Viruses: 11130825
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Entry
11130825 CDS
T40000
Symbol
TRMV_gp1
Name
(RefSeq) Tamus red mosaic virus; replicase
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
1081702
Tamus red mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
nSTAND_NTPase5
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
11130825
NCBI-ProteinID:
YP_004849314
RS:
NC_016003
UniProt:
G3LHV4
LinkDB
All DBs
Position
NC_016003:82..4587
Genome browser
AA seq
1501 aa
AA seq
DB search
MSRLRGALEQFTDPAQKIVIQNEQYQHLRKTLSHTATTNPYAIAESAANVLEDLGINSNP
FATTAHTHSAAKAIENDLYFSASSLLPKENPVSFLFMKPAKLRFFHRGPQHNDHFINKVV
EPKDVARYDPDTLVSSLPTLSTSHAFMGDSLHFLPFSFLVRLFSDNVQLKTLVATMVLPA
EAKFNLASIYPNIYTLQYHRCKKGKVTHFSYAPGGHKGAEYVHELKQLDWLSVGRLTDGV
TTITAQKIETKAANHLFIFQRGSLMTPCLRNFSTETKFVTLPLIFLPEKFNARQPIRKTL
VMQMFLYVKGVKQVSERDIWAKWRQLIKTEDLQDFSAIELLHLTNYFVFVGKQSSINCFD
DVLKGGFLTRWFKPIKNWFEMVRQKIFGEAEFVRLVRALEWTEVDLKLDTKNYDFKRREG
NGFLSLSKVAAGPDDSEDVFHLPQEESLFSQMEWLGEFWNFIKGENGKKVAEPCPNEPVC
ETNVDEDQSAHEWLLKLEQTRVVEETPLEQPTEVSTTLDATLTMLPDNSQMSEDEKVVAE
GAITESEQAPEEKAEELEQVDSSPLQAEVAQIRFGTAPTKAEVAALIRTAMKQKQISLEP
LEATAGCEQEMMEGSSSAAVLEDPPATTSDDTAEDDSGLTSDEREMKKFADEATQQVIDM
SKGEFEKKPWAKWMSILENAGFKGTTCLLDANNYLIQPILGVSKLTARAWPRELTPEVDL
FDRLKAIHRHPCAYTISNLRARAYASDVKNDRTGSFTRSQDLAWKEAFTMICESPRQREV
ALTVIHGAGGSGKSFALQKYLEDCPDAEVKIVLPTNGLRMDWLAKLPKFPLTSVQTFEKA
LXSQTAKVVIFDDYTKLPNGYIDAYLSLRTTVVWAILTGDSRQSSFHEMNEQALINGLTP
AADHFSDYARYYLNATHRNKQDLARMLGVYSERTGLTTVSMSSRPLKEVHMLVPSLIQKK
TYTELGYKTSTYAGCQGITAPKVQVLLNSDTTLCTDKVLYTALSRAVHSIHFINTSASSA
AFWDKLNATPYLKTFLSTVREQSLASAKPREEGPTPVAAPKTHVPVENSNLCLEGAVEKL
LEKHDREIFRADHGHSNCVQTDNPTIQLSSHQQAKDQTLLWATIEARLKISTPERNLAEY
LMKREVGDVLWLHYKNAMNLPEEPIPFEQTLWDTCAEEVQKTYLSKPMHMLKNGELRQSP
DFHKNTIALFLKSQWVKKMEKLGADKIKPGQTIASFQQAAVMLYGTMARYMRRMREVFQP
THVFINCEQSPEGMSDWIKNEWNFKGNAYANDFTQFDQSQDGAMLQFEILKAKHHSIPEW
VLEGYLDIKTNAHVFTGTLGIMRLTGEGPTFDANTECNIAYTHLRFNVPKGTAQAYAGDD
SVLACIPEERESFKMWKNKLELTAKPEYFPQMQGEWAQFCGFLFTPLGALKEPLKMLAVV
ELAKQRGELKKNMRSYALDVLLNYQHGDALQHVFSEKQLEAHQITVRNLIKFGGSSILEN
C
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtttgagaggggccctagaacaattcactgatccagctcagaaaattgtcatc
cagaacgaacagtaccaacatctacgcaagacgctatcacacactgccactacaaatcct
tatgctatagccgaatctgccgccaatgtgttggaggatttgggtatcaactcaaatcct
tttgcaacaactgcccacacacactctgcagcaaaagctatagaaaatgatttgtatttc
tctgccagctctttacttccaaaggagaatcctgtctccttcctgttcatgaaacctgcc
aagctcagattctttcacaggggtccgcaacacaatgaccactttatcaacaaagttgtg
gaaccaaaagatgtggccaggtacgatcccgacacacttgtgtcttcactgcccaccctt
agcacctctcatgctttcatgggagattcattgcatttccttcccttttcttttttagtt
agacttttctcagataatgtacagcttaaaactttagtagccaccatggtcttgcctgct
gaggcaaaatttaatttagcttccatataccctaacatatatactcttcaataccataga
tgtaagaaaggtaaggtcactcatttctcttacgcgccaggaggtcacaagggcgccgaa
tatgtgcacgaattgaaacaattggattggctttcagtaggacgtctcactgacggcgtc
acgacaatcacagcgcagaagattgaaactaaagcggccaatcatttgttcatcttccag
agaggatcactaatgacaccctgcctccgaaatttctccacagaaacgaagtttgttact
ctcccactcatcttccttcctgaaaaattcaacgctagacagccaatcaggaaaacccta
gtgatgcagatgttcctatatgtgaagggcgtcaagcaggtgtctgagagagacatctgg
gctaaatggcggcaactgattaaaaccgaggatcttcaagatttctccgccattgaactt
ctacacttaacaaattactttgtgtttgttgggaaacagagttcaatcaattgctttgac
gacgtgctaaaaggtggctttctgactaggtggtttaagccaataaagaattggtttgag
atggtgagacagaaaatctttggagaagctgagttcgtgcgactggtacgagctttggaa
tggactgaagtcgacttgaaacttgatacaaagaattacgacttcaagagaagagaagga
aatggattcctgtccttatctaaggtagctgcgggccctgacgactctgaagacgtcttc
cacctccctcaagaggagtctctcttctcccaaatggagtggctcggtgaattctggaat
ttcataaaaggggagaatggcaagaaggttgcggagccttgcccgaacgaacccgtctgt
gagactaacgtggatgaagaccaaagtgcacacgagtggttgctgaaactcgaacaaact
cgagtggtggaggagacacctctcgagcaaccaacggaagtctccaccacgctggacgcg
accctgacaatgctacccgacaattcccagatgagcgaggacgagaaggtagttgctgag
ggtgcgatcacagagagcgagcaagcacctgaagagaaggcggaggaacttgaacaagtg
gattcttccccactccaagcagaggtcgctcaaattcgtttcggcacggcacccactaaa
gctgaagttgctgcactcataagaaccgcgatgaaacagaaacaaatttcgctggaacct
cttgaagccaccgcggggtgcgagcaagaaatgatggagggatcgtcatctgctgccgtt
ctggaagacccacctgcgaccacttcagatgacacagctgaagacgactcgggcttgacc
agcgatgagagggagatgaagaagttcgccgacgaggccactcagcaggtcattgacatg
agcaagggagaatttgagaagaaaccctgggctaaatggatgagcattttggagaacgct
gggttcaaagggactacttgtttgctcgacgcgaataattacctgatccagccaattctc
ggagtctcaaagttgacagctcgcgcctggccgagagagctcactccagaagttgatctg
tttgaccgtctgaaggcaattcaccgtcatccttgcgcttacacgatatcaaacctccgc
gcgagagcatatgcatcagacgtgaagaacgacaggactgggtcattcaccagatcacaa
gacctcgcgtggaaggaagccttcacgatgatttgcgagtcaccgaggcaacgagaagtg
gccctcaccgtcattcacggagcggggggttcagggaaaagcttcgcgttgcagaaatac
ttggaagattgcccggacgctgaggtcaagatagtgctgcccacgaatggattgagaatg
gactggctggcaaaattgccaaaatttccactgacgagcgtccaaacatttgagaaagcg
ctgntctcccaaactgccaaggtggttattttcgatgattacacaaagctaccaaatggg
tacattgacgcttacctttcattgagaaccacagtggtttgggcaattctgactggagat
tcgagacagtcatccttccacgagatgaatgagcaagccttaattaacggtttgacccca
gctgctgaccacttcagcgactatgccagatactatctcaacgccacgcaccgaaacaaa
caggatctggcaaggatgctgggcgtctactccgaaagaacgggcctcacaactgtttcc
atgagctcacgcccgctgaaggaagttcatatgctggtaccctcattaattcagaagaag
acctacactgaactagggtacaaaacgtccacatacgccggctgtcaaggaattactgcc
ccgaaggtgcaagtcctgctcaattcggacaccaccctgtgcactgataaggtcctctac
acggcgttatcacgagcagtgcattccatccacttcattaatacctctgcatcatccgcc
gctttctgggacaagttgaacgccacaccgtatctcaaaactttcctgagcacggtacgg
gaacaaagtttggcgtcagcaaaaccaagagaggaagggcccactccagtcgcggctccg
aagactcacgttcccgtggagaattcaaacctttgccttgaaggtgctgtagagaagttg
ctggaaaagcatgacagggagatattcagagcggatcatggccactcgaattgcgtgcaa
actgataaccccacaatccagctgtccagtcaccaacaggccaaggatcaaactctgttg
tgggcaacaattgaagctcggctcaaaatatcaactcccgagcgaaatttagccgagtac
ctgatgaagcgcgaagttggtgacgtgctctggctccattataagaacgcaatgaatttg
ccggaggagcccatcccatttgagcagacgctctgggacacttgtgctgaggaggtgcaa
aagacttatctctctaagccgatgcacatgctgaagaatggagaactgaggcagtcccct
gactttcacaagaacaccatcgcgcttttcctgaagtcacaatgggtgaagaaaatggag
aaattgggggcggacaagataaaaccgggacaaacaattgcctccttccagcaagcagcc
gtcatgctttacggcactatggcccgatacatgcgaaggatgagggaagtcttccagccc
acacatgtcttcatcaattgcgaacaatcccccgagggcatgtccgactggatcaagaac
gagtggaacttcaaaggaaatgcatacgccaacgatttcactcagtttgaccagtcccaa
gacggcgccatgcttcaattcgagatcctaaaggccaagcaccattccatccctgagtgg
gttcttgagggttacttggacatcaaaacgaacgcgcacgtgtttacgggcactttgggc
ataatgaggctcacaggagaggggccgactttcgacgcgaacaccgagtgcaacattgct
tacactcacctgcggttcaatgtgccaaaagggacagctcaggcgtatgcgggtgatgat
tctgtgttagcttgtattccggaagaaagagagtctttcaagatgtggaagaacaagctt
gaactaacagcaaaacccgagtactttcctcagatgcaaggggagtgggcccaattctgt
ggtttcctgttcacacctcttggggccttgaaagaaccgctgaagatgctcgcggtcgtg
gaactcgctaaacagaggggtgagttaaagaagaacatgaggagctacgcccttgacgtg
ctgctgaattatcaacacggggatgctcttcaacatgttttctcagagaaacaactagaa
gcccaccaaatcacggttagaaatttgattaagtttggtggttcttctattcttgaaaac
tgttag
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integrated database retrieval system
