KEGG   Viruses: 12413947
Entry
12413947          CDS       T40000                                 
Symbol
ORF42, YOO_gp43
Name
(RefSeq) Equid alphaherpesvirus 8; major capsid protein
  KO
K26014  Herpesviridae major capsid protein
Virus
39637  Equid alphaherpesvirus 8
SSDB
Motif
Pfam: Herpes_MCP
Other DBs
NCBI-GeneID: 12413947
NCBI-ProteinID: YP_006273022
RS: NC_017826
UniProt: I1V8F6
LinkDB
Position
NC_017826:76597..80727
AA seq 1376 aa
MDRRSEAFKIPVPEVIPAGQILSTIEVSSHRTLFDFFKQIRSDDNGLYAAQFDVLLGTYC
NTLTLVRFLELGLSVSCVCTKFPELNYVNDGTIQFEVQQPMIARDGPHPVDQPTHTYMMK
HIEQRSLSAAFAIAAEALGLIGGTTLDGTQISSSLRVRAIQQLARNVQTVLDSFERGTAD
QLLRVLLEKAPPLTLLAPLQIYRDEGRLASRVNRAVLVSELKRRVVEDTFFLTKHERNRK
ELVVARLAELVNCTAPSVAVTRMTHSDTKGRPVDGVIVTTAGVRQRLLQGILTLEDMAAD
VPVTYGEMMITGTNLVTALVMGKAVRNLDDVAHHLLGMQRDQVRANEKLIKDYEDVPSTA
RVRADLVLVGDRLVFLEALEKRVYQATNVPYPLVGNLDLTFIIPLGIFKPATDRYSRHAG
SFTPTPGQPDPRTYPPQTVYFFNKDGNLVQLSFDSAAGTVCHSSFLDVDSVLVAIRREPH
ELHCAFGAYVTLPPAGTLLDQMRRFFERWHMLMPARPRWAVEALMTIDQLLSPGNANLRL
ELHPAFDFFVAPADVAIPGPFDMPNVMPTVMAMPRLINGNIPLPLCPVEFRDSRGFELSV
DRHRLSPATVMAVRGAFRDANYPMVFYIIEAVIHGSERTFCALARLIIQCIVSYWRNTHQ
VAFVNNFYMIMYINAYLGNGELPEECTAIYRDLLEHVQALRRLVAEYTVPGEAVGGQGHD
ALNNVLLDPALLPPLIWDCDPILHRADMGRARAQDLWVDGVNYAAIPWVEMAEVNFGNTG
GHLVHNRPIRGENKRNPIVPHHDPEWSVLSKIYYYAVVPAFSRGNCCTMGVRYDRVYPLV
QTVVIPDLGAEEIAPTSPSDPRHPLNPRHLVPNTLNILFHNARVAVDTDALLLLQEVVTN
MAERTTPVLATAAPDAGTATAVTQEMRTFDGTLHHGILMMAYQRNDETLLEGTFFYPAPV
NALFACPEHLGALPGLNAEVLEAARDVPPVPHFFGGNYYATVRQPVAQHAVQSRADENTL
TYALMAGYFKLGPIALSHQFATGFHPGFAFTVVRQDRFLAENILFAEKASESYFMGQLQV
NRHEAVGGVNFVLTQPRANVDLGVGFTAAYAAAALRTPVTDMGNLPQNLYLTRGTIPMLD
GDADAYLRRVVNTGNRLGSQGPRPIFGQLMPATPAGVAHGQAAVCEFIVTPVSADLNYFR
RPCNPRGRSAGPVYACDGEADAVDVMYDHTQGDPAYPSRATVNPWASQRNSYGDRLYNGK
YNLNGASPVYSPCFKFFTPTEVEAKGRNMTQLIADVSASVAPSTSNTEIQFKRPHGSTDL
VEDPCSLFQEAYPLLSSTDTALLRTPNIGEIGADEGHFAQYLIRDESPLKGCFPRI
NT seq 4131 nt   +upstreamnt  +downstreamnt
atggaccggcgctcagaggcgttcaaaattccggtaccagaagtaatccctgccggacaa
attttatcaactatagaagtgtcgtcccaccgcactctatttgactttttcaagcaaatt
cgctcggacgataatggactctatgcagcgcagtttgacgtgctactcggaacgtactgt
aacacgctaacgctggtgcgctttctggaactaggattatccgtatcgtgcgtgtgcacc
aagtttccggagcttaactacgttaatgatggcaccatccagtttgaagtgcagcagccg
atgatagctcgagatggcccccatcccgtggatcagcctactcacacctacatgatgaag
cacatcgagcagcgatctcttagcgcagcttttgctattgctgcggaggccctgggcctt
atcgggggcacaaccctagacggtacgcagatctcatcgtcactgcgggttagagctata
cagcagctggccagaaacgtgcagactgtgctagactcgtttgagcgcggaaccgccgat
caacttttgcgtgttttgctggagaaggccccccctctgactctcttggctcccttgcaa
atttaccgcgacgagggccgcctggcgtctcgagtcaatcgcgcagtgctggtctcggag
ctcaaacggcgagtggtagaagacaccttttttctcaccaagcacgagcgtaacagaaag
gagctggtggtagcccgcctggctgagctggttaactgtacagccccctccgtcgccgtt
actagaatgacccattctgacacaaagggaagacccgtagacggggtaatcgttacaact
gctggcgtgcgccaacgcctcttacaggggattctaactttggaagatatggccgccgat
gttccggttacgtacggcgaaatgatgattaccggcacaaacctagttacggctctcgta
atgggcaaggcagttagaaacctggacgacgtagcacaccacttactggggatgcagcgt
gatcaggtcagggcaaacgaaaaacttatcaaagactacgaggatgtacccagtacagcg
cgagtgcgtgccgacctcgttctcgtgggggaccgcttagtctttctggaggccctggaa
aagcgcgtgtaccaggcgaccaacgttccgtacccgcttgttggaaatttagatttgacg
tttatcattcccctgggcatcttcaagccggccaccgacaggtattcgcgccacgcggga
agctttacgccaaccccggggcagccagaccctcgcacctacccaccccaaaccgtttac
tttttcaacaaggacggaaatctcgtacagctatcctttgacagcgctgctggaaccgtg
tgccacagctcgtttttggatgtggattctgtgttggtggccatccgacgagaaccccac
gagctccactgcgcgtttggagcctatgtgaccctacccccagccggtactctgcttgac
cagatgagaaggttttttgagcgatggcatatgctcatgcctgcgcgcccacgctgggcc
gtggaggcgctaatgaccatcgaccagcttctctctccaggcaacgcaaacctgcgactg
gagcttcacccagcctttgatttttttgtggccccggcggatgtcgccattcccgggccg
ttcgacatgccgaatgtcatgcccacggtgatggccatgccgcgccttattaacgggaac
atcccactccccctatgtcctgtggaatttcgcgacagtcggggcttcgaactgagcgtg
gataggcacaggcttagcccggcgacggttatggccgtgcgcggagcgttcagagacgcc
aactaccccatggtgttttacatcatcgaggcggtgattcacgggagcgaacgcacgttc
tgtgcgctggctagacttataattcagtgtatcgtcagttactggcgcaacacccaccag
gtagcgttcgttaacaacttttacatgatcatgtacataaacgcatacctaggaaacggt
gagctgccagaggagtgcacagctatctaccgcgaccttttggagcacgtccaggctctc
aggcgactcgtagcagagtacactgttccaggggaagccgtgggcggccagggacacgac
gcgctgaacaatgtgctgctcgatccggccctgctaccgccactcatctgggactgcgac
ccaattctgcacagggctgacatgggtagggctagggcacaggatctatgggtggatggg
gtaaactacgccgcaattccctgggttgaaatggccgaagttaactttggaaacaccggc
ggccatttggtgcacaacagacccatccgcggagagaacaagagaaacccgattgtgcct
caccacgacccagagtggtcggtgctatccaagatatactactacgctgtggtgcctgca
ttctcgcgcggtaactgctgtaccatgggagtgaggtacgaccgcgtttacccgctcgtt
cagacagttgttatcccagacttgggggcggaggaaattgccccaactagccctagcgac
cctcgccatccgctaaacccgcgccacctagtgccaaacacgctgaacatcttgtttcac
aacgccagagtggccgtcgacaccgacgccctgctgctcctccaggaggtagttaccaac
atggcggagcgcactactcccgtgctggcaaccgccgcgccagacgcgggaactgccacc
gccgtgactcaggaaatgcgcacctttgacggaaccctccaccacggcattctgatgatg
gcctaccagcgtaacgacgaaactcttttggaggggaccttcttttacccagcccccgtt
aacgctctctttgcctgccccgagcacttgggggctcttccagggcttaacgcagaagtc
ttagaggctgctagggacgtgcccccggttccccacttttttggtggaaactactacgct
acagtcagacaacccgtggcgcagcacgccgtacagagccgcgcggatgaaaacacgcta
acgtacgcgctgatggcagggtacttcaaacttgggccaatagctctatctcatcagttt
gccacggggttccacccagggtttgcctttacggttgtgcgccaggacaggtttctcgcg
gagaacattctctttgcagagaaggcgtctgaatcgtacttcatgggccagctacaggtt
aaccgccatgaggcggttgggggggttaactttgttctcactcaaccacgggctaacgtg
gacttgggagtgggctttactgccgcgtatgcagccgccgcgctacgcacgcccgttaca
gacatgggaaatctgccccagaacctgtatctaacacgcggtacgatacccatgctagac
ggggacgcggatgcgtatctgcggcgcgtggtcaacaccggaaatcgcctggggtcccag
ggccccaggccaatctttggacagctaatgccggccactccggctggcgttgcccacggc
caggccgctgtgtgtgaatttatcgtcacgccggtgtctgcagacttaaattattttagg
cggccgtgcaaccccagaggaagaagcgccggaccggtgtacgcgtgcgatggagaggcc
gatgcagtggacgttatgtacgaccacactcagggcgatccggcctacccaagccgcgcc
accgttaacccgtgggcgtcccagcgcaactcttacggcgacagattgtataacggcaag
tataacctaaacggggcatcgccggtatacagtccatgttttaagtttttcacacccact
gaagtggaagccaagggacgtaatatgacacagctcatagccgatgtcagcgccagcgtc
gcccccagtacgtctaacaccgaaatccagtttaaacgcccccacggctcgactgacctg
gtggaggacccatgttcgctgtttcaagaagcatatccgctactcagctctacggacacg
gccctactacgcacgcctaacatcggtgaaatcggcgccgacgaaggacatttcgctcag
tacctaattcgcgacgaatccccgctaaaaggctgttttccgcgaatttag

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