Viruses: 12977914
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Entry
12977914 CDS
T40000
Symbol
11R, A190_gp005
Name
(RefSeq) European catfish virus; DNA dependent RNA polymerase a subunit
KO
K26368
Iridoviridae putative DNA-directed RNA polymerase [EC:
2.7.7.6
]
Virus
84739
European catfish virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-GeneID:
12977914
NCBI-ProteinID:
YP_006347602
RS:
NC_017940
UniProt:
I2BFJ1
LinkDB
All DBs
Position
NC_017940:6648..10544
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AA seq
1298 aa
AA seq
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MEMFASKSLQVEGLLFGVCSPEEILATSVVEVTKSCLKAETGSVYDPRMGSAGGDDEDAL
CPTCENTGRECPGHFGHIELAEPVVFFYKETVAWLKRCCHVCGTVGNEPRPFFFAPYSAC
DACGAQRPLVRLADAHDPCAIRVTVRRKDGEPETMPPELILATLDRVRDSDVDRVLGRGK
GSHVRFHPRRLVMTRMPVLPPCCRPNARQWPDGAMQDDNLSVFVSQIVKVNQRIKALEHD
DPAVEGLVAQLRLKTLCFVDNTKGKVMHTTNRKPMVGIKERIGKKGGLLRQNIMGKRRNQ
TGRSVVGPDGTLEVDEVGVPEAIADNLTVPVMVTPFNVSSLEAMMREGRVSSVETRDGTV
HRPSEWRPSHGDHMETADGSPLGRVTRPSYDARDPSVVLRSWKTGETVTRPPPFSWPKLE
PGMTVTRCLVDGDPVALNRQPTLHRNSMLGMRVKRLPGKTIRLNLSVTSGFNMDFDGDEG
NLYLPQGPQARSETMLLMNPKSVIMSARGPHAEVSLVQDGVLGCHLMSLNSAIPCPPEEL
AACLMEVRGCEGWDVRAVEKGATPRDLLSSVLPSTLTVDCGGGCRIEYGKIVSGHLTKSA
VKKIVRAVCLENGGDAAGKLVDKLQFLTNAWLSHRPFSVGYSDCLTERPEETVRMVDDAV
CSKILEAEAADDEDGVSVALCGARDRGQAVTCAALTPDNRMAVMSRAQSKGDMFNLTQIA
GLLGQQYVGGSRPGKEIDGGRRSLPHYPRVWDSEQTTLKYESRGFVRSSFLKGLNPREVF
FHAKSGREGMISTSQMTGVTGYAERKMVKLNEDLVSAYDGTVRDAMGNVVQFVYGGHGMD
PQRCWSDGCPVNFKTLAEECSSQECSSQECSSQISGLRSPAVTSVEEASLLVPVGLCPGA
PDPVRESLILKHASVILKGADEHPCEDHSAWRERVARSYAAAVLCPGEAVGVLCAQSIGA
KQTQQTLDTFHKAGGWLDDAGSVPFGELLGLSQKPMRRQCVVPLKVDPSTPGDELRDLVG
CSFVRRDLLDLLAVRPSTATVGKTASLELDPVKCFELRISPADVAYAVAEKFPPPHFDVS
VSSFGVTLSWSANCPVDNLFTGLFSVQVGGTPGVESYRLLRGRDGGWVAVTKGTNLGAFL
CHPLADWERVRTDDVWDVYETLGLAAAKKRLYELMFSCVGDNLYPAHVKLLTDRMMRRGR
PTPIDRYTMRTCEVGPLSRAAFEESLDILTGAGCTAETEHCAGAGARVAVGLPVRAGTGY
MGLLCGKGFFDEPVVKVPEADGREYVDYSYSDDESFEW
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtttgcatctaaatctcttcaggtggaagggctcctctttggcgtttgctcg
cccgaggagatcctggccacctcggtcgtggaagtcaccaagtcctgcctcaaggcagag
acggggtccgtctacgaccccaggatgggatcggcggggggcgacgacgaggacgcactg
tgcccaacgtgcgaaaacaccggacgtgagtgcccgggacactttgggcacatagagctg
gcggagccggtggtgttcttttacaaggagactgtcgcttggctcaagaggtgctgtcac
gtctgcgggacggttggaaacgaacccaggcccttctttttcgccccgtactctgcgtgc
gacgcgtgcggggcccagaggccgctcgtgaggctggcagacgctcacgatccctgcgcc
atcagggtgactgtcaggagaaaggacggcgagcccgagacgatgcctcccgagctcatc
ctggccaccctggacagggtgagggactctgacgtggacagggtcctgggcaggggaaag
ggatctcacgtcaggttccaccccaggaggctggtcatgaccaggatgccggtcctgcct
ccctgctgcagacccaacgccaggcagtggccagacggcgccatgcaggacgacaacctc
agcgtctttgtgtctcagatagtcaaggtaaaccagaggataaaggccctggagcacgac
gaccccgccgtcgagggtctggtggcccagctcaggctcaagaccctgtgctttgtggac
aacaccaagggcaaggtcatgcacaccaccaaccgcaagcccatggtgggcatcaaggag
aggataggaaagaagggagggctcctcaggcagaacatcatgggcaagaggaggaaccag
actggcaggtcggtggtgggtccagacggcaccctggaggtggacgaggtgggggtgccc
gaagccatagccgacaacctgactgtgcccgtcatggtaacccccttcaacgtctcttct
ttggaggcgatgatgagggagggcagggtctcttcggtggagacgagggacgggacggtg
cacaggccctccgagtggagaccctctcacggggaccacatggagacggcggatggatct
cccctgggcagggtgaccagaccctcgtacgacgcccgggacccgtcggtggtcctgagg
agctggaagacgggggagacggtgaccaggccgcctccgttttcgtggcccaaactggag
cccggcatgaccgtgacgaggtgcctggtggacggggatcccgtggccctcaacaggcaa
cccaccctgcacagaaactctatgctgggcatgagggtcaagaggctccccggcaagaca
atcaggctgaacctgtctgtcacgagcggctttaacatggatttcgacggggacgagggc
aacctctacctcccgcagggtccacaggccaggtccgagacgatgctcctcatgaaccca
aagagtgtcatcatgagcgccaggggtcctcacgcagaagtgtccctggtgcaggacggc
gtgctgggctgccacctcatgagcctaaactctgccatcccctgccctcccgaggagctc
gcggcctgcctcatggaggttcgcggctgcgagggttgggacgtgagggccgtcgagaag
ggagcgacgcctagggacctcctgtcctctgtcctcccgtccaccctgactgtggactgc
ggaggagggtgtaggatagagtatggaaagattgtctctggccacctcactaaatctgcg
gtgaaaaagattgtgagggcagtgtgcctcgagaacggaggggacgcggcggggaagctg
gtggacaagctccagttcctaaccaacgcctggctgtctcacagacccttttcggtgggg
tactctgactgcctgacagagaggcccgaggagacggtgaggatggtggacgacgcggtg
tgctccaagatcctggaggcggaggcggcggatgacgaggacggggtgtctgtggccctg
tgcggggccagggacagggggcaggcggtgacgtgcgccgcactcacccccgacaacagg
atggccgtcatgtccagggcccagtccaagggggacatgtttaacctgacgcagatagcg
gggctcctgggccagcagtacgtgggagggtcgaggccgggcaaggagatagacgggggt
aggaggagcctcccccactaccccagggtgtgggactcggaacagaccaccctcaagtac
gagtcgaggggattcgtgagatcttcgttcctcaagggcctcaaccccagggaggtgttt
tttcacgcaaagtccggcagggagggcatgataagcacatctcagatgactggggtcacc
ggctacgccgaacgcaagatggtcaagctcaacgaggacctggtctctgcctacgacggc
acagtgagggacgccatggggaacgtggtgcagtttgtctacggcgggcacggcatggac
cctcagaggtgctggtcggacggatgtcccgtaaactttaagaccttggctgaagagtgc
tcatcgcaagagtgctcctcgcaagagtgctcctctcagatctcaggtctcaggtccccg
gcggtgaccagcgtagaggaggcttccctcctggtgcccgtcggactgtgccccggcgct
cccgatccggtgagagagtccctcatcctcaagcacgcctccgtcatcctgaagggagcg
gatgaacacccgtgcgaggaccactctgcctggagggagagggtggcgaggtcctacgcg
gcggcggtcctgtgtccgggagaggctgtgggtgtcctgtgcgcccagtccataggagcc
aagcagacccagcagaccctagacaccttccacaaggcgggagggtggttggacgacgcg
gggtccgtgcccttcggggagctcctgggcctcagtcagaaacccatgaggaggcagtgc
gtggtgccgctgaaggtggacccctctactcccggggacgagttgagggacctggtgggg
tgctcgttcgtcaggagggacctcctggacctgctggccgtcagacccagcacggccacg
gtgggaaagactgcgagcctcgagctggatcccgtcaagtgcttcgagctgaggataagt
cccgcggacgtggcgtacgcggtggccgaaaagttcccccctcctcactttgacgtgtcc
gtctcctcctttggagtgacgctgtcctggtccgcaaactgccccgtggacaacctcttt
acgggtctcttttcggtgcaggtcggcggcactcccggtgtagagtcctacaggctcctc
aggggcagggacggagggtgggtggcggtgacaaaggggaccaacctgggagcgttcctg
tgccaccccctggcagactgggagagggtgaggacagacgacgtgtgggacgtgtacgag
accctggggctggcggcggccaaaaagaggctgtacgagctaatgtttagctgcgtgggg
gacaacctgtacccggctcacgtcaagctcctgacggacaggatgatgaggaggggcagg
cccactcccatagacaggtacaccatgaggacgtgcgaggtcggacccctgagcagggca
gccttcgaggagtccctggacatcctgacgggagccgggtgcacggcggagactgagcac
tgcgccggagccggagcgagggtggcggtgggtctgcccgtgagagccggtacggggtac
atggggctcttgtgcggcaagggtttctttgacgagcccgtggtgaaggtgccggaggcg
gacggcagagagtacgtggactattcctactctgacgacgaatcctttgagtggtga
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