Viruses: 1403415
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Entry
1403415 CDS
T40000
Symbol
CsVMVgp1
Name
(RefSeq) Cassava vein mosaic virus; coat protein/movement protein
KO
K27011
Cavemovirus coat protein / movement protein
Virus
38062
Cassava vein mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
MP
zf-CCHC
gag-asp_proteas
RVP_2
Motif
Other DBs
NCBI-GeneID:
1403415
NCBI-ProteinID:
NP_056846
RS:
NC_001648
UniProt:
Q66283
LinkDB
All DBs
Position
NC_001648:30..4148
Genome browser
AA seq
1372 aa
AA seq
DB search
MDSKDFTQLNLEEHSYKVNREKLPIDSYIQYGGFTYANFTPYIIHGDDGFGEHKQLNWTN
KLLWNKLGKLNIKDTQILMQNNISEEQHNELISLEAQKIARENLADRINYLQNINTSIDF
KLWKMNKENLERQELLLRQINELKEEIKSLKNIPSTVAIIPTNTYTINMIRTETEDWKYF
KYIEKELVQNKTEAIAKILDNSYIINDNLGLLYERYEEINPTPKPYKRPETIFDTPQYAK
YIRNQKRQEEYEKQQELKKENENKEYQEFLEWKEKQQKDKGKGIQTVYPTLIIPDIKPEK
QKKEDMMLEMIKNLQNELEQLKIQRHKEHEKQAELTKIQMLEEELEEELDPDNLEKEVLN
NIQNIQISSDISESSEINEISDNETEQISGSDSDYNNEQINVKIEGEEYEYKDNYRYYKP
QPPYYKKDIRRERQYKGQSSQRADYIKNRREQFESTYQANMNTTINDSGEILNLDCTTPE
EAEDRIQKWTQSMSIALVKQQLSNEQAKQFIRRTFIGNVKEWYKNLTNEAKQKLEGNAPL
LSLTHMELGLRAEFGKLGIESDVEKHEKKTSIARHKILQLQICSMDHQNLNAYLCEFQEY
YYSANYTEAESENILNMFYSKLPEPWGQQVLNGYLSEIKGKNLLDSIGARMTYLQEFISD
KCKENWTQKQARKIQLSKNLDCSYYEVGKYGCKQIRPHKRKRYYKKYIPIKRKYFNKKRY
KKYYRPKKFLKRKNPHKACKCYNCGEEGHISPNCKKPKKKTRINNLEALEFKNTEMENLE
FETNKNDIIWVEEIEVIQPLHYEEEEKYKGNYSDRILQNPYYINSISIEELDNLDWEFEY
QEDIEDDLEYQNFVYQESNDNWYSDQENWYSDEQYLGIYMFIGETSGENNQDNMEGIIKE
YNKTEPEKINKIIFTSEKFKQIMENDLNMTKDKIFHNNKLKKLFGKKEIEYYIVTDIEHP
IDVKYVQNQDKIINLPLYNQEIFENEIQKIPDKDQNKIRNIHLAAVEIVVKAYFREGIDT
PFEIILCDDRITYPQEGSLVEVLIGNLIYQKVKFTKIINYSISIEDKNLDKSLVMYWNLE
GIKMIKDSKIFSIRLRNLYVLSNKHIVKNKKQYNGNIIIEPIFQDVIQNNNRNYIEYGKP
GKFDRTKLKSYSRRFNEPLRLDDRTNIQREKDQIEKADHNLELQKELNNLNYYSQQGQSS
NVLDIPKILKIENTKNNYKQFHIIGKITEGRLNKFYPILIDTGAADSYISSKILEDEKLV
SNKLSKVVTSYNADNEKHIYDRNTEVIIELIDKNNEKYKINFIGLVDQLRLLEGGKAEIL
LGMNILQNLKPYCITDDYLEINLGFRCIKINRIKKDIFEIREDLQQMNVLNE
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggatagtaaagattttacacaacttaatctagaagaacatagttataaagttaataga
gaaaaattacctatagactcatatattcagtatggaggatttacttatgcaaattttaca
ccatatattatacatggagatgatggatttggagaacataaacaactgaattggactaat
aaattattatggaataaattaggtaaattaaatatcaaagatacacaaattctaatgcag
aataatattagtgaagaacaacataatgaattaataagcttagaagcacaaaaaatagct
agagaaaatttagctgatagaattaattatttacaaaatattaatacttcaatagatttt
aagttatggaaaatgaataaagaaaatttagaaaggcaagaattattattaagacaaata
aatgaattaaaagaagaaataaaatcattaaaaaatataccaagtacagtagcaataata
ccaactaatacttatactattaatatgattaggacagaaacagaagattggaaatatttt
aaatatattgaaaaagaattagttcagaataaaactgaagcaatagcaaaaatattagat
aatagttatataataaatgataatttaggattattatatgaaagatatgaagaaattaat
cccacacctaaaccatataaaagaccagaaactatatttgatacacctcaatatgcaaaa
tatattaggaatcaaaaaagacaagaagagtatgaaaaacaacaagaattaaaaaaggaa
aatgaaaataaagaataccaagaatttttagaatggaaagaaaaacaacaaaaagataaa
ggtaaaggaatacaaactgtatacccgacattaataataccagatataaaacctgaaaaa
caaaagaaagaagatatgatgttagaaatgattaaaaatttacaaaatgaattagaacaa
ttaaaaattcaaagacataaagaacacgaaaaacaagcagagttaactaaaatacagatg
ttagaagaggaattagaagaagaattagatcctgataatctagaaaaagaagttttaaat
aacattcaaaatatacaaatcagtagtgatataagtgaatcatcagagataaatgaaatt
tcagataacgaaacagaacaaatttcaggaagtgatagtgattataataatgaacaaatt
aatgttaagatagaaggagaagaatatgaatacaaagacaattatagatattataaacca
caaccaccatattacaaaaaagatataagaagagaaaggcaatataaaggtcaaagttca
caaagagcagattacataaaaaacagaagagaacaatttgaatctacatatcaagcaaat
atgaatacaaccataaacgatagtggagaaattcttaatttagattgcacaacaccagag
gaagcagaagatagaatacaaaaatggactcaatctatgtcaatagcattagttaaacaa
caattatctaatgaacaagcaaaacaattcataagaagaacttttataggaaatgtaaaa
gaatggtataaaaatttaacaaatgaagctaaacaaaaattagaagggaatgcaccatta
ctaagtttaactcatatggaattaggacttagagcagaatttggaaaattaggaatagaa
tcagatgtagaaaaacatgaaaagaaaacatctattgcaagacataaaatattacaatta
caaatatgtagtatggatcatcaaaacttaaatgcatatttatgtgaatttcaagaatat
tattatagtgcaaattatacagaagcagaatcagaaaatatattaaatatgttttatagt
aaactcccagaaccatggggacaacaagtattaaatggatatttatcagaaataaaaggt
aaaaatttactagatagtattggagctcgaatgacatatttacaagaatttatatcagat
aaatgtaaagaaaactggacacaaaaacaagctagaaaaatacaattatcaaagaatcta
gattgtagctattatgaagtaggaaaatatggatgtaaacaaataagacctcataagaga
aaaagatattataaaaaatatattcctataaaaaggaaatattttaataagaaaagatac
aaaaaatattatagacctaaaaaattcttaaaaaggaaaaatccgcataaagcatgtaaa
tgttataattgtggagaagaaggacacataagtccaaattgtaaaaaaccaaaaaagaaa
actagaattaataatttagaagctttagaatttaaaaatactgagatggagaatctagaa
tttgaaacaaataaaaatgatataatatgggtagaagaaatagaagttatacaaccttta
cattatgaagaagaagaaaaatacaaaggaaattactcagatagaatattacaaaatcct
tattatataaattcaataagtattgaagaattagataatttagattgggaatttgaatat
caagaagatattgaagatgatttagaataccaaaattttgtatatcaagaatcaaatgat
aattggtatagtgatcaagaaaattggtatagtgatgaacaatatttaggaatatatatg
tttataggagaaacatcaggagaaaataatcaagacaatatggaaggaataataaaagaa
tataataaaacagaaccagaaaaaataaataaaataatatttacctcagaaaaatttaaa
caaattatggaaaatgatttaaatatgacgaaagataaaatatttcataataataaactt
aaaaaattatttggaaagaaagaaatagaatactatatagttacagatatcgaacatcct
attgatgtaaaatatgtacaaaatcaagataaaataataaacctaccattatataatcaa
gaaatttttgaaaatgaaatacaaaaaatacctgacaaggatcaaaataaaataagaaat
atacatttagcagcagtagaaattgtagtaaaagcatattttagagaaggaatagacaca
ccatttgaaattatattatgcgatgatagaataacatatccacaagagggaagtttagta
gaagttttaataggaaatttaatatatcagaaagtaaaatttacaaaaataattaattat
tctataagcatagaagataaaaatttagataaaagtttagtaatgtattggaacttagaa
ggaattaaaatgataaaagatagcaaaatatttagtataagattaagaaatctttatgtt
ttaagtaataaacatatagtgaaaaataaaaaacaatataatggaaatataattattgaa
cctatatttcaagatgtaatacaaaataataatagaaattatatagaatatggtaaacca
ggaaaatttgatagaacaaaattaaaatcatatagtagaagatttaatgaaccgttaaga
cttgatgatagaacaaatatccagagagaaaaggaccaaatcgaaaaggcagaccataat
ttagaattacaaaaagaactaaataatttaaattattattctcaacaaggacaaagttct
aatgttttagatataccaaaaatattaaagatagagaacactaagaataattataagcaa
tttcatattattggaaaaattactgaaggaagattaaataaattttatccgatattaata
gatacaggagcagcagattcatatataagttcaaagatcttagaagatgagaaattagtt
tcaaataaattatctaaagtagttacatcatataacgcagataatgaaaaacatatttat
gacagaaacacagaagtaataattgaattaatagataaaaataatgaaaaatataaaatc
aattttatcggattagtagatcaattaagacttttagaaggaggaaaagctgaaatatta
ttaggaatgaacatattacaaaatttaaaaccctattgtataacagatgattacctagaa
attaatttaggctttagatgtataaaaattaatagaataaagaaagatattttcgaaatt
agagaagatttacaacaaatgaatgtccttaatgaatag
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integrated database retrieval system
