Viruses: 10446908
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Entry
10446908 CDS
T40000
Symbol
P2, CLRVsRNA2_gp1
Name
(RefSeq) Cherry leaf roll virus; polyprotein 2
Virus
12615
Cherry leaf roll virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Nepo_coat_C
Nepo_coat
Nepo_coat_N
Ribosomal_L16
Motif
Other DBs
NCBI-GeneID:
10446908
NCBI-ProteinID:
YP_004382747
RS:
NC_015415
UniProt:
F4NCE3
LinkDB
All DBs
Position
NC_015415:12..4781
Genome browser
AA seq
1589 aa
AA seq
DB search
MVKPVVFSNGESVLPKALISEAREVAAFLKSTRNPAGFWVTFVAQGTSLSVSQVALCAIN
GIVCRQSVESHSNGPSAVAFWSALRARLRSFLKGHGRWVTSLLAKTTEAFEAQDLCRYQR
QRTAYLARGAVLRAKALRKRKTALRKERAAQLAQRQLEGERRAAARLVRETRKGLQILRC
KLAALFSPPPPFPTTEWAWESLPSSPLPTYWEFFSDATSVARTPSRGATLLSALPEGVDS
FLPSSFPRRMTLQSAQTTKGSFGLVLRRMILKAVAAQRSFLAAFYNYFFKREDVIAEEKS
SISEVPAEDDPYAGFDHWGAYSAFLSSVLPFPTLRVGKFHSAGNYQYCARASTCAEMDMH
LHSLFEECKECRMGAGPPSQGFSPLFREPLNRGRLFLAALPERLVLPDLQMHLHSFFDEC
TCYAGHVADTLNYRVPSTRDCAVVAKRTGVAIKHVHALLSCWDRILEIPSVRPPLFERGW
RKSVKSICTAHALWAQSQVSSCEPMDMDVHSLFCECAECEINSSHPPLGSKSISLSGPPT
LFSSRPRYSLPKYAGNSLVYTPDKCVHCKNEAELPVSVAEREAYLTITGKYGVCLCGGPR
IVKTLQPSSVYTYAKRCGWKFLNPVRYHYATYEEDYLCFMRALDALQASFVIEQPRSKIE
IRGLLRYVVRAPAPPIEDEDLFLDAPSYLPAQSGIGANVQTLHQREPSGTEQTPFQGASR
PLGASDGAVATQAPFRQEARQRWLGRRAHDLESQEDRIRKIADSQGISYASARAAYGAPD
EAVPSQAPILPRLDEAYTRDSVVPRFLLGRTASTRAQRTVDVVLASPSVDKENHTATFYF
NPVSQQEIDRMKSSGNTMVSIDAVEIAIDPVGMPGDDTDLTVLVMWCQNTDPQRAILGAL
STFVGNGLARCVFYPGLKLMHQHCSAPDGRVLKVMVSSTNSTLIGGLPQAQVSIGTLRQH
IGPGHDRTISRALATAQVQGYNVRAVQQGNATVFAPQGGHVEGTPSADLQMGAGETLVQT
GGTHWKLQRSASSRFVVEGTSRTVGPRRMADVRVDRGDFPDQGARGQQQPPVNMPLQSGI
LPGMHWSAATSFKCAAEAAENSILARWSLRSIISESGTDAWIKWQREQRSTFLVEGTIAM
SVNIMAGTTLGLVCDAFNRAKHLDNFPSALGQNMPQKVFPLSNPLERNFSFSMSELLGYT
MHPHASAYEDVQFILYVLNTNDVACAAEWGGHILWQVKDDAAEPYELQLPVVPKDGARLD
VWRGPATMSQGLFPYTTNANLGFAEPRSVLTGYAPITSFHQAALSYYISYGGTIHGRLVK
IGSGLVQVDIALAMWHECADMVSYRGIIKIPHVLLRGGEGEFALPINAPFGYTSTRDRGP
TLAVCLVSGVVAPKDCSAPYRYMIYFDRVEFNAQLPPVIANRLQFLWASFSEFKPVVPAS
NRTWMIPCRLSDYKVEGATIKMEAHPLARLVASAGMFQGTMRFILRWTFSNTLNTPTTYV
QLTHKFGTATVNESYLTKLAHASQATEISIDVVVAGLGGFMRSGVAESRENFVAVSLSKP
GDLAKLDIIIELMPGFRFRGPTITPLVRV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagcccgtagtgttctcaaacggcgagtccgttctacccaaagccctcatttct
gaggctagggaggttgcagccttcctaaagtccaccagaaaccctgcaggtttctgggtt
acgttcgttgcgcagggtacctccctgtcggtttcccaggtggctctttgtgccatcaat
ggcatcgtgtgccgtcagtccgtggaatcccattccaacgggccatcggccgttgccttc
tggtccgctttgcgggccaggcttaggtcctttttgaagggccatggtcggtgggttacc
agcctactggccaaaaccactgaggcctttgaggcccaggatctctgccgttaccagcgg
cagagaactgcgtacctcgctaggggtgcagtcctaagggccaaggcccttaggaagaga
aagactgctctccggaaggagagggcagcccagttggcgcagcgccaactggaaggtgag
cgccgggcggctgcccggctggtgagggagacccgcaaggggctccaaattttacgctgc
aagcttgcagcgctcttctccccccctcctccctttcccaccactgagtgggcttgggaa
tctcttccttcctcccccctcccaacttattgggagttcttttctgacgccacttcggtg
gcgcggacccctagcaggggggccaccctgctctccgcccttcccgagggcgttgattct
tttctcccatcctccttccccaggaggatgactttacagtcagcccagactacaaagggt
tccttcggattggtcctccggaggatgattttaaaagctgtagcagcacagcgttctttt
cttgctgccttctacaattacttcttcaagcgagaggacgtgattgcggaagaaaaatcc
tctatctctgaggtgcctgctgaggatgatccatacgcaggctttgaccactggggagct
tattctgcttttttatcgagtgtgctcccctttcccaccctaagggttggaaaattccat
agtgctggtaattaccagtactgtgcgcgcgcttctacgtgcgctgagatggatatgcat
ttgcattctctttttgaagagtgcaaggaatgccggatgggcgccggtcctccatctcag
gggttttccccccttttccgcgagccccttaataggggtaggctgtttctcgcagccctc
cccgagcgtttggttctaccggacctgcaaatgcacttgcactctttttttgacgagtgc
acttgctacgcggggcatgtggccgataccctcaattatagggtaccttccactcgggat
tgcgctgttgttgctaagagaacgggcgtggccataaaacatgtccacgccctcctctct
tgctgggatcgcattttagagatcccctcagtgcggccacccctttttgagcgtggttgg
cgcaagagtgttaagagcatatgcactgctcatgctctttgggcccagtcccaagtttct
tcttgtgagcccatggatatggatgtgcattcactattttgtgagtgcgctgaatgtgag
ataaattcctctcaccctccactgggctctaagtccatatctctgtctggaccacctacg
ctttttagtagtaggcccaggtattctcttcccaaatatgctgggaattctttagtgtac
acacctgacaagtgtgtgcattgtaaaaacgaggcagagctaccggtgtcggtagctgag
cgcgaagcctacttgaccattacgggcaagtacggcgtatgcctctgcggagggccaaga
attgttaaaactcttcagccttcctccgtctacacctacgctaagcgctgtgggtggaaa
tttttgaatcctgtcaggtaccactacgcgacctatgaagaagattatctctgcttcatg
cgcgcactggatgccctacaggctagttttgtgatagagcagcctcgctcaaaaattgaa
atacgaggccttcttcgatacgtggtgcgagctcccgcaccccctatcgaagatgaagat
cttttcctagatgcgccttcatacttgccggcgcagtctgggataggagccaacgtgcaa
actctccaccagagagaaccaagtggaactgaacaaactccttttcagggagcgagtcga
ccacttggtgcgtctgatggggctgtggccacacaagctcctttccgccaagaggcacgc
caacgctggttggggagacgtgcccacgacctggagtcccaggaagaccgcattcgcaag
attgcggactcccaaggaatctcatacgcatccgctagggctgcgtatggagctccagac
gaagctgtgccctcacaggcaccaattttgcctcggttagatgaggcctatacaagagac
tcagttgtgccccgctttttattagggcgtacagcttcaacgcgtgcacaacgcaccgtt
gacgtggtcttagcatcacccagtgtggataaagagaaccacactgccactttttatttc
aaccctgtgtctcagcaggaaattgatcgcatgaaatctagtggcaacaccatggtttcc
atcgatgcagttgagatcgcgattgatccggttggtatgcccggagatgatacagatctc
actgtgttggtgatgtggtgtcaaaacactgacccacagcgtgcgattcttggtgcttta
tccacttttgtgggcaacggcttggcccggtgtgttttttatccaggcttaaagttgatg
caccagcactgtagtgctcctgacggccgtgttttaaaggtcatggtctcgagcaccaat
tcgactttgattggagggctgccccaggcccaagtgtctataggcaccctccgacaacat
ataggccccggtcacgataggacaatatcaagggcccttgcgactgcacaagtacagggt
tacaatgtgcgtgcagtgcaacaaggaaatgcgactgtcttcgcgccccagggaggacac
gtcgaggggacccccagcgctgatttgcaaatgggggccggtgagactctcgtgcaaacg
ggtggcactcattggaaattgcaacgatcggctagcagtcggttcgtcgtcgaggggacc
tcacgtacagtgggaccacgacgcatggccgacgtgcgtgtcgatcggggtgacttcccc
gatcaaggagccagggggcaacaacagccccccgtaaatatgcctttacaatccggtata
ttacccggaatgcattggtctgctgccacatcttttaagtgtgcggcggaagctgccgag
aattccatcttggcacgttggtccttgcgctcaattattagcgagagcgggaccgatgca
tggattaagtggcaacgcgaacaacgttccacttttcttgtggagggtactattgccatg
tctgtaaatattatggctggtactacgctaggtctagtgtgtgacgcttttaatagggcg
aaacacctagacaattttcctagcgctctggggcaaaatatgcctcagaaagttttcccc
ttgagcaatcctttggagagaaattttagcttctccatgagtgaattgttggggtatact
atgcatccccacgcttctgcgtatgaggatgtgcaatttattctttatgtcctcaacaca
aatgatgtcgcgtgcgcggcagagtggggaggacacattctttggcaagtgaaggacgat
gctgcagagccctacgaactgcaattaccggtggttcccaaggacggagctcgtctggat
gtctggcgcggccctgctactatgtcgcagggtttgtttccgtacacgaccaatgctaat
ttaggcttcgccgagcctaggtctgtactgacggggtacgccccgataacctctttccac
caggcggccttatcatactatatttcgtatggtggaaccatccatggccggttagtcaaa
atcggttctggactagtgcaagtggacattgcactagccatgtggcatgaatgtgccgac
atggtgagttatagggggattattaaaatccctcatgtcctgctcagaggtggcgaggga
gagttcgcgctccccatcaacgccccttttgggtatacttccacgagagatcgcggacct
acattggccgtgtgtctcgtgtctggtgtagtggcgccaaaagattgctcagccccctat
cgttacatgatatattttgatagggttgagtttaatgcacaactgcctcccgtgattgcc
aatagattgcaatttctttgggcatcattttcggagtttaaaccggttgtgcctgcctcc
aatcgcacctggatgataccttgtcgcctttcggactacaaggttgaaggtgcaaccatc
aaaatggaggcacatccacttgcccgcttagtagcgtctgcgggtatgtttcaaggtacg
atgaggttcatcttgcgatggaccttttcgaatactttaaatacgcccactacttatgtg
cagctaacgcataagtttgggacggccactgtcaacgagtcgtacctgacgaagttggca
cacgcctctcaagccaccgagattagtattgacgtggtggttgcggggcttgggggcttc
atgcgctccggggtggccgaaagtagggagaactttgttgctgtctcccttagtaagccg
ggtgacttggcaaagctcgatataattatagagctaatgcctggctttaggtttaggggg
cctaccataacccctcttgtacgcgtttag
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