KEGG   Viruses: 12979101
Entry
12979101          CDS       T40000                                 
Symbol
SFVgp3
Name
(RefSeq) Semliki Forest virus; truncated structural polyprotein
  KO
K19288  Alphavirus structral polyprotein
Virus
11033  Semliki Forest virus
SSDB
Motif
Pfam: Alpha_E2_glycop Peptidase_S3 Alpha_E3_glycop Alpha_E1_glycop Trypsin_2
Other DBs
NCBI-GeneID: 12979101
NCBI-ProteinID: YP_006390078
RS: NC_003215
LinkDB
Position
NC_003215:join(7420..9831,9831..9911)
AA seq 830 aa
MNYIPTQTFYGRRWRPRPAARPWPLQATPVAPVVPDFQAQQMQQLISAVNALTMRQNAIA
PARPPKPKKKKTTKPKPKTQPKKINGKTQQQKKKDKQADKKKKKPGKRERMCMKIENDCI
FEVKHEGKVTGYACLVGDKVMKPAHVKGVIDNADLAKLAFKKSSKYDLECAQIPVHMRSD
ASKYTHEKPEGHYNWHHGAVQYSGGRFTIPTGAGKPGDSGRPIFDNKGRVVAIVLGGANE
GSRTALSVVTWNKDMVTRVTPEGSEEWSAPLITAMCVLANATFPCFQPPCVPCCYENNAE
ATLRMLEDNVDRPGYYDLLQAALTCRNGTRHRRSVSQHFNVYKATRPYIAYCADCGAGHS
CHSPVAIEAVRSEATDGMLKIQFSAQIGIDKSDNHDYTKIRYADGHAIENAVRSSLKVAT
SGDCFVHGTMGHFILAKCPPGEFLQVSIQDTRNAVRACRIQYHHDPQPVGREKFTIRPHY
GKEIPCTTYQQTTAETVEEIDMHMPPDTPDRTLLSQQSGNVKITVGGKKVKYNCTCGTGN
VGTTNSDMTINTCLIEQCHVSVTDHKKWQFNSPFVPRADEPARKGKVHIPFPLDNITCRV
PMAREPTVIHGKREVTLHLHPDHPTLFSYRTLGEDPQYHEEWVTAAVERTIPVPVDGMEY
HWGNNDPVRLWSQLTTEGKPHGWPHQIVQYYYGLYPAATVSAVVGMSLLALISIFASCYM
LVAARSKCLTPYALTPGAAVPWTLGILCCAPRAHAASVAETMAYLWDQNQALFWLEFAAP
VACILIITYCLRNVLCCCKSLSFLSATEPRGNRQSLRTFDSNAERGGVPV
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgaattacatccctacgcaaacgttttacggccgccggtggcgcccgcgcccggcggcc
cgtccttggccgttgcaggccactccggtggctcccgtcgtccccgacttccaggcccag
cagatgcagcaactcatcagcgccgtaaatgcgctgacaatgagacagaacgcaattgct
cctgctaggcctcccaaaccaaagaagaagaagacaaccaaaccaaagccgaaaacgcag
cccaagaagatcaacggaaaaacgcagcagcaaaagaagaaagacaagcaagccgacaag
aagaagaagaaacccggaaaaagagaaagaatgtgcatgaagattgaaaatgactgtatc
ttcgaagtcaaacacgaaggaaaggtcactgggtacgcctgcctggtgggcgacaaagtc
atgaaacctgcccacgtgaaaggagtcatcgacaacgcggacctggcaaagctagctttc
aagaaatcgagcaagtatgaccttgagtgtgcccagataccagttcacatgaggtcggat
gcctcaaagtacacgcatgagaagcccgagggacactataactggcaccacggggctgtt
cagtacagcggaggtaggttcactataccgacaggagcgggcaaaccgggagacagtggc
cggcccatctttgacaacaaggggagggtagtcgctatcgtcctgggcggggccaacgag
ggctcacgcacagcactgtcggtggtcacctggaacaaagatatggtgactagagtgacc
cccgaggggtccgaagagtggtccgccccgctgattactgccatgtgtgtccttgccaat
gctaccttcccgtgcttccagcccccgtgtgtaccttgctgctatgaaaacaacgcagag
gccacactacggatgctcgaggataacgtggataggccagggtactacgacctccttcag
gcagccttgacgtgccgaaacggaacaagacaccggcgcagcgtgtcgcaacacttcaac
gtgtataaggctacacgcccttacatcgcgtactgcgccgactgcggagcagggcactcg
tgtcatagccccgtagcaattgaagcggtcaggtccgaagctaccgacgggatgctgaag
attcagttctcggcacaaattggcatagataagagtgacaatcatgactacacgaagata
aggtacgcagacgggcacgccattgagaatgccgtccggtcatctttgaaggtagccacc
tccggagactgtttcgtccatggcacaatgggacatttcatactggcaaagtgcccaccg
ggtgaattcctgcaggtctcgatccaggacaccagaaacgcggtccgtgcctgcagaata
caatatcatcatgaccctcaaccggtgggtagagaaaaatttacaattagaccacactat
ggaaaagagatcccttgcaccacttatcaacagaccacagcggagaccgtggaggaaatc
gacatgcatatgccgccagatacgccggacaggacgttgctatcacagcaatctggcaat
gtaaagatcacagtcggaggaaagaaggtgaaatacaactgcacctgtggaaccggaaac
gttggcactactaattcggacatgacgatcaacacgtgtctaatagagcagtgccacgtc
tcagtgacggaccataagaaatggcagttcaactcacctttcgtcccgagagccgacgaa
ccggctagaaaaggcaaagtccatatcccattcccgttggacaacatcacatgcagagtt
ccaatggcgcgcgaaccaaccgtcatccacggcaaaagagaagtgacactgcaccttcac
ccagatcatcccacgctcttttcctaccgcacactgggtgaggacccgcagtatcacgag
gaatgggtgacagcggcggtggaacggaccatacccgtaccagtggacgggatggagtac
cactggggaaacaacgacccagtgaggctttggtctcaactcaccactgaagggaaaccg
cacggctggccgcatcagatcgtacagtactactatgggctttacccggccgctacagta
tccgcggtcgtcgggatgagcttactggcgttgatatcgatcttcgcgtcgtgctacatg
ctggttgcggcccgcagtaagtgcttgaccccttatgctttaacaccaggagctgcagtt
ccgtggacgctggggatactctgctgcgccccgcgggcgcacgcagctagtgtggcagag
actatggcctacttgtgggaccaaaaccaagcgttgttctggttggagtttgcggcccct
gttgcctgcatcctcatcatcacgtattgcctcagaaacgtgctgtgttgctgtaagagc
ctttcttttttaagtgctactgagcctcggggcaaccgccagagcttacgaacattcgac
agtaatgccgaacgtggtggggttcccgtataa

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