KEGG   Viruses: 13466414
Entry
13466414          CDS       T40000                                 
Symbol
RdRp, B923_sLgp1
Name
(RefSeq) Shamonda virus; RNA-dependent RNA polymerase
  KO
K25345  Peribunyaviridae RNA-directed RNA polymerase L [EC:2.7.7.48 3.1.-.-]
Virus
159150  Shamonda virus
SSDB
Motif
Pfam: Bunya_RdRp L_thumb_ring_vir L_protein_N
Other DBs
NCBI-GeneID: 13466414
NCBI-ProteinID: YP_006590076
RS: NC_018463
UniProt: J4FCT8
LinkDB
Position
NC_018463:20..6784
AA seq 2254 aa
METYKINIFRDRINQCRSAEEAKDIVADLLMARHDYFGREVCYYLDIEFRQDVPAYDILL
EFLPAGTAFNIRNCTPDNFIIHNGKLYVIDYKVSTDHAYGQKTYEKYTQIFGDALSELPF
DFEVVIIRADPLRDTIHVNSNQFLEIFGPLNINLDFTWFFNLRSLIYEKYKDDDRFLEIV
NQGEFTMTGPWIDEDTPELYSHPVFLEFYDSLDEMAKLTFHESMTFDATRGEKWNQNLQK
VINRYGNDYNVFVKDAAAGIFRCEGNYPKPNHDEITIGWNQMVQRVSTERNLTQDVSKQK
PSIHFIWGQPDEASNATTPKLIKIAKALQNISGESTYIGAFRALGMLMDFSENTALYEAH
TSKLKSMARQTSKRIDTKLEPIKIGTATIYWEQQFKLDTEIMNTKDKSHLLKDFLGIGGH
VQFSKKTIDDLDTDKPTILDFNKKEVIDFCKFQYENVKKILSEDNNLERIGCYLEEYGAN
IASCSKDTWNQINRIGKSNYWACIKDFSVLMKNMLAVSQYNRHNTFRVVCCANNNLFGFV
MPSSDIKAKRSTLVYFLAVLHSTPQNVMHHGALHATFKTGSKYLSISKGIRLDKERCQRI
VSSPGLFMLTTLMFTGDNPTLNLTDVMNFTFHTSLSITKAMLSLTEPSRYMIMNSLAISS
HVRDYIAEKFGPYTKTSFSVVMANLIKRGCYMAYNQRDKVDMRNICLTDYEITQKGVRDN
RDLSSIWFEGYVSLKEYINQIYLPFYFNSKGLHEKHHVMIDLAKTILDIERDQRLNIPGI
WSTTPRKQTANLNITIYAVAKNLIMDTARHNYIRSRIENTNNLNRSICTISTFTSSKSCI
KVGDFEKEKSSAIKKAADCMSKEIKKYTIANPEFVDEELMNATIRHSRYEDLKKAIPNYI
DIMSTKVFDSLYQKITRKEINDKPTVYHILSAMKNHTDFKFTFFNKGQKTAKDREIFVGE
FEAKMCLYLVERISKERCKLNPDEMISEPGDSKLKKLEELAESEIRFTAATMKQIKERYL
AEMGEASHMITYKPHSVKIEINADMSKWSAQDVLFKYFWLFALDPALYLQEKERILYFLC
NYMQKKLVLPDEMLCSILDQRIKHEDDIIYEMTNGLSQNWVNIKRNWLQGNLNYTSSYLH
SCSMNVYKDILKRAATLLEGEVLVNSMVHSDDNHTSIVMIQDKLDDDIIIEFSAKLFEKI
CLTFGNQANMKKTYITNFIKEFVSLFNIYGEPFSVYGRFILTSVGDCAFLGPYEDVASRL
SATQTAIKHGAPPSLAWTAIALTQWITHSTYNMLPGQINDPTSVLPSHDRFELPIELCGL
INSELPTIAIAGLEADNLSYLVRLSKRMSPIHLCREPIQHQYENIHTWDISRLTQCDIFR
LKLLRYMTLDSTMSSDDGMGETSEMRSRSLLTPRKFTTASSLSRLHSYADYQKTIQDQQK
VEELFEYFIANPQLLVTKGETCEEFCMSVLFRYNSRKFKESLSIQNPAQLFIEQVLFANK
PMIDYTSIHDRLFGIQDDPNINDTTCIIGKKTFVETYQQIKADVEKFTLDVEDIKTIYSF
CIMNDPILVACANNLLISIQGVEMQRLGMTCCYMPEIKSLKVIYHSPALVLRAYVTDNYE
QKGMEPDEMRRDIYHLEEFIEKTKLRANMQGRIANNEVKLMKRDLKFEVQELTKFYQICY
EYVKSTEHKIKIFILPKKAYTPIDFCSLVTGNLISDNKWMVVHYLKQITVPAKKAQIATS
IDLEIQIAYECFRLITHFADMFLNDDSKKAYINAIISTYTYKDVQVSNLYKKIKSSRLRS
KIIPLLYHLGDLQQVDVDRFDAEKAEEQITWNNWQTSREFTTGPIDLSIKGYGRSIRIIG
EDNKLTAAEMQLSRVRSDIVSRHGQALLNKPHGLKLEKMEPVTDLNPKLWYIAYQLREKK
RYHYGVFSTSYIEEHNSRIEASRIRKTNKWIPVCPIAISKQSSDGKPNLAKIPMLNIGEI
KFTKLQIAVDDHAMIRKAPFSKMVFFDGPPIQSGGIDIGKLMKNQNILNLRLDNIQSITL
LDLCRIFSCRGSKVDQDAFEFLSDEPLDEDVIDELDSSPALVVSYTKKSTKSNSFKNVIV
RALIRECDIFEDIMDITDDGFTSDSNLEVLENLTWILNMLATNQWSTELLACIHMCLYRN
EMDHIYHNFQVPEIFVDNPISLNVKWDEVVMFLNVLRDRDYKIEPWVSILDHSLTKAIEY
AYKKMDEERKQKSTGINKFLKGKKMGGRSKFDFQ
NT seq 6765 nt   +upstreamnt  +downstreamnt
atggagacatacaagatcaatatttttagagacaggatcaaccagtgtcgaagtgctgaa
gaagccaaagacattgttgctgatcttcttatggctagacatgactattttggtagagag
gtatgttattacctggatatcgagttccggcaggacgttccagcttatgacatacttctt
gaatttctgccagccggcactgcttttaacatccgcaattgtacgccagacaattttatc
attcataatggcaaactttatgtcattgattacaaggtatcaactgatcatgcatatggc
caaaaaacttatgaaaaatacacccaaatctttggagacgcattgtcagaattgccgttt
gattttgaggttgtgatcatccgtgctgaccctttgcgagatactattcatgtcaattca
aatcaattcttggaaatatttgggccgctcaacataaaccttgattttacttggttcttc
aacttacgatccctaatatatgaaaaatataaggatgatgacagattccttgaaattgtg
aatcaaggtgaattcacaatgactggaccctggatcgatgaggataccccggagctttat
tcgcaccctgtctttttagagttctatgattctttagatgagatggcaaagctgacattc
catgaatctatgacatttgatgcaactcgcggtgaaaagtggaatcaaaacctgcaaaaa
gttataaatagatatggcaatgattataacgtttttgtgaaagacgccgctgcaggaatc
tttagatgtgaagggaattatcctaaaccaaatcatgatgagattacaatcggttggaat
caaatggttcagagagtgagtactgagcgaaatctgactcaggatgtcagcaagcaaaag
ccatctatccatttcatatggggccaacctgatgaagcatcaaatgcaacaacaccaaaa
ctaatcaaaattgcaaaggcacttcaaaatatctctggtgagtctacatatataggcgca
ttcagagcactgggcatgcttatggacttttctgagaacacagccttatatgaagcacat
actagcaagttgaaaagtatggcaagacagacatcaaagagaattgatactaaactggag
ccaataaaaataggcactgcaacaatttattgggagcaacaatttaaattggatactgaa
ataatgaatacaaaagataaatcacatttgctaaaggacttccttggtatagggggtcat
gtgcaattctcaaaaaagaccattgacgatttagatactgacaaacctactattttggat
ttcaacaaaaaggaagtcattgatttctgcaaattccagtatgaaaatgtaaagaaaata
ttatctgaagataataatctagagcgtatagggtgttatttagaagaatatggtgcaaac
attgcatcatgctcaaaggatacatggaatcagataaatcgaatagggaagtcaaattat
tgggcttgtattaaagatttttcagtcttgatgaaaaatatgctagcagtctctcaatat
aataggcacaatacttttcgcgtagtgtgttgtgcgaacaataatctgtttgggtttgtg
atgccttcttctgatatcaaagcaaaacgatccacacttgtttatttcttagctgtattg
cattctacccctcagaatgtgatgcatcatggtgcattgcatgcaacatttaaaacaggt
tcaaaataccttagtatctctaagggaatacgattggataaagaaagatgtcagcgtata
gttagttcaccaggactttttatgttgactacattaatgtttacaggagacaatccaaca
ctcaatttgactgatgtcatgaattttacattccacacttccctgtctataactaaggct
atgctgtcacttacagaaccatcaaggtatatgataatgaattcattagccatatccagc
catgttagagattacatagcagaaaaatttggcccttatacaaagaccagtttctctgtg
gtaatggcaaacttgattaaaagaggatgttatatggcatataatcaaagagataaagtg
gacatgagaaatatctgcctaactgattatgaaataacccaaaaaggtgtgagggataac
agagatctatcatcgatctggtttgaaggctatgtatcattaaaggaatatattaaccag
atatatctgccgttttactttaattcaaaaggtttgcatgaaaagcatcatgttatgata
gatctggctaagacaattttagatatagaaagggatcagaggttaaatatcccaggaata
tggtctacaacacctagaaagcagactgcaaatttaaatataactatttatgcagttgca
aaaaatctaataatggacactgctagacataattatatcaggtcacggatagaaaacaca
aacaacttaaatagatcgatatgcactatttctacattcaccagctccaaatcatgtatt
aaggtaggagactttgagaaagaaaaaagctcagcaataaaaaaggctgcagattgtatg
tcaaaagaaataaagaagtataccattgcaaacccagaatttgttgatgaagaattaatg
aatgcaactataaggcattcacgctatgaagacttaaaaaaagcaatcccaaattatatt
gatattatgtcaaccaaagtatttgactctctataccagaaaataacaaggaaagagata
aatgataaacccactgtgtatcacatactctctgctatgaagaatcacacagattttaag
ttcacattctttaataaaggccaaaaaacagcaaaggatagggaaatattcgtaggcgaa
tttgaggcaaaaatgtgcttgtatctagtggaaaggatatctaaagaacgctgcaagttg
aacccagatgagatgatcagcgaaccaggcgattctaaattgaaaaaattggaagagctt
gcagaatctgaaatacgattcacagcagcaactatgaaacaaatcaaagaacgttactta
gcagaaatgggagaagcaagccatatgatcacatataaaccacattctgttaagattgaa
atcaatgcagacatgtcaaaatggagtgctcaggatgttttattcaaatatttctggttg
tttgcattggaccctgcactttatctgcaagaaaaagaaaggatattatacttcctgtgc
aattatatgcaaaaaaagctagttttgcctgatgaaatgctctgtagtatccttgaccag
cgtattaaacatgaggatgatataatatatgaaatgaccaatggcttatcacaaaattgg
gtcaatatcaaacgaaactggctgcaagggaatctcaattatacaagtagctacctgcat
tcatgttctatgaatgtttacaaggatattctaaagagggcagccactttactagaagga
gaggtcttagtcaattctatggtccattctgatgacaatcatacttcaatagtgatgatc
caggacaaattagatgatgacattattattgaattttctgcaaagctctttgaaaaaata
tgcctaactttcggaaaccaggcaaatatgaagaagacatacataacaaatttcataaaa
gaatttgtttcactcttcaatatttacggcgagccattttctgtttatggtcgctttatt
ttgacatctgttggcgattgtgcttttcttggaccatatgaagatgttgccagcaggtta
tctgcaacacagacagcaatcaaacatggagcaccgccatcgcttgcatggactgccatt
gcattaactcaatggataacacatagtacatataacatgctcccaggccaaatcaatgat
cctacttcagttttacctagtcatgataggtttgagctgcctatagaattatgtggcttg
ataaattcagaattgcccactatagctatagcaggtttggaagcagataatctaagttat
ttagttaggttatcgaaaagaatgtctcctatacatctttgccgtgaaccaatccagcat
caatatgagaatatacatacatgggatattagcaggctgacgcaatgtgatatattcaga
cttaagcttttaagatacatgacattagactcaaccatgtcatctgatgacgggatgggc
gaaactagcgagatgagatctaggtctcttttaacaccaaggaaattcactactgctagc
tcattgtctagattgcattcatatgctgattaccagaaaacaatacaagatcaacagaaa
gttgaagaattatttgaatattttatagccaatcctcaactattggtcacaaaaggtgag
acttgtgaagagttttgtatgtctgtattgttcaggtacaacagtcgcaagttcaaagaa
tcattgtctattcagaatccagctcagctcttcatagagcaagtgttgtttgcaaataaa
cctatgatagactatacaagcattcatgataggttatttggtatacaagatgacccaaat
ataaatgatactacatgtattattggcaagaagacttttgttgaaacatatcagcaaata
aaagctgatgtagaaaagtttacacttgatgtagaagacataaaaacaatttacagcttc
tgtataatgaatgaccctatattggttgcttgtgcaaacaacttgttaatttcaatacag
ggtgtagagatgcagcgattgggtatgacatgctgttatatgccagagattaaaagtctt
aaagtaatttatcatagtcctgctcttgtactgcgtgcttatgtaacagataactatgag
caaaaagggatggagccagatgaaatgcgcagagacatatatcatttagaagaatttata
gaaaagactaaattaagggcaaatatgcaagggagaattgcaaacaatgaggttaaatta
atgaagcgagatttgaaatttgaagtgcaggaactaactaaattctatcagatctgttat
gaatatgtgaaatcgacagaacacaaaattaaaatatttattcttccaaaaaaagcttac
actcccattgatttctgctcattggtgacaggcaatctaatatcagacaataaatggatg
gttgttcattatttaaaacaaataactgtcccagcaaagaaagcacaaatagccacatct
atagatctggagatacaaatagcctatgaatgtttcaggttaattacacactttgctgat
atgtttctgaatgatgattctaaaaaggcttatattaatgcgatcattagcacatacaca
tacaaggacgttcaagtatccaatctctacaagaaaatcaaaagttcaaggttacgctca
aaaatcataccattattatatcacttgggcgacttgcaacaagtggatgttgacagattt
gatgcagaaaaagcagaagagcagatcacgtggaataactggcaaacatcacgagaattt
actactggcccgattgatctatcaatcaaaggttatggacggtcaataaggatcataggt
gaagacaacaagcttacagctgcagaaatgcagttgtcaagagtgaggagtgacattgta
tcaaggcatggacaagccttgttgaacaaaccccacgggctgaaattagagaaaatggaa
ccagtgactgatctaaacccaaaattatggtatattgcataccaattacgcgagaaaaag
cggtatcactatggggtctttagtacatcttacatagaagagcacaactcaaggatagag
gcgtctcggatacgtaagaccaataaatggataccagtttgccctattgctatatcaaag
caatcgtctgatgggaagcctaatcttgcgaagatccctatgttgaatattggggagata
aaatttacaaaattgcagattgcagtagatgaccatgcaatgattaggaaggccccattc
agtaagatggttttctttgatggcccacctatacaaagtggtggcattgatattggaaag
cttatgaagaatcaaaatattctcaatctaagattagataatatacagagtataacgttg
ttagacttgtgccgtatattttcatgtcgaggatctaaagtggatcaagatgcatttgaa
tttttatctgatgaacctttagacgaagatgttattgatgaattagacagctcacctgca
ttagtagtatcttacacaaagaaatcaaccaagtccaatagttttaaaaatgttatagtt
agagcattgataagagaatgcgatatatttgaagatataatggatataacagacgatgga
tttacatctgatagtaatctagaagtactagaaaacttaacatggattttgaatatgctg
gcaacaaatcaatggtctacagaattattagcatgtatacacatgtgcttatatcgtaat
gagatggaccatatctatcataattttcaagttccagaaatatttgtggacaatccaatt
tcattaaatgtaaaatgggatgaagtagtcatgtttttaaatgtactgcgagacagggat
tataaaattgaaccatgggtatctatactagatcattccttaactaaggctatagaatat
gcttacaagaagatggatgaggagaggaagcaaaaatcaacaggcattaataaattctta
aagggtaaaaagatgggtggcagatcaaaatttgatttccaatag

DBGET integrated database retrieval system