Viruses: 10618672
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Entry
10618672 CDS
T40000
Symbol
SCRM01_005
Name
(RefSeq) Synechococcus phage S-CRM01; virion structural protein
Virus
1026955
Synechococcus phage S-CRM01
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Baseplate_wedge
Motif
Other DBs
NCBI-GeneID:
10618672
NCBI-ProteinID:
YP_004508438
RS:
NC_015569
LinkDB
All DBs
Position
NC_015569:2701..7065
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AA seq
1454 aa
AA seq
DB search
MNNKTLYPSTQIDTILPQYIIEQYRNFVNFMTSASESQERMGFGQDILQNLQTYRDFDTY
QKGIIKFGVLSQTIEKDSNELILENGFGFPEENGVLYIDNEIILYRTKEGNTFYDLKRGS
AGTTILPTFTTSGEYLETCPEKHVAGARVVNLSVLFLASMLETIYSSFAPDIDSSKIFSE
VNQSSLLSNIRDFFQSKGTKLGIQTLFKMMFGDTGTDVSYPGDQIIVPSVSTYAEDLICR
VVPLPRVFYAPRELPTDPGILIGSIIQCKSYNDDIVYGEAMVEYTKSYPFGQSIQYDLLL
NNESLTGRIIPNPFTNLTQALTVNTTTILVDSTEGFPERGVLFINNEGILYEDKTNTSFI
NCSRGYLGQETNHELDSKVRGPFYIQGNYFLQGESVEDKCNPDSSTIVTSRSWPAGLVSE
TNILDAGLLHSESDTFIIKEPITNTNRTDIEIVVSDVSAGGISDVHIQDPGSNRTAVGDL
LYFDNTDTFGAGAAATVSWIRGECIEDSTGCEIVTRLVSHRQSFNFSSYADSSKYIFVPG
QFIETSDNPTNPSATAIVSSWNTVTKILTVQTISSNLILAGDIIKDARGFRIPIAPDYLG
VIPVTNSIAQIGQDYEFSNLTILDYVAPTTRLNGSPLVNGDLWWSVQNGRLYIFYDNYWV
VTQPYASRSFGISSLNEPIGVTGADFIATGFTPTKSQIIISDTYPTSNPNGSALRIGDLW
WSPVTGLLYVWNSDLAVGGGCITGCGGETSQQSAEWVCTDPTGLLSWGPQGSQDQGPGTP
VAPVSASSFDLTVVVAETAPLGKPDGTLWWSSRVGRLFVRYQNTWVITNPFGNASGSESY
FPDGTLDNSGSSFFESGPIVSLPESATQTELFFTDSCHFFPGDNVVFSNGERSTVLKKNV
SSFVLQRDGSSVELLDGTVMKNKSRAKITIQTEEVHNLKVGDVVRFYSPIESLNESVFDV
IDVGDIVPAQATVQLTGNSVSDITIIDAGENYDRDFYVKFVGGGGSGAVAIARVTDGSVD
TVDIISGGVNYTSVPAVEFLFERSKYFFTVYSDVWYANPNITHYETSSLSAENYAAEIKL
ISGGDGYISLPTIPGIYKREIDRASFKFELSGTSIDSITVLNGGARYVNPKAIIIDPNGK
GNGAVVNLIANNGVIVFAQVIVSGIDYENPFMIVIEEGQYLPMTTDIGKILAFKVINEGR
EVNPNPLRTPLVYVETKLLLKYPTPNSCIGIGSNSTPTWTVGNTVSIGSTSGIITSWDPD
NQILSVNNVLGSIQNGDTVSDLSGNSATILINGQSRQNLVVSGTSILNGKFITDKSIVSS
NFSNLQDGKYYQSFSYVIESSRQRRQYETLVDSIIHPAGFVYFSKTKLENNTITNNTVDT
PIIGPPRVLGNQGGQGGQGGQGGQGGQGGQGGQGGQGGQGGQGGQGGQGPQGVLGPITVG
RVIYRIFNANPQGE
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataaaaccttgtatccttcaactcaaatagacaccatattgcctcaatatatc
attgagcaatacagaaattttgtaaatttcatgacctctgcgtcagagagtcaagaacga
atgggctttggccaagatattcttcaaaatttacagacatatagggactttgacacatac
caaaagggaatcattaagttcggagtcctgtcacaaacgattgaaaaggatagtaatgaa
cttatacttgagaatgggtttggatttccagaagaaaatggtgtcctatacattgacaat
gaaattattctttacagaacaaaagaaggaaatacattttatgatctaaagagaggatct
gcaggaactactatccttccaacattcacaacttccggtgaatatctagaaacatgccca
gaaaaacatgttgctggtgcaagagtagtcaatctatctgtactgtttttggcttcaatg
ctggaaacaatctatagttcttttgctccagatatagattcatcaaagattttctctgag
gtgaatcagtcttcattgttatcaaatattcgtgacttcttccaatctaagggaactaaa
ttaggaattcaaacattatttaaaatgatgtttggagatacaggtaccgatgtatcgtat
cctggtgatcaaataatcgttccttctgtgtcaacttatgcagaagatttgatctgtaga
gttgtccctttgccgcgggtattctatgcaccgagagaattgcctacagatcctggtatc
ctgataggttcaattattcaatgtaagtcctacaatgatgacatcgtatatggggaagcg
atggtcgaatataccaaatcttatccttttggtcagagtatccaatacgatttactactc
aacaacgaaagtctaactggaagaataattccaaacccttttactaatttaactcaagca
ttaacagtcaatacaaccacaattcttgtagattctacagaaggatttcctgagcgtgga
gttttgtttattaacaatgaaggtatcctttatgaagataaaacaaatacttcttttatc
aattgttctagaggatatttgggacaggaaacaaatcatgaattggattcaaaagtaaga
ggtcctttttatattcaaggaaattactttttgcaaggagaaagtgtagaagataagtgc
aatcccgattcttcaactatagtcacaagtcgttcttggccagctggtttagtttctgaa
actaatatattagatgccggccttctacacagtgagtcagatacttttattattaaagaa
ccgattacaaatacaaatagaacagatatagaaattgtagtttctgatgtttccgccggt
ggaatatctgatgtacatattcaagatcctggatctaaccgaacagctgttggtgattta
ctgtactttgacaataccgatacctttggtgctggtgctgccgctacggtatcttggatt
cggggtgaatgtatagaagattccacaggatgtgaaatcgtaacaagattagttagtcat
agacaatcatttaacttttcatcatatgctgactcttcaaagtatatttttgttcctggt
caattcatagaaacatccgataatccaacaaacccttcagcaacagcaatagtttcctct
tggaatactgtaacaaagatcctaacagttcaaactatttcttccaacctaattcttgct
ggtgatatcattaaagatgctagaggattcagaatacctattgctccagactacttggga
gttatacccgtcacaaacagcattgcccaaattggacaagattacgaattttctaatcta
acaattttagactatgttgcaccaacaactagattgaatggttcgcctctagtcaatggt
gatctttggtggtctgttcagaatggtagattgtatattttctatgacaactattgggtc
gtaactcaaccatatgcatctcgtagttttgggattagttcattaaatgagccaattggt
gtcactggtgcagactttattgcaacaggattcacacctacaaaaagtcagattataatt
tctgacacatatccaacatcaaatccaaacggaagtgcacttagaattggtgatctttgg
tggtctcctgtcactggtcttctttatgtttggaatagtgatttggccgtagggggtgga
tgcatcaccggatgtggtggggagacctcacagcagtctgcggagtgggtgtgtacagat
ccaaccggattgttgtcctggggtcctcagggttcacaggatcaaggtccagggactcct
gtagctccagtaagtgcatcatcttttgatctaactgttgttgttgcagaaacagcaccc
ctagggaaaccagacggaactctgtggtggagcagtagggtaggtagactctttgttcgt
tatcaaaatacttgggtcattacaaatccttttggaaatgcatcgggatctgaatcctat
tttccagacggaactctagacaatagtggatctagtttctttgagagtgggcccattgtt
tctcttccagagtctgccactcaaactgaactatttttcacagattcctgtcattttttc
cctggagataatgttgtattttcaaacggtgaaagatctactgttcttaaaaagaatgta
agttcttttgtattgcaaagagatggatcatcagtggaacttctagatggtaccgtgatg
aaaaataaatccagggccaaaattactattcaaacagaagaagtacataatctaaaagta
ggtgacgtggttagattttatagtcctatcgagtctttaaatgaaagtgtattcgatgtc
atcgatgtaggtgatattgtacccgcacaggccacagtacaactcacaggaaattctgta
tctgatatcactatcatcgatgctggagaaaattatgatagagatttctatgtaaaattt
gttggtggcggtggatctggggctgttgcgattgcaagagttaccgatgggagtgtagat
actgttgatattatttctgggggtgttaattacacttcagtacctgcggtagaattttta
tttgaaaggtctaagtatttctttactgtatactctgatgtttggtatgccaatccaaac
atcacacactacgaaacttcttccctttctgcagaaaactatgctgcagaaattaaactt
atttctggtggtgatggttatatttctttaccaacaattcctgggatctataaaagagaa
attgacagggcatcatttaaatttgaactcagtggtacttctatagattcaattacagta
ttgaatggtggcgcaagatatgttaatcctaaagcaatcatcatagatccaaacggaaag
ggaaatggagcagtagttaacctgattgcaaacaatggggttatcgtatttgcccaagtt
atagtgtctggtattgattatgaaaacccattcatgattgttatagaagaaggacaatat
ctaccaatgacaacagacattggtaaaatattagcatttaaagttatcaatgaaggaaga
gaagtaaatccaaatccattaagaactcctctcgtttatgttgaaactaaactcctactc
aaatatccaacaccaaattcatgtataggtattggctcaaattccaccccaacatggact
gttggtaatacagttagtataggaagtacatctggaattattacatcttgggatcctgat
aatcaaattctatctgttaataatgttctgggttcaattcaaaatggagatactgtttct
gatcttagtgggaactcagctaccattttgattaatggtcagtctagacagaatttagtt
gtaagtggtacctctatactaaatggaaaatttattactgataaatctatcgttagttca
aatttctctaatctccaagatggaaaatattatcaatctttctcatatgtcatcgagtca
tctagacaaagaagacaatatgagactctagttgatagtattattcacccagctggattt
gtatacttctctaaaactaaattagaaaacaatacaataactaacaatacagttgatact
cctatcatcggtcctccgcgtgtcttaggcaatcaaggtggccaaggtggtcaaggaggt
caaggaggccaaggtggtcaaggtggtcaaggaggccaaggtggtcaaggaggccaaggt
ggtcaaggtggtcaaggtggtcaaggtccacaaggtgtactgggtcctattacagtaggc
cgcgtaatttatagaatatttaatgcaaatcctcaaggggaataa
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