Viruses: 12977927
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Entry
12977927 CDS
T40000
Symbol
58R, A190_gp059
Name
(RefSeq) European catfish virus; DNA dependent RNA polymerase b subunit
KO
K26369
Iridoviridae putative DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Virus
84739
European catfish virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Stm1_N
Motif
Other DBs
NCBI-GeneID:
12977927
NCBI-ProteinID:
YP_006347650
RS:
NC_017940
UniProt:
I2BFN9
LinkDB
All DBs
Position
NC_017940:49086..52760
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AA seq
1224 aa
AA seq
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MSRGMTTEGASLTAAASSSASAWLTESTPSTPSSPSSSGSSYPALSTFSSCSNSASSPDE
SDPMSEMSPKISVASMILLKDLEEFLHLYVSSANMHPSNFVRHHIESFDDMLWNEFPAMV
AREKPVSVKGYRVKFGTVRYEPPCPDGKPWEKLTPAMARRTDATYHSAAVCDLTVTDPKG
LETVYPRLELCKIPVMVGSAVCWTRTEGSPLPGECPSDPGGYFIIKGKERVVVPHIRPAY
DQPCVYKNDEGWLCEFRSVNRETRQTVLVQAKTDCRRKLEFSLPYIKQYVPVGLVFKALG
KTARESVAMCGLGSFSGDEVSCRTVHHQSMAALLMEQHASAPEDPVADLAKHVPDGRSVY
SKQAEGAKQAEGADRASVEEDRNSKGSKEDYVRHVLAGEIFLHGGDAAEHLGWMVKRMAD
VASGIGTCTDRDDLANKRVDATGPLIAFLLDGLLKQYVKLFVKSAGCQKNLCPYTVLQNS
MVMTNSLHMCFTTGNWTVKRLGPPSYVRVGVSQVLSNNNYGARVSHLRRIMHAVSFRGKN
IRMRQLHSSHYGFLCPYETPEGEKVGIVLNMAEGAGFSLETPREAVLATVRLGKGLPGFF
EGAPARLAWSGAAGSASVDVDGVLCGVTGDPAGFVREARFCLPGVSVVWKKVEREIHLLG
CQGRFVRRVLDPEGIRGPGYDSPPAPEEREIKMDPAPSSSPSDSLPRPPGVYVCAQELSV
CSLGDGEYADPPASEILTDAMSSVIPFYDHTQSPRNAYQSNMGKQAIGFPAVNCSDRYDA
TLHRLDYPQKSLVDSRSVKRLGFDEMAHGALPVVAIMTAGGFNQEDSVVLNASSLDRGLF
SCVTYRTVSCADKRRTKYDSEVVCLPDWGLRNREWDYDLLGDDGVIDPSCAGALARRAEG
KRKVAKRSADQRTGGGSAGLCDALWIPAGTVLVGKVSHSLGPGGNPVRRDASLTVKQSEE
GYLDRVTVDVDSDGKKLVKVRLRTPRHPEMGDKFASFTAQKGTCGAVLTQEDMPFDKDGV
VPDLIINPHAFPSRMTVNYLLQMCFGTAACKLGKTYDATAFEREDVVRDIAEAAKEAGID
CWDSVLHSGSTGRRLPTKIFMAPCPYQRLRHMVSGKMHSRTHGPTDALTRQPVAGRSREG
GIKIGEMEQWCKISHGASESLKESVYDTSDKYEVPVCKECGRISDHFEYCRMCDATDVSL
VKLPYTTKILFQELRSIGISIAFK
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaggcatgactaccgagggcgcctccctgacggcggcggcctcctcctcggcc
tcggcctggttgactgaatcgactccgtcgaccccgtcgtccccgtcgtcatcgggctcc
tcataccctgccctctcgacgttttcgtcgtgctcaaactctgcctcgtcaccggacgag
tcggacccaatgtctgagatgtctccgaaaatatctgtcgcgtccatgattcttttgaaa
gacctggaagaattcttgcatttatacgtttcaagtgcaaacatgcatccatccaatttt
gtgagacatcacatcgagtctttcgacgacatgctgtggaacgagttcccggccatggtg
gccagggagaaacccgtcagcgtcaagggctacagggtaaagtttgggaccgtgaggtac
gagcccccgtgcccagacggcaaaccctgggagaagctcaccccggcgatggccaggagg
accgacgccacctaccactctgcggcggtgtgcgacctgacagtcacggaccccaagggg
ctggagactgtctaccccaggctggagctgtgcaagatacccgtcatggtcggttcggcc
gtgtgctggaccaggaccgaggggtcacctcttccgggagagtgcccctccgaccccggc
ggatactttattatcaagggaaaggagagggtggtggtgcctcacatcaggcccgcctac
gaccaaccctgcgtctacaagaacgacgaggggtggctgtgcgagttcaggagcgtcaac
agggagacgaggcagacggtcctggtccaggccaagactgactgcaggcgcaagctagag
ttttccctgccctacatcaagcagtacgtgcccgtgggactggtctttaaggcccttgga
aagacggcgagggagtccgtggccatgtgcgggctggggtccttttcgggagacgaggtc
tcgtgcaggacggtccaccaccagagcatggcggccctcctcatggagcagcacgcgtcc
gcccccgaggaccccgtggcggatctggccaagcacgtccccgacggcaggtccgtctac
tcgaagcaggccgaaggcgcgaagcaggccgaaggcgccgatcgggcctctgtggaagag
gaccgcaactccaagggctcaaaggaggactacgtcaggcacgtcctggccggagaaatc
tttctccacggcggagacgctgcggagcacctggggtggatggtcaagaggatggcggac
gtggcgtcgggtatagggacctgcacagacagggacgacctggccaacaagagggtggac
gccaccgggcccctcatcgccttcctcctggacgggctcctgaagcagtacgtcaagctg
tttgtaaagtccgcggggtgtcagaagaacctgtgcccctacacagttttgcaaaactct
atggtcatgaccaacagcctgcacatgtgcttcaccacaggcaactggacagtcaagagg
ctcggccccccttcttacgtgagggtcggtgtgtctcaggtcctctccaacaacaactac
ggagccagggtgagccacctcaggcgcatcatgcacgccgtgagcttcaggggtaaaaac
atcaggatgaggcagctccactcttctcactacgggttcctgtgtccatacgagacgccc
gagggagaaaaggtgggtatagtcctcaacatggccgagggggcggggttctccctggag
acgcccagggaggccgtgctggccaccgtcaggctgggaaagggcctgccgggcttcttt
gagggcgctcccgccaggctggcgtggtccggcgctgcggggtccgcgtctgtggacgtg
gacggggtcctgtgcggcgtgacgggtgaccccgcggggttcgtgagggaggccaggttc
tgtctccctggcgtgagcgtagtgtggaaaaaggtggagagggagatacacctcctcggg
tgccagggaaggttcgtgaggagggtgttggacccagaggggatcagggggcccggatac
gacagtcctccggcccccgaggagagggagataaagatggaccccgctccctcctcgtcc
ccgtcggactctctccctcgccctccaggagtctatgtgtgcgcccaggagctgtctgtg
tgctctcttggggacggagagtacgccgaccctcccgcctctgagatactgactgacgcc
atgtcttcggtcatacccttttacgatcacacccagagccccaggaacgcctaccagtcc
aacatggggaagcaggccataggcttccccgccgtaaactgctcagacaggtacgacgcc
accctgcacaggctggactaccctcaaaagagcctggtggactctaggtccgtaaagagg
ctgggtttcgacgagatggcccacggggccctgccggtggtggccatcatgacggcggga
ggcttcaaccaagaggacagcgtggtcctcaacgcctcctcgttggacaggggcctcttt
tcctgcgtcacctacaggaccgtgtcctgcgccgacaagaggaggacaaagtacgacagc
gaggtggtgtgcctccccgactggggcctgaggaacagagagtgggactacgacctgctg
ggagacgacggggtgatagacccgtcgtgcgcgggggccctcgccaggagggcagaggga
aagagaaaggtggccaagaggtccgcggaccagaggacgggaggaggttccgcgggactg
tgcgacgccctgtggataccggcgggcacggtcctggtggggaaggtgtctcactccctg
ggaccgggaggcaaccccgtgaggagggacgcatccctgactgtgaagcagtccgaagag
ggctacctggacagggtgactgtggacgtggactctgacggcaagaagctcgtcaaggtg
aggctgaggacccccaggcacccagagatgggcgacaagtttgcgtcgttcacggcgcaa
aaggggacgtgcggagccgtcctgacccaggaggacatgcccttcgacaaggacggggtg
gtgcccgacctcatcatcaacccccacgcctttccatccaggatgaccgtaaactacctc
ttgcagatgtgcttcgggaccgcggcgtgcaagctgggcaagacctacgacgccaccgcc
ttcgagagggaggacgtggtgagggacattgcggaagcggcgaaagaggctggtatagac
tgctgggacagcgtcctccactcgggctcgacgggcaggaggctccccacaaagatcttt
atggcgccttgtccctaccagaggctcaggcacatggtgtctggaaagatgcacagtagg
acccacggacccaccgacgctctcaccaggcagcccgtggcgggcaggtccagggagggg
ggtataaagatcggggagatggagcagtggtgcaaaatctctcacggggcctcagagtcc
ctgaaagagtctgtgtacgacacgagcgacaagtacgaggtcccggtgtgcaaagagtgc
ggcaggatctcggaccacttcgagtactgcaggatgtgcgacgcgacggacgtgtctttg
gtgaagctcccctacacgaccaagattctgtttcaggaactgaggtccatcgggatttcc
atagccttcaagtga
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