Viruses: 11467407
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Entry
11467407 CDS
T40000
Symbol
GCLV_gp1
Name
(RefSeq) Garlic common latent virus; replicase
KO
K26628
Betaflexiviridae RNA replication polyprotein
Virus
47900
Garlic common latent virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
RdRP_2
Viral_helicase1
Peptidase_C23
AAA_19
UvrD_C_2
AAA_14
AAA_30
AAA_18
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
11467407
NCBI-ProteinID:
YP_004936159
RS:
NC_016440
UniProt:
G9CHA2
LinkDB
All DBs
Position
NC_016440:81..5936
Genome browser
AA seq
1951 aa
AA seq
DB search
MALTYRSPLEEVLTSFSASEQSLIAEPAITSYRGLERDLFHFFNYNVGPYAKEKLIGAGV
YLSPFSGVPHSHPVCKTLENHLLYRVLPSILDNSFLFVGIKESKLNFLRARHQNLSMVEL
VNRYVTSADRTRYPNDFHLSITAEQCFNRYDGFKHLGPGLRKLLPHCITVKPRRLFLHDE
LHYWCERDLVTFLSAVKPEKVLGTVVYPPELLKGVKFSLNKWCYDFDVEGDDLIFYPDGV
RTESYTQPLSGCFYLKVGTLKLLDGSVYHIDVVHSTFCHHLISITAGEAVRAPTNSFSNF
DATTCRGLPNIAFRSLGPCIAVPYPVISRVYRYLRTLQKPDLQSAMAKLSQIMPEPTGYQ
IKFMTEFSKMVIDTPVGASFFQVAIFEKFKGFLTTFFPKYVAARFDVARIRSLDEFVEHM
CPYTFKIKAVVHDMRLHQLLFPRDEEMPRDEDFDTIRALEMQWGGGANGERIGAAYTVGP
FCDYPVIDAQKVFQLLRVISREWSFSFSMVQYCERGDYTEFMQASKLIWFSSKLAGWDVC
LATYNKYVHMRHSDWKRRLKSFRSIGCAWFCMRVRSYERYICAYPDQAKSYKALDEAYST
VVADLLGSLARNKLIISAAAPKFDKTSKVPREGVAEEIPAHCARTSAAFASAPCGSTASS
ECCVFELNPPAQIADLSCSCDRTLAVLNVLAYEALELEFPDQLPGCRAGWYVKGPQVADV
GGFLGCQQLRWLDFFDSFLELHGAQPGSYNSCFAQVFDLDSTFEYHSGDGGVFEEGAPAY
LFQTRGTSRVHVQGLGCCGERALLGPMCFEMPASLLLEHRWKISKSSTGCTIMTFRKLRQ
GEPPVVETTAPTVQKGVGVDSSFTWEQYGVTILSSHMSKAPDGRIEPQRGDGSCFFHCME
PFTNLEASLLRRTIAKEMARDSKVLESDLVECQGNGPVSDGVIAYTIRFLGLKVRFFSPE
LNEVRKFSTCTATNFWVDVLHHGNHFDLLYPTNDCVLIALEQGLGRKRGDILKVLSRPQH
SDIFQIATGGVGLTLELLEPIFQCFQIDARVLCGSEVFTYPTSGTFALDFELADGHLSFK
SARRKETVSSCLKVVEASPHGRLVLNCAGTGVLFEICSNTAHKLAESLFDGRTGIVSSKL
FNNRERFEVSSTSLLPRTLNVICGVFGCGKSTLLCKALEKGLGVCIFVTPRRSLAEQMTQ
LVQSVETSTSVTILTFEKFLHQMVNVKEGSTIIFDEFQLYPPGYFDLVCSQLTDGISLHL
LGDPCQSDYDNAKDRGVFEGLLPDHQRILQGIQFRYATRSYRFSNPNFVGRLPCAISNTN
EDDFEDFEILEGIEQVQEIDVECYLVSSFIEKQAVRALVGLDKVVQTFGESTGLTYDCVA
VVVSEASKLASERRWITALTRARKRVTFITNLGCSKHLIAEIFSNRALGRFLSCTASIDN
LRCLLPGEPNFVEELVPTIGANLGVVEEKVSGDPWLKTMLFLGQVADVADEIDVDEALQI
EPFKTHVARSNLEGVRALWHDKIRLKEHREKRMGYLVSEQFTDMHSKNMGKKLTNAAERF
ETIYPKHKGSDTVTFIMGARKRLRFSKPAVEARKLMDASNFSEFMLQEFLKHVPLKKPHN
QAFMDASLADFEEKKTSKSAATIANHAGRSCRDWLIDTGLVFMKSQHCTKFDNRFRDAKA
AQAIVCFQHAVLCRLAPFVRYIERKIAEVLPEKFYIHSGKGLEELNAWVTRGRFEGVCTE
SDYEAFDASQDQYILAFELHVMKYLGLPRDLIEDYKFIKMHLGSKLGNFAIMRFSGEAST
FLFNTMANMLFTFLRYEIKGHERICFAGDDMCANARLRHRLDQEKFLGLLKLKAKVSFTQ
KPTFCGWNLCSDGIYKKPQLVLERLCIAKETNNLACCIDNYALEVAFAYKMGERAVLRMD
EEELQSHYNCVRIILQNKNLIKSNVLTYFSA
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atggcactaacataccgcagcccattggaagaggtactcacctcattcagcgcatccgag
caaagtttaatcgcagagccagccattactagttatcgaggattggaaagagatctgttc
catttctttaactacaatgtagggccatacgccaaagagaaactaatcggcgctggtgtg
taccttagtccattctccggtgttccacattcacaccccgtatgtaaaacccttgaaaac
cacttattgtacagagtattacctagtattttagataattcttttctttttgttgggata
aaagaaagtaaattgaacttcttgcgcgctcggcatcaaaatttgagtatggttgaatta
gtcaatcgttatgtaacaagcgcagacagaacaaggtaccccaacgatttccacctgagt
ataactgcagagcaatgtttcaatagatatgatggttttaagcacctgggtcccggattg
cggaaactcttaccgcattgtattacagttaaacccaggagactgttcttacatgacgag
ctgcactactggtgtgagagggacctggttaccttcctgtcagctgtcaaaccagaaaaa
gttctaggcactgtagtttaccctcctgagctgctcaaaggggtaaaatttagcctcaat
aaatggtgttatgatttcgacgtcgagggcgacgatttgatcttttaccctgatggtgtg
cgcactgagagctatacacagccattgagtggttgtttctatttgaaagtaggcacgctc
aagcttctagatgggagcgtttaccacattgatgttgtgcatagtactttctgccaccac
ttgatttcaatcactgctggtgaggctgttcgggccccaaccaattctttctccaacttt
gatgcgaccacctgtcgtggtttgccgaatatcgcgttcagatccttgggaccatgcatt
gcggtgccatatcctgttattagtagagtgtaccggtatttgaggaccttgcaaaagcct
gatttacagtctgctatggcgaaactctcgcagattatgcctgaacccactggatatcag
attaaatttatgacagagttcagcaaaatggttattgacacccctgttggagctagtttc
ttccaggtagcaatttttgaaaagtttaagggtttcctaacaactttttttccgaagtat
gttgctgcacgttttgatgttgctaggatccggtctttagatgaatttgtagagcatatg
tgcccttacacgttcaaaattaaagctgtcgtccatgacatgaggttgcaccaattgctc
ttcccacgggatgaagaaatgcccagagacgaagattttgatacaatccgggcactagag
atgcagtggggtggtggggcaaatggtgagaggataggtgctgcatacaccgttggccct
ttttgcgattaccccgttattgatgcgcagaaagttttccaactgctgcgagttatttca
cgagagtggtcattttcattctcaatggtccaatattgcgaacggggtgattatacagaa
tttatgcaagcatctaaattgatctggttctcttcaaaacttgctggctgggacgtgtgt
cttgcgacttataacaaatatgtgcatatgaggcacagtgattggaaacgcaggctgaag
agctttaggtctattggttgtgcttggttttgtatgcgagttagatcttatgagcgttac
atctgtgcgtaccccgaccaagcaaaaagttataaagctttggatgaagcatatagcaca
gttgtagctgacttgctcggaagccttgctcggaataagctaattatttccgctgctgct
ccaaagtttgataagactagcaaagttcccagggagggtgttgcagaggaaattcctgcg
cactgtgcgcgaacgagcgctgcttttgcttccgcaccatgcggctccacagcatcatcg
gaatgttgcgtttttgagctaaatccacctgctcagattgctgatcttagctgttcatgc
gatcgtactcttgctgtgcttaacgttttagcctacgaggctcttgagctagagtttcct
gatcagttacctgggtgccgagccgggtggtatgtcaaggggccgcaggttgcagatgtt
ggtgggtttctgggttgccagcaactcagatggcttgatttttttgacagtttcttagag
ctgcacggggcacaacccggatcttataacagttgttttgctcaagtttttgatcttgac
agcacttttgagtaccatagcggagatgggggtgtctttgaggagggagccccagcgtac
ctttttcaaacgcgtggtacttccagggttcacgttcaaggtttgggttgttgtggggag
cgggctctgcttgggccaatgtgcttcgagatgcccgctagtttattgcttgaacacagg
tggaagatatcaaagagttccacaggttgtaccataatgacttttaggaaactccgccaa
ggggagcctccggtagttgagactactgcacctacagtgcagaaaggggtaggcgtggat
tcatcctttacttgggagcagtacggtgtcaccatcttgagcagtcatatgagtaaagca
cctgatgggcgtattgaaccgcaacgcggcgatgggagttgttttttccattgtatggag
cctttcaccaatttagaagcctcgctcttacgtcggacaatagcaaaagagatggcgagg
gattctaaggttttggagagtgatctcgtagagtgtcaaggtaatggacccgtttcagac
ggagttatagcatacacaattagatttttgggtcttaaagtgaggtttttctctccagaa
ttgaatgaggtgcgcaaatttagcacatgcactgccacaaacttctgggtcgatgttttg
catcacgggaatcacttcgatcttttgtaccctactaatgactgtgtactgattgctttg
gaacaagggctcggccggaaacgcggggacattctcaaggttttaagcaggccgcagcac
tctgatatctttcagatagctactgggggcgtcgggttaactttggagttacttgagcct
attttccaatgtttccagattgacgctcgcgttttatgcgggtcagaggttttcacttat
cctacatctgggacttttgctttggattttgaactagctgacggtcatctttcgtttaag
agtgcacgcaggaaagaaacagttagctcctgcttgaaggtagtggaagcgagtccacat
ggtaggttggttctcaattgtgcaggtacaggtgtgttgtttgaaatatgctccaacact
gcgcacaagcttgcagagtcactttttgatggtcgtaccgggattgtgagctcaaaactt
tttaacaatagggaaaggtttgaggtcagctcaacttcattgctaccacgtactctaaat
gttatttgtggggtctttggttgtgggaaaagtacactgttgtgcaaggctttagaaaag
ggccttggcgtatgcatttttgttacaccgagacgtagcttagccgagcaaatgactcag
cttgttcagagtgtagagacttccacttccgtgaccattttgacatttgaaaaatttttg
catcaaatggttaatgttaaagaaggtagcactatcatttttgatgaatttcagttgtac
cctcctggctattttgatcttgtgtgtagccagctcactgatggtatctccctgcatttg
ctaggtgacccatgtcagagtgactatgataacgccaaggaccgaggtgtttttgagggg
ctgctgcctgaccatcagaggatcttacaaggtatacaattcaggtatgcgactaggagt
tatagattctcgaacccaaatttcgttgggcgtttgccgtgcgcaatttcgaacacaaat
gaggatgactttgaagactttgaaatacttgaagggattgagcaggtgcaggaaatagat
gttgaatgttacttagtctcaagcttcattgaaaaacaggctgtacgagcgctcgtggga
cttgataaagtagttcaaacctttggcgagagtactggcttaacatatgattgcgttgct
gttgtcgtttctgaagcttcaaaattggctagtgaacggcgctggatcacagccttgacc
cgtgcacgcaagcgagtaaccttcatcacaaatttgggttgttcaaagcatcttatcgct
gagattttcagtaatcgcgcacttgggcgtttcctctcttgtaccgcatccattgataat
cttcgttgcttactacccggggaaccaaattttgtcgaggaactagtgccaacgattggt
gcaaatttaggtgtggtggaggagaaggtcagtggtgacccctggttaaaaacgatgcta
ttccttgggcaagtcgctgacgtggctgatgaaatagacgtggatgaagctctgcaaatt
gaaccctttaaaactcacgtcgctagaagcaaccttgagggtgttcgagcgttatggcat
gacaagattaggctaaaggagcatcgcgagaaacgtatgggctaccttgttagtgagcag
ttcaccgacatgcatagcaagaatatggggaagaagctaaccaatgctgctgaacgattt
gaaacgatatatccaaaacacaaagggagtgatacggtcactttcattatgggcgccagg
aaaagattgcggttctccaagccagcagttgaggctcggaagttgatggatgctagcaat
tttagtgagttcatgcttcaagaattcctgaaacatgttccacttaaaaaaccacataac
caggcattcatggatgcttctcttgcggactttgaggaaaagaagacctcaaaaagtgca
gctactatcgccaaccatgcaggccgctcatgcagggactggttaattgacacagggcta
gtatttatgaagagccagcactgcacgaaatttgataatcgctttagggatgcaaaagcg
gcacaggctatagtatgtttccagcacgccgtactctgcagactagctcctttcgttcgt
tacattgaacggaagatagctgaagtgcttccagagaaattttacatacatagcggtaag
ggtttggaagaattgaatgcatgggtcactcgtggaaggtttgaaggagtttgtactgaa
tcagattatgaagcttttgatgctagccaggatcagtatatacttgcttttgagctacat
gtcatgaaataccttggattgcctagggacctcatagaagattacaagttcattaaaatg
cacctagggtcaaaacttggcaatttcgctataatgagattctctggggaggcaagtacc
tttttgttcaatacaatggcaaatatgctttttaccttcttgagatatgagatcaaaggc
catgagcgtatctgttttgcaggtgatgacatgtgcgccaatgcccgactccgccaccga
cttgaccaggagaagtttctagggttgctcaagctaaaggcaaaggtatcatttacgcaa
aaaccaactttttgcggatggaacttatgttcagatggtatttacaagaaaccacagctt
gtgcttgagaggttgtgcatagcgaaagagaccaataaccttgcttgctgcatagataat
tatgcacttgaggtagcttttgcttacaagatgggtgagcgggctgttctgcgtatggat
gaagaagagttacagagtcattacaattgcgtgaggatcattctgcaaaacaagaatcta
ataaagtccaatgttctcacctacttctccgcttag
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integrated database retrieval system
