Viruses: 1449670
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Entry
1449670 CDS
T40000
Symbol
Jinrvgp6
Name
(RefSeq) Japanese iris necrotic ring virus; capsid protein (p38)
KO
K27053
Tombusviridae capsid protein
Virus
77344
Japanese iris necrotic ring virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Viral_coat
Capsid-VNN
Ig_ZP2
Motif
Other DBs
NCBI-GeneID:
1449670
NCBI-ProteinID:
NP_038458
RS:
NC_002187
UniProt:
Q9IR97
LinkDB
All DBs
Position
NC_002187:2685..3743
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AA seq
352 aa
AA seq
DB search
MALRDEKKVAKLASDGVAWAVKLRSGGGWKTLTTTQKRMARQALGMTQVPIAQTGLRVNR
VSQPISVSSRITTGEPRVTNVKRSMTVTFSEMIGVVRSHSSLSTESWVLNPSDIATFPQL
SVSAAMYEKYRFTNLAFRFAPSCPTTTGGVVVLVHDPDSSDDLPSDPTMLYEYSGAMRTS
AYSPARLIVPTDGAARFVGDNHTSDPKLINFGKLIVANYGQGASDPDMLGEIFIEYTVVL
IDRQPSALSTQTLSAESSTGPKLLSRLVEGTKSPYTLTYSFNCGGTFVVSLFYPIGPVSG
PVSGSATIIRAYGDAQSQQAQVITVRSPCRGGDFTLGLNSPGDIPTAFVTRA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcgctacgtgatgaaaagaaagttgcgaagctagcctctgatggagtagcctgggct
gtcaagctcagatctggtgggggttggaaaaccctcaccactacccaaaagaggatggct
agacaagcgctgggaatgactcaagtgcccatagcccaaactgggttgcgggtaaatcgt
gtgtcccagccaatctctgtgtcctctaggatcacgactggtgaaccccgtgtaaccaac
gttaaacgcagtatgactgtcactttttccgagatgattggtgtagtaaggtcacactcc
agcttgtccacggagtcttgggtcctcaacccaagtgacattgctacgttccctcaatta
tccgtttctgctgcgatgtacgagaagtacaggttcaccaatctagccttcagatttgct
ccaagttgccctacgaccacaggtggagtagtagtattagtccacgaccctgattcgagc
gacgacctccctagcgaccctaccatgttatatgagtattcaggagctatgcgaaccagt
gcttacagcccagctcgcctcattgttccaactgacggcgcagccaggtttgtcggcgac
aatcacacaagtgacccgaagctgatcaacttcgggaagctcattgttgccaattatgga
caaggagcatctgatcctgatatgttgggggagatctttatcgagtatactgttgtgctt
attgatcggcagccatctgcattgagtacacagacattatcggctgaatcatcgacagga
cctaagctactctcccggttggtcgagggaaccaagagcccctacacccttacgtacagc
ttcaactgtggtggtacctttgttgtcagtttgttctaccccatcggaccagtttccgga
ccagtatccgggtcagctactattatccgagcctatggggacgcacagagccaacaggca
caagttatcaccgttaggtcaccatgcagaggcggagacttcacccttggactgaatagt
ccaggtgacatacccaccgcctttgtcacccgtgcttag
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