Viruses: 10526597
Help
Entry
10526597 CDS
T40000
Symbol
L, LGMTSG_sL_gp1
Name
(RefSeq) Groundnut ringspot and Tomato chlorotic spot virus reassortant; L protein
KO
K26280
Tospoviridae RNA-directed RNA polymerase L [EC:
2.7.7.48
3.1.-.-]
Virus
1027232
Groundnut ringspot and Tomato chlorotic spot virus reassortant
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Bunya_RdRp
L_protein_N
Motif
Other DBs
NCBI-GeneID:
10526597
NCBI-ProteinID:
YP_004421860
RS:
NC_015469
UniProt:
F5B5Y3
LinkDB
All DBs
Position
NC_015469:complement(218..8842)
Genome browser
AA seq
2874 aa
AA seq
DB search
MNIQKIRKLIENGTTLLLSIEDCVGSNHGLALDLHKRNSDEIPEDVIINNNAKNYETMRE
LIVKISTDGEGLNTGMATVDVKKLNELVSLFEQKYLETELSRHDLFGELVSRHLRIKPKQ
RSEVEIELALRDYLEELNKKQCINSLSNDEFERINKEYVATNATPDNYVIYKESKNSELC
LMIYDWKISVDAKTETKTMEKYYKNIWKSFKDIKVNGKPFLEDHPVFITIVILKPMGGMP
ITVTSSRVLGKYEDSPSALHGERSKLAKNAKLLNIYHVGMIVGTTPTVVRNYYANTQKLK
SEVRGILGDDFGSKDVFFSHWASKYKDRNPTEIAYSEDIERIIESLTTEEITKDEIVHFL
FGNFCYHIETMNDQHIADRFKGYQDACLNLKVVPKTDLSDLKDHLIQTQNVWESLYGKHL
DKILQRIKKKKSKEREIPDITTAFNQNAVEYEEKYPNCFTNDLSETKTNFSMTWSPSFEK
VELNSNIDYNNAIIKKFRDSFQTTSRITYNSPYSSVHNQTNKARDVTNLVKLCLTELSCD
TTKFNKQELEDEIDINTGSIKVERTKKSQEWCKHGSCLTRNKNEFCMKDTGKENKAVYFK
GLAVMNIGMSSKKRILKKEEIKERISKGLEYDTSVRQTDPNDDYTSVDMASLTHMKKLIR
HDNEESLSWCEKIKDSLFVLHNGDIREEGKIASVYNNYAKNPECLYTQDSVLKTEMETCK
KINKLCNDLAIYHYSEDMMQFAKGLMVADRYMTKESFKILTAANTSMILLAFKGDGMNTG
GSGVPYIALHIVDEDMSEQFNICYTKEIYSYFRSGSNYIYIMRPQRLNQVRLLSLFKSPS
KVPVCFAQFSKKASELEKWLKNKDTEKVNVFSMSVTVKQILINIVFSSVMIGTVTKLSRM
GIFDFMRYAGFLPLSDYSNIKEYIRDKFDPDITNVADIYFVNGIKKLLFRMENLNLSTNA
KPVVVDHENDVIGGITNLNIKCPITGSTLLTLEDLYNNVYLAIYMMPKSLHNHVHNLTSL
LNVPAEWELKFRKELGFTIYEDIYPKKDMFDDKDLFSINGLLNVKALSDYYIENVENVGL
MRSEIENKEDFLSPCYKITTLKSSKKCSQSNIINTDDIIECLQTVKVKDVGNWKGNTLAI
IKGLIRTYNEEKNRLIEFLEDNCVNSLYLLEKLKEIISSGSVTVRKSMTSKFIRNNHPLT
VETYLKTKLYYRNNVTVLKSKKVSEELYDLVKQFHNMMEIDIDSVMNLGKGLEGKKHTFL
QMLEFVISKAKNVTGSVDFLVSVFEKMQRTKTDREIYLMSMKVKMMLYFIEHTFKHIAQS
DPSEAISISGDNKIRALSTLSLDTITSYNDILNKNSRKSRLAFLSADQSKWSASDLTYKY
ILAILLNPVLTTGEASLMVECLLMYVKLKKVCIPTDIFLNLKKSQSTFRQNETAIGLLTK
GLTTNTYPVSMNWLQGNLNYLSSVYHSCAMKAYHKTLECYKGCDFQTRWIVHSDDNATSL
IANGEVDKMLLDFSSSSLPEMLFRSIEAHFKSFCITLNPKKSYASSSEVEFISERIVNGA
IIPLYCRHLANCCTESSHISYFDDLMSLSIHVTMLLRKGCPNEVIPFAYGAVQAQALSIY
SMLPGEVNDSIRIFQKLGVSLMPNEIPTNMGGWLTAPIEPLSILGPSSNDQIIYYNVIRD
FLNKKSLDEVKNSVSTLGYLQMRFKELEEKHKKRTLEIKDKKMIFLINLFEKASVSEDSD
VLTIGMKFQTMLTQIIKLPQFINENALNKMSSYKDFSKLYPNLKKNEDLYKSTKKIKFNE
DSLLEEDELYEKVASSAEMESVHNIMIQNPETILIAPLNDRDFLLSQLFMYTSPSKRNQL
SNQSTEKLALDRVLRSKARTFVDIDSHVKMTYEENMEKKILEMQKFDPGSYCSFKTCINL
VIKDVNFSMLTPILDAAYPCESRKRDNYNFRWFQTEKWIPVVEGSPGLVVMHAIYGSNYI
ENLGLKNIPLTDDSINVLTSTFGTNLLMDDVKSFVSGSSSFETEAFINANNCQRLVKACN
YMITAQNRLLAINTCFSRKSFPFYSKFNLGRGFISNTLALLSTIYSKEESYHFVSTANYK
LDKTIRTVLNAQQDMNLEKILDTAVYISDKLQSLFPTITREDISLILQNICLDSKPIWES
LEEKMRKINNSTGSGFTVSNVILSHNSELNTIQKQVVWLWNMGLCSNRTLDFVIRYIRRS
DVRYVKTEEQDELGNYISGTIYKIGIMTRSCYVQLIASDHDVAVTLRTPFEILNERDYLY
DTYRESIEKLLQKFMFDKINIIKSKQPQIVFLEPGEACLRMTTDNKMIVKVNATPKQIRL
ENVKLVIKIKYENVNSDVWDIIESQKALVLREPEVGECFSDMYKTVDSEAEAIKVIKHGL
MNSLTFIETFGNLSKQIDDIEDETVRETMHDFLMNIKDTCLEGLENCKSIEEYDIFLAEN
GFDDTVELFEDLLKTQDSFENEYSPLFSEIVDRAKQYTRDLEGFKEILLMLKYSLINDAS
GFKSYRATGAHAVELMAKKHIEIGEFNLLGMIQLIKACETCHNNDSILNLASLRNVLSRT
YATLGRRINLNHELDLQNDLMEKSYDFKTLVLPDIKLSDMSREILKDNGFIISGENLKID
KSGEEFEGLANFNMLRLDEEEMYEGLIKEMKIKRKKKGFLFPANTLLLSELIKFLIGGIK
GTSFDIETLLRNSFRPDTYSTDRLGRLSSSVPALKVYATVYMEYKNTSCPLNEIADSLEG
FLKLTKSKAKEQFLDGRVKKALVQLRDEQSKSKKLEVYRNIADFLSRHPLCLSEKTLYGR
YTYHDINDYIMQTREIILSKINELDDYVEMDDDDFLLGYLKGEEDAYDEDEESD
NT seq
8625 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcagaaaataagaaagttaatagaaaacgggaccactctattactatccatt
gaggactgtgtaggttctaaccatggtctagcattagacctgcacaaaaggaatagtgat
gagattcctgaagatgttataataaataacaatgcaaaaaattatgagactatgagagag
cttattgtgaagatttctactgatggggaaggtctgaacacaggaatggcaacagtagat
gttaaaaaacttaatgaactggtgtctctgtttgaacagaaatacctagaaacagaactc
tcaaggcatgatttatttggagaactggtgtctagacatttgaggatcaagccgaagcaa
aggagtgaggtggaaatagagctagcattgagagactatctggaggaactgaacaagaaa
caatgcataaatagtctcagcaatgatgagtttgaaaggatcaacaaagagtatgtggca
actaatgctacacctgacaattatgtcatatataaggaatcgaagaacagcgaactatgt
ttgatgatctatgactggaagatttctgtagatgcaaaaactgaaacaaaaaccatggaa
aaatattacaaaaacatctggaaatcattcaaagacattaaagtcaatggaaaacccttt
ttggaagatcatccagtctttatcacaatagtcattttgaagcctatgggaggaatgcca
ataactgtcaccagcagtagagttttaggaaaatatgaagattcaccctctgcattgcat
ggagagagatcaaagcttgccaaaaatgctaagttactgaacatttatcatgtaggaatg
attgttgggacaacgccaactgtagtcagaaattattatgccaatactcagaaactcaaa
tctgaagtcagagggatattgggtgatgattttggatcaaaagatgtgtttttcagccac
tgggctagcaaatataaagacagaaatcccacagaaattgcatattctgaagatatagaa
aggatcatagaatctttaacaacagaagagataacaaaggatgaaatagttcatttctta
tttgggaacttttgttaccacatagaaaccatgaacgatcagcacattgccgacagattt
aaaggataccaagatgcatgtttaaatctgaaagttgttccgaagactgacttatcagat
ttgaaagatcatttaattcaaactcagaatgtttgggagtctctgtatggtaaacattta
gacaaaatcctacagaggataaagaaaaagaaaagcaaagagagagaaatacctgacatc
acaacagctttcaatcaaaatgctgtagaatatgaagaaaaataccctaattgctttaca
aatgatctgtctgagacaaagacaaatttttctatgacttggtctcctagctttgaaaaa
gttgaattaaattccaacattgattataataacgccatcattaagaaattcagagacagt
ttccaaacaacatctagaatcacttataatagtccatacagctctgttcacaatcagact
aataaagcaagagatgttacaaatttagttaaactttgcttgacagaactaagctgcgat
acaacaaaattcaacaagcaagaactggaagatgaaatagacatcaacactggaagtata
aaagtcgaacgaactaaaaaatctcaagaatggtgcaagcatggttcttgcttaactaga
aacaaaaatgaattctgcatgaaagacacagggaaagaaaataaagctgtttactttaaa
ggcttggcggttatgaacataggaatgagttcgaaaaaaagaatactaaaaaaagaagag
ataaaggaaaggatctctaaaggattagaatacgacacatctgtcaggcagactgatcca
aacgatgattacactagtgtggacatggcttctttaacccacatgaagaaattgatacgg
cacgacaatgaggaaagcttaagctggtgtgagaagatcaaggattcattattcgtgtta
cacaatggtgatataagagaagaaggtaagatagcttccgtttacaacaattatgccaaa
aatccagaatgcttgtatacccaagattctgttctaaagacagaaatggaaacttgtaag
aaaataaataaattgtgtaacgacttggcaatataccattactcagaggacatgatgcag
tttgctaaaggattaatggtagctgataggtatatgaccaaagagagctttaaaatactg
actgctgccaatactagcatgattttgctagcttttaaaggtgatggaatgaacacaggt
ggttcaggagtcccgtatatagcattgcatattgtggatgaagatatgtcagaacagttc
aatatatgctacaccaaagaaatctatagttatttccgtagtggaagcaattatatatat
atcatgaggccacaaagattaaatcaagtgagattgctaagtcttttcaaatctcctagt
aaagttccggtttgttttgctcagttttcaaaaaaagccagtgagctagaaaagtggttg
aagaacaaagacacagaaaaggtgaatgtcttctccatgtctgtgacagtaaagcagata
ttaataaatatagtgttttcatcggtgatgatagggactgtaactaagcttagtcgaatg
ggaattttcgatttcatgagatatgctgggttcttgccactatccgattattctaatata
aaagaatatattagagataagtttgatccagacattacaaatgtagcagacatctatttt
gtgaatggaataaaaaagttgttatttagaatggaaaacctcaatttaagcaccaatgca
aaacctgttgtagtagatcatgaaaatgatgtcattggaggtataactaatttaaacata
aaatgtccaataacaggttccactttgcttacattagaagatttatacaataatgtgtat
ttagcaatttacatgatgccaaaatcattgcataaccatgtacataatctaacaagtttg
cttaatgtaccagcagagtgggaactaaagtttcgaaaagagctagggtttactatctat
gaagacatataccctaaaaaagacatgtttgatgacaaagatttgttttctattaatgga
cttctgaatgtaaaagctttgtccgattactacattgaaaatgtagaaaatgtgggctta
atgagatcagagatcgagaataaagaagatttcttaagtccgtgttataaaataaccact
ttgaagtcttcaaaaaaatgctcacaatcaaatataataaatacagatgatataatagaa
tgtcttcaaacagtaaaagtaaaggacgtcggaaattggaaagggaatacgttggctatt
attaaaggacttataagaacttataatgaagagaaaaaccggctaatagaattccttgaa
gacaattgtgtgaactcattgtaccttctagagaagctgaaagaaattatttccagtggt
tctgttactgtgagaaagtccatgacatctaaatttatccgaaacaaccacccattaact
gtggaaacatatttgaaaactaagctttattacagaaacaatgtgaccgtattaaaatca
aaaaaagtatctgaagaactttatgatttggttaaacaatttcataacatgatggagatt
gacatagattctgtcatgaatcttgggaaagggctagaagggaagaaacatacttttttg
cagatgcttgaatttgtcatttctaaagcaaaaaatgtcacagggtcagtagacttctta
gtatctgtctttgaaaagatgcaaagaacaaaaacagacagagaaatatatctaatgagc
atgaaagtcaagatgatgctttatttcatagaacatacatttaagcatattgctcagagt
gacccatcagaggctatatctatcagtggagacaataaaatcagagcattgtcaacttta
tctctcgatacgataacctcttataatgacattttaaataagaattccaggaagtctaga
ttagcatttctttctgctgatcagtccaagtggtcagcgtctgatctcacttataaatac
attctagccatattgctgaatcctgttttaacaacaggtgaagccagcctgatggtagaa
tgcttgttgatgtatgtgaaattaaagaaagtttgtataccaacagatatttttttgaac
cttaaaaaatcacaaagcactttccgacaaaatgaaactgccataggtcttctaactaaa
ggtttaacgacaaacacatatccagttagtatgaattggctacaaggcaatctgaattac
ttatcttcagtttaccattcctgtgcaatgaaggcctaccataaaactttagaatgctac
aaaggttgtgatttccaaacaagatggattgttcattcagatgataatgcaacatcactg
atagccaatggagaggttgacaaaatgctgctagacttctcaagctcttctttgcctgaa
atgttattccgaagtatagaagctcactttaagagtttctgtataacattaaatcctaaa
aagagttatgcttcctcttctgaagtagaatttatttctgagagaatagtaaatggtgcc
attatacctctttactgcaggcatttggcaaactgttgcacagaatcttcacatattagt
tattttgatgatttaatgtcattgagtatccatgtcaccatgttgttgaggaaaggttgt
cctaatgaagttataccctttgcctatggtgctgttcaagctcaagcactaagcatatat
tctatgcttccaggagaagtaaatgatagcataagaattttccagaagttgggagttagt
ttgatgcccaatgagatacctacaaacatgggagggtggttgactgctccaatagaaccc
ttatcaatactagggccttcttcaaatgatcaaatcatctattacaatgtcataagagac
tttttgaataaaaaaagtttagacgaagtgaagaacagtgtttctacattaggttatctc
caaatgaggttcaaagaattagaggaaaagcacaagaaaagaacattagaaattaaagac
aaaaagatgatctttctaatcaacctgttcgagaaagcatcagtatctgaggactcagat
gtgttgacaataggaatgaaattccaaaccatgctaacacagatcattaagttacctcaa
tttattaacgaaaatgcactcaataaaatgtctagttacaaagacttctcaaagttatat
cctaatcttaagaaaaatgaggatctgtataagagcaccaaaaaaataaaatttaatgaa
gattcgttattagaagaagatgaattatacgagaaggtggcttcaagtgctgaaatggaa
tcggttcacaacattatgatacaaaatcctgaaacaattttaattgctcctttaaatgac
agagactttttgctgagtcaactattcatgtacaccagtccttccaaaaggaaccaacta
tccaatcaatcgacagaaaaattagccttagacagagttttgagatctaaagcaagaaca
tttgtagatattgattctcatgtgaaaatgacctatgaagaaaacatggaaaagaaaatt
ttggaaatgcagaaattcgatccaggctcttattgctctttcaaaacttgcataaacttg
gtgataaaagatgtgaacttcagtatgttgactccgatattagatgcagcatatccctgc
gaatcgaggaaaagagacaattacaatttcagatggttccaaactgaaaaatggataccg
gttgttgaaggatctccaggtttagtggtgatgcatgcaatttatgggtcaaattacatt
gagaatttagggctaaaaaacatccctctgactgatgatagcataaatgttttgacaagc
acttttgggaccaaccttttgatggatgatgtaaaatcttttgtgtctggaagcagcagt
tttgaaacagaagcatttataaatgccaacaattgtcaaaggcttgtaaaagcatgcaat
tacatgataacagcacagaacagattgctagcaataaacacctgcttctccaggaaaagt
ttccctttttattctaaattcaatttaggtagagggttcatctcaaacactttagcgttg
ctttcaacgatttatagtaaagaagaatcttaccactttgtttccacagctaattacaaa
ttggacaaaactattagaacagttttgaatgcacagcaggacatgaacctagagaaaata
cttgacacagcggtatatatttcagacaagttgcaatctcttttccccactataaccaga
gaagacatctctttaatacttcaaaatatctgtttggacagcaaacctatatgggaaagc
ttagaagaaaaaatgaggaaaataaacaactctactggaagtggatttactgtgtccaat
gtaatattgtctcataatagtgagttaaatactatacagaagcaagttgtctggctgtgg
aacatgggtctgtgttctaatagaaccttggattttgttataagatatataaggagaagt
gatgtcagatatgtaaaaacagaagaacaagacgaattaggcaattatatctctgggaca
atatacaaaataggtataatgaccagaagctgctatgtgcaactaattgcatctgatcat
gatgtagccgttacgttgagaacaccctttgagattctcaacgaaagggattatctttat
gatacatacagagagagcatagaaaagcttttgcaaaaattcatgtttgataaaataaat
ataatcaagtctaagcagcctcaaatagttttcttagagcctggagaagcatgtttaaga
atgaccacagacaacaaaatgatagttaaagtgaatgctacaccgaaacaaatcaggtta
gagaatgttaaattggtaataaagataaaatatgaaaatgtcaattcagatgtatgggac
ataatagaaagtcagaaagctttagttttgagagaacctgaagtgggtgaatgcttttca
gacatgtataaaactgttgattcagaagcagaagcaatcaaagtgatcaaacacgggttg
atgaattcgctaactttcattgagacttttggaaacttgtcaaaacaaattgatgacata
gaagatgaaactgtaagagagactatgcatgattttttaatgaacatcaaagacacctgc
ctggaaggattggagaactgtaaaagcattgaggaatatgatatttttttagccgaaaac
ggtttcgatgatacagttgagttatttgaagaccttttaaagacacaagacagttttgaa
aatgaatatagcccattgttttccgaaattgtagacagagctaagcagtacacgagagat
ttagaaggatttaaagaaatactacttatgcttaaatattctctgatcaatgatgcatct
ggatttaagagttacagagctactggtgcacatgcagtagaattgatggcaaaaaaacac
atagaaattggtgagtttaaccttttagggatgatacagctgataaaagcctgtgagaca
tgccacaacaatgactctatattgaatcttgccagcttgagaaatgtgttgagcagaaca
tatgccacactaggaagacgcataaacttgaatcatgaattagatttacagaacgatcta
atggagaaaagctatgattttaagacattggtgttacctgacatcaaactgtcagacatg
tctagagaaatactaaaggacaatggatttatcatttcaggcgaaaatttgaaaatagat
aaatcgggggaagagttcgaaggtcttgccaatttcaatatgttgagattggatgaagaa
gagatgtatgagggtttgataaaagaaatgaaaattaaaaggaaaaagaaaggcttctta
tttcctgcgaacactttacttcttagtgaattaataaagtttctgattggagggattaaa
ggaacaagctttgacattgaaacattattgaggaacagtttcagacctgacacttattcc
actgataggctaggaagattaagttccagtgttccggcactaaaggtgtatgcaactgtt
tacatggaatacaaaaatacatcctgccctctgaacgaaattgcagatagtttagaggga
tttctgaaattgactaaaagcaaggcaaaggaacaatttctggatggacgagtcaaaaaa
gctctagttcaactaagggatgaacagtccaagtcaaagaaacttgaagtgtacagaaat
atagctgattttttatcaagacatcctttgtgtctatcagagaaaacactgtatggtaga
tatacatatcatgacattaacgattacattatgcagacacgagaaatcatactgagcaag
atcaatgaattggatgactatgttgagatggatgacgatgattttctactcggctatctg
aaaggagaagaagatgcttatgatgaagatgaagaaagtgattaa
DBGET
integrated database retrieval system
