1_216
Name
(RefSeq) Prochlorococcus phage Syn1; virion structural protein
Virus
444861
Prochlorococcus phage Syn1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
End_beta_barrel
Motif
Other DBs
NCBI-GeneID:
10329104
NCBI-ProteinID:
YP_004324582
RS:
NC_015288
UniProt:
E3SPU6
LinkDB
All DBs
Position
NC_015288:complement(170257..173583)
AA seq
1108 aa
AA seq
DB search
MARKSIKTNYYLFDASAREVVIPGGIQREQLVLITNVTDNKVIYNFSDPELTATEYQIST
DIRNVVTTKIVLTYDTTSMSDTDRLQIIYDDFEETMKPAETYMDSVNKQRVSTPQSQIDT
DFEYGIQNTKWESVAMINNNPFAYRSETPLSVTQIEAFQNSKTVRVSVNVVETPLPDVGT
AIFIQDTIHDGANGVFIIDSRNSSQNTFNYTAKYEWSSADSDIQILARTAVYTGILYTGS
EIGGTITLSAPGDGQVRVTCTNAHGLEVGNEVAITGSAGTNVNGSWIVATVISPTVFDYY
PPASPTGSVATGTIKLYPRPQGSSVHRAFDGGVKFSTNSNSKNQQAIRQTKRYFRYQSGK
GVAFSTGSILAPAIENIDEISSSGTTITVVSAVAHNITRDTVIKVQGVDDNVYNGNFQVS
NIIDPYTFEYNTLVAPSTTIASGSYTVSPIGASGVRLEIGMMDQQNGLFFRHANGNTSLV
RRSSTQQLSGRATVTFGNSLISSYTGPNQQGTKFAKQLKVGDYIVLRGSSYRVDGIISDT
QMVIYPDYRGPSAINVPITKTVETEWQQSEWNIDRCDGTGKSGYSLDVTKMQMLYMDYSW
YGAGFIRWGFRGEDGDVIYVHKIPNNNFNSEAYMRSGNLPARYEVNTICPQGTVTKSFSN
SDSIIYVDRPPFGFPNEGTLRVRQTTSATAANTEYINYTGTTKFQQDVISTVAGNNSIVV
SDTTGLQSNGVQTITFDRPFANIVAGKAYYVASIISSTAFSITESAGTSNAITLTEQTGS
QLSPLAVALSGAFTGITREQAGSLNGVTLTGNSGQSTVTVSSSTGIQKGQRVVGTGVPDD
VFVQNINGSQVFLSKAVTANNPSGVIFPPLGSGSASAFTYSATQPISLELIQATSVPQIS
HWGSSVIMEGEYDDDRAYVYTIGTRRGAKIASGQTKGLLALRVAPSVDNGIPGNFGTREL
INRIQLVMRSAEFSASGAMYVELVLNPGISTTLPWENIGGTSLAQYCDIGAVRTGDDITT
GLVGGEVIFGFYADNGISKYDLDVVKEISNSILGGGSDNFQFSTAPNPTGYFPDGPEILG
VRATNITGGRGNNAIIADAKLSWTEAQA
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaaatccattaagacaaactactatctttttgatgcttcagcaagagaggta
gttatccctggtggtatccaaagggaacagttagtcctgatcacaaacgttacagataac
aaagttatctacaatttttcggacccagaacttactgccactgagtatcagatctctact
gatattcgtaacgttgttacgacaaaaatagtcttgacatatgatacgacaagtatgtcg
gatactgataggttacaaattatctatgatgactttgaagagacgatgaaaccagcagag
acctacatggactctgttaacaagcaaagagtttctactcctcagtcacagattgatact
gacttcgagtatggtattcagaataccaagtgggagtcagttgcaatgattaacaacaac
ccatttgcttatagatctgaaactcctttatcagtcacacagatcgaagcatttcaaaat
agtaaaactgtaagagtttctgtcaatgttgtagaaactcctctgcctgacgttggcact
gctatctttattcaagatactatccatgatggtgccaacggagtcttcatcattgactct
cgcaacagtagtcaaaatactttcaactatacagcaaagtatgaatggtcttctgctgat
tcagacattcagattctagctagaactgcagtatacactggcatcctttatactggatct
gaaattggaggaactattacactatcggcacctggagatggtcaagtaagagttacctgc
actaatgcacatggtctagaagttggtaacgaagttgctataactggatctgcaggaaca
aatgtcaatggctcatggattgttgctactgtaatctctccaactgtatttgactactat
cctcctgcatctcctactggttctgttgcaacaggaactatcaaactatatcctagacct
caaggttcatctgttcacagagcatttgacggtggtgttaagttctccactaattcaaat
tccaaaaaccaacaggcaatcagacagacaaaacgttacttcagatatcagtctggcaaa
ggtgtagcattctccactggttctatccttgctcctgctatcgagaacattgatgagatt
tcatcatcaggaactactattactgttgtcagtgcagttgcacacaacataactagagac
actgttataaaagttcaaggagtagatgataacgtatacaacggtaatttccaagtatcc
aatattattgatccttatacatttgaatataatacattggttgcaccatcaacaacgatc
gcttctggatcgtatacagtatcacctattggtgctagtggtgtcagactagaaattggc
atgatggatcaacagaatggtttgttcttccgtcatgctaatggtaacaccagtcttgtt
cgcagatcatcaacgcaacaattgtctggaagagcaacagtaacttttggaaactcttta
atctctagttacactggtccgaaccagcaaggaactaagtttgcaaaacaactgaaagtt
ggagactatattgttctccgtggttcttcttatcgtgttgatggtatcatttcagatact
cagatggttatttatcctgactatcgtggaccatctgctatcaatgtccccatcacaaag
actgtagaaaccgaatggcaacaatctgagtggaacatcgatagatgtgatggaactggt
aagtctggttactcactagacgttaccaaaatgcagatgctatacatggattactcctgg
tatggtgctggtttcatccgatggggattccgtggtgaagatggtgacgttatctatgtt
cacaagattcctaacaacaacttcaattctgaggcatacatgcgttcaggtaacctacct
gctcgctatgaagttaatactatttgtccacaaggaactgtaaccaaatcattctccaat
tctgacagcataatctacgttgacagacctccatttggtttccctaatgaaggaaccctt
agagttagacaaacaacatctgctactgctgctaatactgagtatatcaactacactgga
actaccaagttccaacaggatgttatttctactgtagcaggcaacaattctattgttgtt
agtgacacaactggtctacaaagtaatggtgttcaaactattacatttgatagaccattc
gcaaacattgttgcaggaaaagcatactatgttgcatctattattagttcaacagcattc
tcaattactgaaagtgctggaacatcaaatgctatcacactaactgagcaaactggttct
caactatctccactggcagttgcactatcaggtgcattcactggaatcactagagagcaa
gcaggaagtttgaatggtgtaaccctaactggaaatagtggacaatctactgttactgta
tccagttcaactggaattcaaaaaggtcaacgtgttgtaggaactggtgttcctgatgat
gtatttgttcaaaatattaatggttcacaggtttttctaagtaaagcagtcactgcaaat
aatcctagtggcgttatcttccctccactaggttctggtagtgcatcagcatttacatat
tctgctactcaaccaatttcattggaactaatccaagcaacttctgttccacagatcagt
cactggggttcatcagtcatcatggaaggtgagtatgatgatgaccgagcatatgtttac
acgattggaacacgacgtggtgcaaaaattgcaagtggacaaacaaaaggtctactagca
cttagagttgcaccttcagttgataatggaattcctggtaactttggaaccagagaactt
atcaatagaatacagttggttatgagatctgctgagttctctgcatcaggtgctatgtat
gtagaactagttctcaaccctggcatctcaactaccctaccatgggagaacatcggagga
acatcacttgcacagtattgtgacattggtgctgtcagaactggtgatgatattacaacg
ggactagttggtggtgaagttatctttggattctatgcagacaatggcatctccaagtat
gatctagatgttgttaaagaaatctctaactctatcctaggtggaggttctgataatttt
cagttttcaactgctcctaatcctactggttacttcccagatggtcctgagattctagga
gttcgtgctaccaatatcactggtggtagaggcaacaacgctatcattgcagacgctaaa
ctatcctggacagaagcacaggcataa
DBGET
integrated database retrieval system
