Viruses: 12413961
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Entry
12413961 CDS
T40000
Symbol
ORF56, YOO_gp57
Name
(RefSeq) Equid alphaherpesvirus 8; capsid portal protein
KO
K26020
Herpesviridae portal protein
Virus
39637
Equid alphaherpesvirus 8
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_UL6
CENPU
Motif
Other DBs
NCBI-GeneID:
12413961
NCBI-ProteinID:
YP_006273036
RS:
NC_017826
UniProt:
I1V8H0
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Position
NC_017826:complement(98997..101072)
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AA seq
691 aa
AA seq
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MLFKEILMGELGYTEGQGVYNAIRSTEAAIRQIQTTILTNTLNATRYEDLAKDWQTHLDS
RGVSAEEIAATYGMYSEGEAVRVAEQIFATWHRTLQMSLLDFVRSITACFSASEPDGTAS
FAKYIDWIACLGLIPLQRLKRAPGATVHPKLWRKLPTDVPSLESCVDERDLAGKLYVANS
LLREGLEAVVELARCTASVAIMDYDRVNIFYHYTRREVVAIDSTTGKRGECLVLWQPIWK
DGSVLFDSPLQRISSEVCNCHALREHAKLCQLLNTVPVKILVGRKRDDAQGPGWASKAVD
KLMGEGEELHSSSAASRLVKLIVNMKSMRHIGDITETVRSYLDETSTNLLSGAQVDTSLP
GFGQSGKTKQSGNMPVQEAFRTSVINGINGMLEGYVNNLFKTIEDLRAGNSGLLDQLRDR
ESEVTHLREQLLRVSQAAADGSPQPSVSSGAAPESGAKAGAGGLGHEVIDIRNLMGEDGY
VANSFQSRYIPAYTADMERLSRLWDQELLRCFKMNRITNNQGQEMSVSYSNSSISLLLAP
YFFSILRARHLGFLITHQEAYRSEEELCVAVFKKTRLEAYLTELSTLFVAKVRNSIAALN
STKRGLPVNDNEAKSDDEQRDKPSDERYSEGRDRSASPQRDRGRIGRGYHKRQRFSNNYR
RRSGLARNSSIRDRSQRGSRITPLLYDHIGH
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcaaagagatcctcatgggggagctagggtacacagaaggtcagggagtatac
aacgcaattaggtcaacggaagcggcgattagacagatacaaacgactattctgaccaac
actcttaacgctacgcgctacgaggacctcgcaaaggattggcagacccacttagacagc
cgtggtgtgagcgcggaggaaatagccgcaacctatggaatgtacagtgagggcgaagca
gttcgagttgcggaacagatttttgccacgtggcatcgcacgttgcagatgtcgctctta
gactttgttcgcagtataaccgcgtgtttttctgccagcgagcccgacggcaccgccagc
tttgccaagtacatagactggatagcctgtctgggtctgattccgctacagcggctcaag
cgcgcccccggcgcaaccgtccacccgaagctgtggcgtaagctgcccacggacgttccc
tcgctcgagagctgcgttgacgagcgcgacctggctggtaaactgtatgtggccaacagc
cttctacgagaggggcttgaggcagtggtggaactggccagatgcacagccagcgtggca
atcatggactacgacagggtgaacatattctaccactacacccgcagagaggtggtggca
atagactcgaccacgggcaagcggggagagtgtctggtgttgtggcagccaatatggaag
gacggaagcgttctttttgactcaccgctacagcgaatctccagcgaggtgtgtaactgc
cacgccctacgagaacacgccaaactgtgccagctcttaaacacggtacccgtcaaaatt
ctggtcggcagaaaaagggacgatgcccagggcccggggtgggcctccaaagctgtggac
aagctcatgggcgagggcgaagagctacattccagctccgccgcgtcgcggctggttaaa
ctcatcgtcaacatgaaaagcatgcggcatataggagacataacagaaacagttagatcg
tatctagacgagacaagtaccaatttgctcagcggtgcgcaggtagacacctccctgcca
ggatttggacagagcgggaaaaccaaacagagtggtaacatgcctgtgcaagaagccttt
cgcacgtctgttatcaacggcataaacggaatgttggagggatacgtaaacaatctgttt
aaaaccatagaggacctgagggccgggaatagcgggcttctggaccagctccgggaccga
gagagcgaggtcacccacctccgcgaacaattactgcgcgtctcccaggcggcggccgac
gggagtccccagcccagtgtgagctccggtgcagctcccgagagtggcgccaaggccggc
gcaggaggactagggcacgaggttatcgacataagaaacctaatgggagaggacggctac
gtggccaatagttttcagtctaggtacataccggcgtacacggccgacatggagcgccta
tcgcgcctgtgggatcaggagttactacgctgttttaaaatgaacagaataaccaacaac
cagggtcaggaaatgtccgtttcctactccaacagctcaatctccctactgctcgcgcca
tactttttctcaatcctcagggcgcgtcatcttggatttttgattacacaccaggaggcg
taccgctcggaggaggagctgtgtgtggcggtgttcaaaaaaacccggctcgaggcttat
cttacagagttatctactctctttgtggcaaaagttagaaactcaatcgcggctctaaat
tccacaaagcgaggcctgccagtcaacgacaacgaggccaagtctgacgatgaacagcga
gacaaaccgagtgatgagcgctactctgagggacgagatcgatccgctagcccacagcgc
gaccgtggacgaattggtaggggctatcacaaaaggcaacgattcagtaacaactatcgt
cgacgatctggtctggcacgcaactcctcgattcgtgacagaagtcagagaggttccagg
attacccccctcctttacgaccacatcggtcactga
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