Viruses: 11272605
Help
Entry
11272605 CDS
T40000
Symbol
L, PoYDV_gp7
Name
(RefSeq) Potato yellow dwarf virus; RNA-dependent RNA polymerase
KO
K26704
Rhabdoviridae RNA-directed RNA polymerase
Virus
195060
Potato yellow dwarf virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Mononeg_RNA_pol
Mononeg_mRNAcap
Motif
Other DBs
NCBI-GeneID:
11272605
NCBI-ProteinID:
YP_004927971
RS:
NC_016136
UniProt:
D5L205
LinkDB
All DBs
Position
NC_016136:6962..12757
Genome browser
AA seq
1931 aa
AA seq
DB search
MMMMMCGEVVSPRICMKGVIIICNQLSKPVDDYRKNFIFKNEEAKIRSVVGDMGALLDNI
TCISFWWKLATLNTRLNENYIMSDLTVHGLLAVNTGMIGDLVRSEMRVVYQGDVFPDVNM
SRYVSSRIQHVTILYPNLIWVTRLMCFVLLMKNNLKTIRAKGTSIFPNLEHFSLVGENAV
VQVEPSFLLTFNTDLLHINVGGRRFWCPMQYFINASDKIQERHNVLLYVSLCNPLIPRLS
PSVDMVIRVIEIFDRLLARLGNEGYSDVSVFEALIVGIIIDRDDPDLILLPGEFTRSIIN
DTSEMGRAYVEEMREYLLNLSVDQLADLHGLYRIWGHPVIDIDGGLEKMKNISLKEKYTD
EALGRTVGQKFKEIFFQNYRAKHGFYPPHRLPGDPDSANDDEDDEIPPATYLTTCLATGK
PFSTSNVGYKLEDWDTVILKKAFEIPYSWNIVHTIKDKALSPNRVELCNNLVSRGHVFNQ
NMRRVILKTISTPMKPMRDFLKSVAAFGLALVFLLIGLYPKERELKVLPRFFSLMTHELR
LYFTATEQLLNDKILKYFPEITMSLNLLEMQKKMGKMSGMQKTQSVSVTYVVNMDFVKWN
QQMRKNICTYVFRPLGELFGLPLLFERTHYLLEKCVIYLSSGERELIPDSEKGVKVDNKY
VWENDGSGKEGLRQKGWTIMTDCDIKLVADRLGMNSSLVGGGDNQVLTITLTTEDVGEDG
NVSIEGKQKIKERMRVFMEELQKHFDKRGLPLKTSETWTSTSLFMYNKHMYHNGRPLRTV
LKQISRCFPFSNSSIMSSSLMCNSLSTTLKSAMQKEHFLVGILTMKAMWGMYISNLAVNM
NPLFYSTRGCLLSGKYTITRNRVDEQSNVTERNLEMLWAKIMYLPSVMGGPGVANCFNLT
QRGFPDAVTEGFLFLQRLHAEMHMINPKMGAAVGELLGMSFKKEPNFEKLVEDPASLSHD
APSHSTSVLRERARSAVMEMAPGVNREFVDLMKVADKNKELEFYKSLCSGEEIDPKVLHE
IAKSSMYGVTNSLLSRVDKTRTIKRMNETVSVVSDIAAAEEKYIGYLLVRDNKPHDLKLT
GCTRVLADVARQMSYGKRILGTTVPHPAEYLAVFPASHPECMTGFISMRVQPSTKDERMT
STGPCKPYYGSYTKERFRATEIASAYGDEDVLKRATNIQKLIGWRYSAESMFGELITAVF
RAVTNIDPTHLRVREEVIRGSYDHRRNTDSNTHGGIPNFLNTISTYLSICTSTWTEHSRS
GRNEYIHFQACIITCILKMMPMLTSNHQFPRIQEFHAHETCGTCITEIENIDPIRTAPKR
PVSFPTLVGNTLVYMDAEDVRIDYHKKVLIEETNTIAPLLMSSEMLDGEINLLEDCVSTM
LILESYGIKHHTAKSYMILARERIDLGLCLTRFREKSVSLRVLLPFLTTVIPGSLNVLCD
TPAGYIEKFNTLGWTTEGKIEGSTSSFRIDFWDRDIPVSYLSTINSTLGGIPMQVAMHIV
GRFPRVLSCLDCLDILRKMIHQTAQFSVNITLCAIHNNMMKRLPITNVHPDNVLKGRPVS
DEPDLYGLTPGTTEIQQVLPSDESDMVELPRPTRLQEVGELLHNNLWSNLIQNFITSVWI
DRIIIDNTLEALEMLMGALKIREGFQKDIYILVDELSQEETGVIYEKFRSSRLRGCRVVI
IYDTADIPSGDMLLISQSESWKQDETGGKEVYVIYGGSQLNRMEDDMKRRIEEVYHDNSL
IQTSFLSVVHLGAYPRHTVNLSALAAVMNQGEVFESDRYGGRSGRSLFTTLSGTRGLVSR
YRFRTRYEMINLFQRGLEKIEKIDTFQKGRVKTPKIQMELMLLYVSAVAHCPDDQSEFVK
RIKRMRLDSIRGTIKPALRRAALESLASRFYLGMRDYLSKIEHIQFHIDDLSQGINFKTQ
RRVGVNLIGSM
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgtgtggggaggtagtcagtccgaggatatgcatgaagggggtgatt
atcatctgcaatcagctctcaaaacccgtagatgattaccggaaaaactttatttttaag
aatgaggaagctaagattagatcagttgttggggacatgggggcactccttgataatatt
acatgtataagtttctggtggaaattggcaactctcaacactcgtctgaatgaaaattac
attatgtctgatctgactgtccatggcctcctcgctgtgaataccgggatgataggggat
ttagttcggtctgagatgagggtggtttatcaaggagatgtctttccagatgtaaatatg
tcaaggtacgtctcctccaggatacagcatgtgactatactttatccgaatctaatatgg
gtgaccagactgatgtgctttgtattattgatgaagaataacttgaagacaataagagcg
aaaggtacttccatcttccccaacctagaacatttcagcttagtaggggaaaacgctgtc
gtgcaggttgagcctagcttcttactaacattcaatacagatttgttacacataaatgta
ggggggaggaggttctggtgtccaatgcagtatttcattaatgcttctgataagatccag
gagaggcataatgtgcttctgtatgtctcactctgtaatcctcttatacctcgattatcc
ccttctgtcgatatggtaatcagagtcatcgaaatatttgacaggctactagctcggttg
ggaaacgaaggatattctgatgtatctgtatttgaggcacttattgtcgggataatcatt
gacagagatgatcctgatttaatcttattgccgggggaattcaccagaagtatcatcaat
gacacctcagaaatgggcagggcatatgtcgaggagatgcgtgaatatctccttaatcta
tcggtagatcagcttgcggatttgcatggtttgtacaggatatggggccaccctgtgata
gatattgatggagggctggagaagatgaagaacatttcacttaaagagaaatacacagat
gaagccttgggtagaacagttgggcagaagtttaaagaaatctttttccaaaattaccgt
gcgaaacatgggttttatcctccccatagattaccaggagatcctgatagtgccaacgac
gatgaagatgatgagataccccctgcaacatacttgacaacatgccttgctacagggaaa
ccattctcaacctccaatgtaggttacaagttagaggattgggatactgtcatactgaag
aaagcatttgaaattccttactcttggaatattgtgcacacaatcaaggataaggcgctc
tctcctaaccgggtggaactctgcaacaatctagtatcgaggggtcacgtgttcaaccaa
aatatgagaagggtgattcttaagacaatctcaacccccatgaagcccatgagggatttc
ttgaagtcagtggcagcttttggcctggcattggtgtttctcctgatagggttgtatccg
aaagagcgtgaattgaaggtgctacctagattcttctctttgatgactcatgaacttagg
ttgtactttactgccactgaacagttgctgaatgataagatcctcaagtatttcccagaa
attaccatgtctctcaatctgctagagatgcaaaagaagatgggcaagatgtcaggcatg
caaaagacacaatcagtctcagtcacatatgtcgtcaatatggattttgtcaaatggaac
caacagatgaggaagaatatatgtacttatgtctttaggccattaggtgagctatttggg
ctgcctctcctctttgagaggactcattatctacttgagaagtgtgttatatatttgtct
tctggagaaagagagttaattcctgactcagagaaaggggtgaaggtagacaacaaatat
gtatgggagaatgatggttcaggcaaggaaggtctacggcaaaagggatggacaatcatg
acagattgtgacatcaaactggtggcggacagattaggaatgaactcatctctggtgggg
ggaggggacaatcaggtgttaacaataacactgacgaccgaggatgtaggggaagacggg
aatgtcagtatagagggtaagcagaagatcaaagaaaggatgcgggtattcatggaggag
ttgcagaaacatttcgataagaggggtcttcccctgaagaccagtgagacatggactagc
acatccttgtttatgtataacaagcacatgtaccacaacggcaggcctttgagaactgtt
ctcaagcagattagcagatgttttcctttctccaattcatcgatcatgtcctcttcactc
atgtgtaacagcctaagcaccacattgaaatccgcaatgcagaaagagcatttccttgtg
ggaatcttaacgatgaaagccatgtggggaatgtatatttcgaacctagcggtcaacatg
aaccctctgttttatagcactaggggatgtctgttatccggaaaatataccatcacaaga
aatcgagtagatgaacagagtaatgttacagaaaggaatttggagatgctgtgggctaag
attatgtatctaccctccgttatggggggacccggggtagccaattgcttcaacctcaca
cagagagggtttccggatgcagtgactgaggggttcttattcttacagcggttacatgcg
gaaatgcacatgatcaacccgaagatgggggcagcagttggggaactcttggggatgtct
ttcaagaaggagcccaatttcgaaaagcttgtagaagatcctgcatctctatctcacgat
gcaccctcacacagcacctctgtactgagggagagagccaggtccgccgttatggagatg
gcaccaggagtcaacagagagtttgttgatttaatgaaagtggctgataagaataaggaa
cttgagttctacaagagcttgtgctcaggggaagaaattgacccaaaggtcctgcatgaa
atagcaaagtcttctatgtatggagtgactaacagcttattatctcgtgttgataaaaca
agaacaataaagcgtatgaatgagactgtgagtgtagtttctgacattgctgctgcagag
gagaagtatatcggatatcttctagtcagagataacaagccccatgatctcaagttgaca
ggttgtactagagtccttgcagatgttgcaaggcagatgtcatacgggaagagaatacta
ggtacaactgtacctcatcctgcagaatacctggcagttttccctgctagtcatcctgaa
tgtatgacaggtttcatctcgatgagagtccaaccatccacaaaagatgaacgaatgaca
tctacaggcccctgtaagccatactatggatcttatacaaaggaaagattcagggcaacc
gagattgcatccgcatatggtgatgaagatgtgctaaagagggctaccaatatacagaag
ctaattgggtggcgatattctgctgagtcgatgtttggtgaattgattactgctgtgttc
cgagctgttaccaacattgaccccacacacctgagggtgagggaagaggtgataagaggt
agctatgatcaccgcagaaacacagacagcaacacacacgggggcattccgaacttcctg
aacaccatcagtacatatctaagcatatgtacatccacttggacagaacactccagatca
ggaaggaatgagtatattcatttccaggcttgcattatcacatgcatcctcaagatgatg
cccatgttgacatcaaaccaccagttcccaaggatacaagagttccatgcccatgaaacc
tgtggaacatgcatcactgagattgagaacattgatccgatccgaaccgcccccaagaga
cctgtaagttttcccactttggtaggaaataccttagtttatatggatgcggaagatgtg
aggatagattaccacaagaaggtactcatcgaagagacaaataccatagcacctttgctg
atgagctctgagatgctggatggtgagattaatctacttgaggactgtgtgagcaccatg
ctgatcctggaatcctatggaataaagcatcatacagcgaagagttacatgatactcgct
agagaaagaatagatctgggattgtgtcttacacgtttcagggagaagtcagtgtctctg
cgggtgctgctacctttccttacaacagtcatacccggttccttgaacgtcctgtgcgac
actcctgcaggctacatagaaaagttcaacactctagggtggactactgaggggaaaata
gagggctctacatcttctttcaggatcgatttttgggatcgagacattcccgtgagctac
ctatccacaataaatagcacccttgggggaattcccatgcaggtggctatgcacatagta
gggaggttccctagagtgctgtcctgcttagattgtcttgatatcttaaggaaaatgatt
caccagacagcacaattctcagtgaacataactctctgcgccatccacaacaacatgatg
aaaaggctccctattactaatgtgcatccagacaatgtcttgaagggtaggccagtatca
gatgagcctgatctatatggtctgacacctggaacaacagagatacaacaggtactacca
tctgatgaatcggacatggtggaactaccgaggcctaccagactgcaagaagtgggagag
cttctgcacaacaacctctggtccaatcttattcagaatttcataaccagtgtctggata
gacaggataatcatagataacacgttggaggcattggagatgctgatgggagcgctcaag
ataagagaagggttccagaaagatatctatatcctggttgatgagttgtcccaagaagag
acaggggtaatctatgagaagtttcgatcatccagacttcggggttgtcgggttgtgatc
atatatgatactgctgatataccttcaggggatatgcttctaatatctcaatctgagtcc
tggaagcaggatgaaactggcgggaaagaagtatatgtcatctatggcggatctcagctc
aacaggatggaagacgatatgaagaggagaatagaagaggtgtaccacgacaacagcttg
atacagacatctttcctgtctgtcgttcatcttggtgcataccctcggcatacagtaaac
ctatctgccctagctgcagtgatgaatcagggtgaagtttttgagagtgatagatatggt
ggtagaagtggaagatcgctgttcactacattgtctggcacgaggggattggtttccaga
tatcgcttcagaacaaggtatgagatgatcaatctgttccagagggggttggaaaagata
gaaaagattgacacctttcagaagggaagagtgaagacccctaagatccagatggagctg
atgttgctgtatgtgtcagctgttgctcactgccccgatgatcagtccgagtttgtgaag
aggataaagaggatgagactggattcaataagaggaaccatcaaaccggcacttcggcgt
gcagctttggaaagtcttgctagcagattctatctgggaatgagggactatctctccaaa
atagaacatatacaatttcacatagatgatctctctcaaggaataaactttaaaactcaa
aggagagtaggagtgaatctgatcggaagtatgtaa
DBGET
integrated database retrieval system
