Viruses: 1446385
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Entry
1446385 CDS
T40000
Symbol
OBDVgp1
Name
(RefSeq) Oat blue dwarf virus; replicase-associated polyprotein
Virus
56879
Oat blue dwarf virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
Tymo_coat
Peptidase_C21
Salyut
RdRP_2
Motif
Other DBs
NCBI-GeneID:
1446385
NCBI-ProteinID:
NP_044447
RS:
NC_001793
UniProt:
P89920
LinkDB
All DBs
Position
NC_001793:115..6315
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AA seq
2066 aa
AA seq
DB search
MTTYAFHPLLPTPTSFATITGGGLKDVIETLSSTIHRDTIAAPLMETLASPYRDSLRDFP
WAVPASALPFLQECGITVAGHGFKAHPHPVHKTIETHLLHKVWPHYAQVPSSVLFMKPSK
FAKLQRGNANFSALHNYRLTAKDTPRYPNTSTSLPDTETAFMHDALMYYTPAQIVDLFLS
CPKLEKLYASLVVPPESSFTSISLHPDLYRFRFDGDRLIYELEGNPAHNYTQPRSALDWL
RTTTIRGPGVSLTVSRLDSWGPCHSLLIQRGIPPMHAEHDSISFRGPRAVAIPEPSSLHQ
DLRHRLVPEDVYNALFLYVRAVRTLRVTDPAGFVRTQCSKPEYAWVTSSAWDNLAHFALL
TAPHRPRTSFYLFSSTFQRLEHWVRHHTFLLAGLTTAFALPPSAWLANLVARASASHIQG
LALARRWLITPPHLFRPPPPPSFALLLQRNSTGPVLLRGSRLEFEAFPSLAPQLARRFPF
LARLLPQKPIDPWVVASLAVAVAIPAASLAVRWFFGPDTPQAMHDRYHTMFHPREWRLTL
PRGPISCGRSSFSPLPHPPSPTPAPDSRAEPLQPPSAPPSTHEPAPADLEPQAPPAHAPQ
TEPPSPVIEQEARPNPLPAPAPLSAPTPSASAPSLAPTPSAPEPPSPTASEQAASLIPAP
SSALVVEPSGVVSASSWGATNQPADQVDDSPLARDPSASGPVRFYRDLFPANYAGDSGTF
DFRARASGRSPTPYPAMDCLLVATEQATRISREALWDCLTATCPDSFLDPKSIAQHGLST
DHFVILAHRFSLCANFHSAEHVIQLGMADATSIFMINHTAGSAGLPGHFSLRLGDQPRAL
NGGLAQDLAVAALRFNISGDLLPTRSVHTYRSWPKRAKNLVSNMKNGFDGVMASINPIRP
SDAREKIVALDGLLDIARPRSVRLIHIAGFPGCGKTHPITKLLHTAAFRDFKLAVPTTEL
RSEWKELMKLSPSQAWRFGTWESSLLKSARILVIDEIYKLPRGYLDLAIHSDSSIEFVIA
LGDPLQGEYHSTHPSSSNSRLIPEVSHLAPYLDYYCLWSYRVPQDVAAFFQVQSHNPALG
FARLSKQFPTTGRVLTNSQNSMLTMTQCGYSAVTIASSQGSTYSGATHIHLDRNSSLLSP
SNSLVALTRSRTGVFFSGDPALLNGGPNSNLMFSAFFQGKSRHIRAWFPTLFPTATLLFS
PLRQRHNRLTGALAPAQPSHLLLPDLPSLPPLPASGPYSRSFPVRSRFAAAVKPSDRSDV
LSWAPIAVGDGETNAPRIDTSFLPETRRPLHFDLPSFRPQAPPPPSDPAPSGTAFEPVYP
GETFENLVAHFLPAHDPTDREIHWRRQLSNQFPHVDKEYHLAAQPMTLLAPIHDSKHDPT
LLAASIQKRLRFRPSASPYRISPRDELLGQLLYESLCRAYHRSPTTTHPFDEALFVECID
LNEFAQLTSKTQAVIMGNARRSDPDWRWSAVRIFSKTQHKVNEGSIFGAWKACQTLALMH
DAVVLLLGPVKKYQRVFDARDRPAHLYIHAGQTPSSMSLWCQTHLTPAVKLANDYTAFDQ
SQHGEAVVLERKKMERLSIPDHLISLHVHLKTHVETQFGPLTCMRLTGEPGTYDDNTDYN
LAVINLEYAAAHVPTMVSGDDSLLDFEPPRRPEWVAIEPLLALRFKKERGLYATFCGYYA
SRVGCVRSPIALFAKLAIAVDDSSISDKLAAYLMEFAVGHSLGDSLWSALPLSAVPFQSA
CFDFFCRRAPRDLKLALHLGEVPETIIQRLSHLSWLSHAVYSLLPSRLRLAILHSSRQHR
SLPEDPAVSSLQGELLQTFHAPMPSLPSLPLFGGLSPDNILTPHEFRTALYESSAYPTPP
NSPTSMSGIHASQVGPPPASDDRTDRQPSLPLAPRIVESSLAVPHVDVPFQWAVASYAGD
SAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFAKPISVTAVWTIASIAPAT
TTELQYYGGRLLTLGGPVLMGSVTRIPADLTRLNPVIKTAVGFTDCPRFTYSVYANGGSA
NTPLITVMVRGVIRLSGPSGNTVTAT
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatacgccttccacccgctgctccccaccccgacctccttcgccactatcact
gggggtggtttgaaggatgttatcgaaaccctctcgtccaccatccacagagacacgatc
gcagcacccctcatggagaccctcgcctcgccttaccgagactcccttcgcgacttccct
tgggccgtccccgcctccgccctgcccttcctccaggaatgtggcatcacggtcgccggc
cacggtttcaaagctcatccccaccctgtccacaaaaccatcgagacccacctcctccac
aaggtttggcctcactatgcccaagtcccttcttccgtcctcttcatgaagccctcgaag
ttcgccaaactccagcggggcaacgccaacttctccgcactccacaactatcgcctcacc
gccaaagacaccccgcggtatcctaacacttcaacctctctccccgacaccgagaccgcc
ttcatgcatgacgccctcatgtattacacccccgctcaaattgttgacctgttcctttcc
tgcccgaagctcgagaaactgtacgcctcccttgtcgtcccccccgagtcctccttcacc
tctatctctctccatccagatctttaccgctttcgctttgacggggaccgtttgatttat
gagttggagggcaaccccgcccacaactacacccaacctcgatccgccctcgactggctc
cgcacaaccaccatccgcggaccaggcgtttctctcaccgtgtccaggctcgactcgtgg
ggtccctgccattccctcctcatccagcgcggcattccccccatgcacgccgagcacgac
tccatctcgttcaggggtccacgcgccgtcgccattcccgagccctcctccctccaccag
gatctgcgccaccgtctcgttccagaggacgtgtataacgccctcttcctctacgtccgc
gctgtccgcacgctccgcgtaaccgatcccgccggctttgtccgcacccagtgctctaag
cccgagtacgcttgggtcacttcctccgcttgggacaacttggcccacttcgccctcctc
accgctccacaccggccccgcacctcgttctacctattctcctctaccttccagcgcctt
gagcactgggtccgccatcacaccttcctcctcgccggcctcaccacagcctttgctctc
ccgccgtctgcctggctcgcgaacctcgtcgcccgcgcctccgcttcacacatccaaggc
ctcgcgctagcccgccggtggctcatcactccccctcatctcttccgcccccctccaccc
ccaagcttcgctcttcttctccagcgcaactccaccggcccggtccttctccgtggctcc
cgcctcgagtttgaggccttcccttctctcgccccacaactcgcccgtcgctttccattc
ctcgctcgccttctcccccagaaacccatcgacccctgggtcgtcgcgagcctcgctgtc
gccgttgctatacccgccgcctccctcgccgttcgctggttcttcggccccgacaccccc
caagccatgcacgaccgataccacaccatgttccaccccagagagtggcgcctcaccctg
cccaggggccccatctcatgtggccgctccagcttctccccccttccccacccaccttcg
cccactcccgctcccgactcccgagctgaacccctccagccaccctccgctccaccctcg
acccacgagccggctcccgccgatctcgagccccaagctcctccggcccacgccccccag
accgagcctccgagtcccgtgatcgagcaagaagcgcgtccgaatccccttcccgctcct
gccccgctttctgctcccaccccctccgcttccgcgccttcacttgccccaacaccctcg
gcccccgagcctccctcgccgaccgcttccgagcaggccgcgtccctcatccctgctccc
tcttccgccctcgtcgtggagccatccggcgtcgtctctgcctcatcttggggcgccacc
aaccagccggccgatcaagtcgatgactcccctctcgctcgcgatcccagcgcctccggc
cccgtccgcttctatcgagacctcttccccgccaactacgcgggtgattccggcaccttc
gacttccgcgcccgcgcctcaggccgctctcccaccccataccccgccatggattgcctc
ctcgtcgccaccgagcaagccacccgcatctctcgagaggccctctgggactgcctcaca
gccacctgccccgactcattcctcgaccccaagagcatcgcccagcatggcctcagcacc
gatcacttcgtcatcctcgctcatcgcttttccctatgtgccaacttccactccgccgag
cacgtcattcagctcgggatggccgatgccacctccattttcatgatcaaccacacggct
ggctccgcgggcctcccgggccacttctccctccgcctgggtgaccagccccgtgccctc
aacggtggcctcgctcaggacctcgccgtcgccgccctccgattcaacatctccggtgat
ctcctcccaacccgatccgttcacacttacaggtcttggccaaagcgcgccaagaacctt
gtgtccaacatgaagaacggctttgacggagtcatggccagcatcaacccgatccgaccc
agcgatgctcgcgagaagatcgtcgccctcgacggtctcctagacattgcccgaccccga
tccgtccgcctcatccacattgctggtttcccaggctgcggaaaaacacatccgatcacc
aagctcctccacaccgccgccttccgcgacttcaaactcgccgtcccgaccaccgagctc
cggtctgagtggaaagagctcatgaagctctcaccctctcaggcctggcgcttcggcacc
tgggagtcctcccttctcaagagcgccaggatcctcgtgatcgatgagatctacaagttg
ccccgagggtacctcgacctagccatccactccgactcgtccatcgagtttgttatcgcc
ctgggagatcctctgcaaggcgagtatcactccactcatcccagctcctccaactctcgc
ctcattcccgaagtcagccatctcgctccctacctcgactactactgcctctggagttac
cgcgtcccccaagacgtcgccgctttcttccaggttcagagccacaaccctgctctcggg
tttgcccgtctctcgaagcagtttcccacgaccgggcgcgtcctcaccaactcacagaac
tcgatgcttaccatgacgcagtgcggctactctgccgtcaccattgcctcaagccagggt
tccacctacagcggcgccacgcacatccaccttgaccgcaactcatcgctcctctcccct
tcgaactccctcgtcgccctcactcgctcgagaaccggcgtgttcttctccggggaccct
gctcttctcaacggtggtcccaactccaacctcatgttctctgccttctttcagggcaag
tctcgccacattcgcgcctggttccccacccttttccctacggccactctcctcttctcc
cccctccgccaacgccacaaccgcctcactggcgccctcgctcccgcccaaccttcccac
ctcctgctccctgaccttccgagcctccctcctctccccgcctccggtccctactcccgc
tcattcccagttcgatctcgcttcgccgcggccgtcaagccttccgaccggtcagacgtc
ctctcgtgggcccctatcgccgtcggtgacggggaaaccaacgcccctcgcattgacacc
tccttcctgcccgaaactcgccgcccgcttcattttgatcttccctcgttccgcccccaa
gccccaccgcctccctctgacccagccccttctgggaccgcctttgagcccgtttacccc
ggcgaaaccttcgaaaatttggtcgcccacttccttccggctcacgaccccactgaccgc
gaaatccactggcgtcggcagctttccaaccagtttccccatgtcgataaggagtaccac
ctcgcggctcagccaatgacgctcctcgctcccatccacgactccaagcacgaccccacc
ctccttgccgcctccatccagaaacgacttcgatttcgaccctccgcctctccctaccga
atctcccctcgtgacgagctgcttggccagctcctctacgagagtctctgccgcgcgtat
catcgttccccaaccaccacccaccctttcgatgaggccctcttcgtcgagtgtatcgac
ctgaacgaattcgctcaactcaccagcaaaactcaggccgtcatcatgggcaacgcccgc
cgctctgacccagactggcgctggtccgccgtccggatcttcagcaaaacccagcacaag
gtcaacgaaggttcgatctttggagcctggaaagcttgccagaccctcgctctcatgcac
gacgccgtcgttctgctccttggccccgtcaagaagtatcaacgcgtcttcgatgctcga
gaccgccccgcccacctctacatccacgccggccagacgccctcttccatgagcctgtgg
tgccagacccacctcacccccgctgtcaagctcgcgaacgactacaccgctttcgaccag
tctcagcatggcgaggccgtcgtcctcgagagaaagaagatggaacgcctttccatcccg
gatcacctcatctccctccacgttcaccttaagacccatgtcgaaacccagtttggccct
ctcacctgcatgcgcctaaccggcgagcctggcacctacgacgacaacactgactataac
ctcgccgtcatcaacctcgagtacgcggctgcccacgtcccgaccatggtctcgggcgac
gattcactccttgacttcgagcccccacgccgcccagagtgggtcgccatcgaacctctt
ttagccctccgcttcaagaaggagcgcggtctgtatgccaccttctgcggctactacgcc
tcgcgagttggctgcgtccgatctcccatcgccctcttcgctaagctcgccatcgccgtc
gacgactcatccatctccgacaagctcgccgcatacctcatggagttcgcggtcggtcac
tctctcggcgactctctttggtccgccctccccctgtccgccgtcccctttcagtcagcc
tgtttcgatttcttctgccgccgcgctccccgcgatctaaagctcgcccttcacctgggc
gaagtccctgaaaccatcatccaacgcctctcccacctctcctggctatcccacgccgtc
tacagcctcctcccatctcgccttcgcctcgccatccttcacagctcacgccagcaccgt
tccctccccgaagacccagccgtttcttcgcttcagggtgaattgcttcagacgttccat
gctccaatgccctctctcccttcactcccactcttcggcggtctatctcccgacaacatc
ctcactccccacgagttccgcaccgccctctacgaaagctccgcctaccctactcctccc
aactctccgacctccatgtcaggaatccatgcctcgcaagttggtccgccccccgccagc
gatgatcgcactgaccgccagccttctcttcctcttgctcctcgtattgtggagagctct
ctcgccgtgccgcacgtcgacgtcccgttccaatgggccgtcgcgtcgtacgccggagac
tccgccaagttcctcaccgacgacctctcaggatcctctcacctgagccgcctcaccatc
ggctatcgccacgccgagctcatctccgccgagctcgagttcgccccccttgccgccgcc
ttcgccaagcccatctccgtcaccgccgtctggaccatagcctccatcgccccagccacc
accaccgagctccagtactacggtggccgactcctcaccctcggaggccccgtcctcatg
ggctccgtcacccgcatcccagccgacctcacccgcctcaaccccgtcatcaagaccgcc
gtgggcttcactgactgcccccgcttcacctactccgtctatgccaacggcgggtccgcc
aacactcctctcatcaccgtcatggtgcgaggagttatccgcctctccggcccttcgggc
aacaccgtcaccgccacctaa
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