Viruses: 1457726
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Entry
1457726 CDS
T40000
Symbol
L, NCMVgp9
Name
(RefSeq) Cytorhabdovirus gramineae; polymerase
KO
K26704
Rhabdoviridae RNA-directed RNA polymerase
Virus
1985704
Cytorhabdovirus gramineae
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Mononeg_RNA_pol
Mononeg_mRNAcap
Motif
Other DBs
NCBI-GeneID:
1457726
NCBI-ProteinID:
NP_597914
RS:
NC_002251
LinkDB
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Position
NC_002251:6740..12916
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AA seq
2058 aa
AA seq
DB search
MEDDIFDGFRTFMRGLGDYHLRSAITPVRVNEMKEKIGRKRELKAFNRILSAFPNIIAGD
PSLLLAKIFRRIKKEEPREIPMLDETLRLLKAEFKHMGILSVKGDPIDRLINMLDNRAII
KSKHTQLKIKFQRLIMCANAINSLREHKIFGLDEDESTGQPCLRLGQMVIIIWGEFIAVR
SKRVIDSIYSLDVLRMIVDKLTERDNVLMATYIGRKIFPDVYPSVSLIQRVFNVFDRWLL
ASGNSGYTLLKTYEALVTGVILKKETSQYIRSEEFLSNTLSGLEANERDVATELIQLLSA
DDVTPHHLTQVMGLFRLWGHPEVDALKGLEKVQKIGTATKFISEYSSLLACRKFKEIFYM
EYFKKNRKYPECIVSEECWFYENVVTGAVINTKDPRYHLSDWDLVESKETFSIPTTFNLS
MIVSDTAISPSREEIKKCSDEGRAAMDPSIRRGVLKWMKDGLINCDGLLRGIDKKMNGLD
IEERVIGLYPKEREMNPVARMFALMTLKMRSYVVITENMLSENILPYIPGITMTYNMLDL
AKEMIRATRSQGKQGEFSRTFCINMDFEKWNLNMRKEGTYYVFQELGRLFGLPTLYNKTY
DIFRNSTIYLADGSYNPKFDSDLQWVDDKSGKSYEGHIRGFEGLRQKGWTVFTVVLIAYV
CDSLGISFRLMGQGDNQVLMVTIHSKNARLSGIDSQASINEISDKIKSLISRLQEVFNGV
GLPLKPLETWVSDIYFSYGKMPIYKGVPLCSSLKRISRIFYFSNEDLMTVDNALGAVTAN
SQAAVMADIHPAVPYFIAKWQHLQCLSVFSRYHPLVGEKMDWDIDSYRFTLRMKDGTIWD
DEQPNGFSREIRLMAMASIPKTLGGFNIVTYFDMILRGYSDPPMKDYQWLLILTKGSTGA
LKTALKNWYRVVLSPSIDYLHLIQDPTSLNLLCPPNSKTLIKRLISETITSLDTQSEFAG
WFQELMEISAEKKMGTLVEKLTSKDEVNVRLCHDILGATLYGYSESISSKVDKTVTLSRM
TVTSKDVVSKLAIGEKKTWNYFLWRTNYDQGEEVVSLCPSEQIRHLRKKGWKKDVVGIST
PYPHHFLGGEDETDRPDSYVEVVVNDVVLSHPDRLILTTGSSLPYLGSVTKEKLHSTSAR
AAYGTEPLITRPIKLLRAIGWFIDEESNWAESIRNLLKAVTDLDPGKVISIPEHVKGSMM
HRYLDMALAHGSLWMPSFGPASHLSMSTNTLLEYAKGSKNVTLQFQAMLGLIQFCTINRL
LSSEPRKIVRVYRTCPHCIKPVDEPKEDLPTPLTEEDIPSRPDNPYLYVEQEKIALVHKR
ELDNYESLPIIHRSYLLTYPHIGRRLLTEILATRVATSILYNSQEAESGMTDIAGLSRTI
FLKLDIYTTFLTAIKMIWIGISSTPRVMSGEVFPSWSFLKKSIIRRIWESPPSSFSILAG
FYLWEETVRELSDLPWAVMPLSYPATPTSIGIAAKNSLIRLAQKTTEIKINSSWIVSPLV
KVDPGILLKSNLLFWRGGFKAQCSDCIQAGMSCRIRSYYAWDDLSRIRCNQGHSVFTLKA
WRMLKKIVMDIETIGDTIPSVPRKQYSPEVSRLSLTRSEGTSQILVKSSEIQGYSEFPHQ
VPGNEYLERPDLNVQLRYSYSIPTKALYRIHEGLSALESLRDYGAILVLGDGFGYSSVMC
KFMCKNSRVYSWTLIDASPGVQHCLRLSKPPTHYSSHLKIDITSTIDLLSDVSNPNFPKT
LSTFCHDKQIDLIISEVELLYSGAIMSPSQIVMMYYQSGTTRILHKFDFKEFSEIAELIQ
CMRHCFSDWVIFQTPSVGFHSGELWVYMSEPRQTIINHKYLSYNATIAIYDKMRFAHENM
GRFHPGEYLDHVNQYLDNTYLASFREQLLDTWFQDATIMYWKEQDFSQLYYSLRTGKRPS
FVYDTQGNTVYYLHADMTEKLFERLMTLALSQLEDLQNQLPVILSRNWKLKWERSQEKVG
VRSSYKWAPALSTEGHTPIPHRVKTSILSHLPGVMAIREGKNKYTVIGNKIRFTHCSQSP
RELKFAISRMATFSSPYA
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgatatatttgatggcttccgaaccttcatgcgaggtttgggagattatcat
ttaagatcagcgatcactccagttcgtgtgaatgaaatgaaagagaagatagggcgaaag
agagaactgaaggcattcaatagaatcctatctgcgttccctaatattattgctggagat
ccctccttactcttggctaagatctttagaagaatcaagaaggaggaaccaagggaaata
cctatgcttgatgaaacactacgtctccttaaagcagagttcaaacacatggggatctta
tccgtcaagggggatccgatagaccgattaattaacatgttagacaaccgagcaatcatc
aagtccaagcacacccagttaaaaatcaaattccagagattgataatgtgcgcgaatgca
atcaattctctacgtgagcataagatattcggtctagatgaagatgagagcacgggtcaa
ccatgtctccggttggggcaaatggtaatcatcatatggggtgagttcatagctgtaagg
tcaaaaagagtcatcgattcaatctactcgttggatgtcttaagaatgatagtagacaag
ttaacagaaagggacaatgtgctgatggcgacttacatcggtaggaagatatttccggat
gtctacccaagtgtgtccctaatacaaagggtgttcaacgtgtttgatagatggttgctt
gcgtctgggaattctggatatactttgttgaagacgtatgaggccctggtgactggggtt
atactgaagaaggagacttcacaatatataagatcagaagaattcttatctaatacactg
tcgggattggaagctaacgaaagagatgtcgccacagaattgatccagcttcttagtgca
gacgacgtaactcctcatcatttaacacaggtgatggggttgtttcggctatggggtcat
cctgaagtcgatgcgctgaaggggctggaaaaggttcaaaagatagggaccgcaacaaag
ttcatctccgagtactcgagtttgttggcctgtagaaaattcaaggagatcttctatatg
gaatactttaagaagaacaggaaatatccagagtgtattgtaagtgaagaatgctggttt
tatgagaacgttgtgactggggctgtaatcaatacaaaagatcctagataccacttgtct
gattgggatttggttgaatcaaaggaaacattttcgatcccaacgacattcaatctgtcc
atgatagtatctgatacagcgataagccctagccgagaagaaatcaagaaatgttccgat
gaagggagagcagcaatggatcccagcattaggagaggtgtcttgaagtggatgaaagac
ggcttaataaattgtgatggactattaaggggaatcgataagaaaatgaatggactagac
atagaagagagggttatcgggctctatccaaaagaaagagagatgaaccctgttgcgagg
atgtttgccttaatgaccctcaagatgagatcttatgtggtcatcactgaaaacatgtta
tctgaaaacatattaccctatatacccggaatcactatgacatataacatgctggatctt
gcaaaagagatgattagggcaactcgatctcaagggaaacaaggagagttttccagaaca
ttttgtatcaacatggactttgaaaagtggaacctaaatatgagaaaggaaggaacatat
tatgtgtttcaagagcttgggagattattcgggttaccaactttgtataacaaaacatat
gacatattcaggaactccactatctacttggcagacggatcttacaaccccaagttcgac
agtgacctacaatgggttgatgataaatctggtaagtcttatgaggggcacatccgaggt
tttgaaggactccgacagaaagggtggacggtgtttactgttgtgttgattgcctatgtg
tgcgattcgctggggatatcatttcgacttatggggcagggggacaaccaggtactgatg
gtcacaattcactcgaagaatgctcggttgtctggaatcgacagtcaagccagtatcaat
gaaatttcagataagatcaaatccctgatatccagattacaggaggtatttaatggtgtt
ggattacccttaaaaccattagaaacatgggtatcagatatttatttctcatatggaaaa
atgccaatctacaagggggtccctttgtgtagttcgctgaagaggatatctaggatattt
tacttctcaaatgaagacttgatgactgtcgacaatgcactcggagcagtaactgccaat
tctcaagctgcagtgatggcggacatccatccagctgtaccgtattttatagcaaaatgg
cagcacttacaatgtcttagtgtcttctctaggtatcacccgctggtgggagaaaagatg
gactgggatattgatagttatcggttcacattaaggatgaaagacgggacaatatgggat
gatgagcaaccaaatggtttttctagagagattcgactgatggcaatggcttctatccca
aaaacgttgggagggttcaatattgtaacatacttcgacatgatcttgagaggatattcg
gaccctcctatgaaggattaccagtggttgttgatcctgacaaagggctcaactggtgcc
ttgaagactgctcttaagaattggtatagggttgttctatctccctctattgattatttg
catttgattcaagatccaacttctttaaatttattatgcccgccaaattccaagacccta
atcaaaagattgataagtgaaaccataacatctttagacactcaatctgagtttgccggg
tggttccaagaactaatggagataagtgcagagaaaaagatgggaaccttggttgagaag
ttaacatccaaggatgaggtgaatgtcagactgtgtcatgacatacttggggcgactctg
tatggatactctgaatcaatctcttcaaaagtggataaaactgttaccctctctaggatg
acagtgacttccaaagatgtagtatccaaacttgctattggggagaagaaaacctggaat
tatttcctatggagaactaactatgatcagggtgaggaggtagtgagtctttgtccttca
gagcagataagacacttgaggaaaaagggatggaagaaggatgttgtcgggatttccaca
ccatatcctcatcattttctaggaggggaagacgagacagaccgcccggattcttatgta
gaggtagtcgtgaacgatgttgtgttaagtcaccctgatcgacttatactcaccactggg
tcatccctgccatatttagggagcgtaaccaaggagaagttacacagtacatccgcaaga
gcagcatatgggacagaaccattgatcacgcgtcctataaaacttctacgggccatagga
tggttcattgatgaggagtccaactgggccgaatcaatcaggaacttgcttaaggcggtg
acagatcttgatcctggaaaggtcatctctataccagaacacgtaaagggatcaatgatg
catagatatttggatatggcactcgcccacggatcattatggatgccatcatttggacct
gcttctcacctatcaatgtctacaaatactctactggagtatgcaaaaggctccaaaaat
gtaactctacaattccaggctatgcttggactcatccagttctgtacaatcaaccggcta
ctatcaagtgagccaagaaaaatcgttagagtgtaccgaacctgcccacattgcatcaaa
ccagtggatgaacctaaagaagatcttccaactccacttacagaagaggatatcccctca
agacccgataatccctatttgtacgtagaacaagagaagatagccctggtgcacaagagg
gaattagacaactatgagagtttgcctattatccacagaagctatctactaacgtatcct
catattgggagaagacttttgaccgagatcttagcaactcgggtagctacgtcaatacta
tacaattcacaggaagctgagtccggaatgactgatatcgctgggctgagtagaacaata
ttcctcaagttggacatctacacgacattcttgacagcgattaagatgatctggatagga
atatcgagtactcctcgagtcatgtctggtgaagtattcccttcatggtcttttctaaag
aaatcgatcattcgaagaatatgggaaagtcccccttcatcattttcaatcttagcaggg
ttctacttatgggaggagacagtgcgtgaactctcagacttgccatgggcagtgatgcct
ctcagttatccagccacaccgacatcaatcggaattgcagccaagaattcactgattagg
cttgcacagaaaacaacggagatcaagataaactcatcctggatagtgtcaccacttgtc
aaagtagaccccgggatattacttaaaagcaatttattgttttggaggggaggatttaag
gcacaatgttcggattgtatccaagcagggatgtcatgtagaattcgatcatattatgca
tgggacgatctttctcgaatcagatgcaatcagggtcatagtgtatttaccttaaaggct
tggaggatgttaaagaaaatcgtcatggatatagagacaattggggatacgatcccatct
gttcctagaaaacagtactcacctgaagttagtaggttatcgttgactcgaagtgaggga
acatcacagatcttggtgaagtcttctgaaatccaggggtactccgagttccctcatcag
gtcccgggaaacgaatacttagagaggccagatcttaatgttcaactaagatactcctac
tccatccctactaaggctttatatagaattcacgaagggctgtcagctctagagtctctt
agagattacggcgcaatcttagtattaggagatgggttcggatattcctcagttatgtgc
aagttcatgtgcaaaaactctagagtctattcctggacattgatcgatgcatcacccgga
gtccagcactgtttgaggttatcaaagcccccaacacattactccagtcatctaaagata
gacataacgtctacaatagaccttctgtcagatgtatccaacccgaacttcccaaagaca
ttgtctaccttctgtcatgataaacaaatagatctgatcatcagcgaggttgagttactt
tactcaggggcaataatgagtccttcccagattgtcatgatgtattaccaatctggaaca
acccgtatcttgcacaaatttgacttcaaggaattttctgagatagctgaattgattcaa
tgtatgaggcattgcttctcggattgggtgatatttcaaaccccttctgttggtttccat
tctggagaactgtgggtctatatgagtgaaccgagacaaacaatcatcaatcacaaatac
ttgtcatacaatgccacaatagccatatatgacaagatgagatttgcccatgagaatatg
ggaaggttccatccgggagagtaccttgatcatgtcaaccaatatttagacaacacatat
ttagcaagttttagggagcaacttttagacacctggtttcaggatgctacgatcatgtat
tggaaagaacaagacttctcgcaactttattattctttaaggacaggtaagaggccatca
ttcgtgtatgatactcaaggaaatactgtatattacttgcatgcagatatgactgagaag
ttatttgagaggttaatgaccttagccctgtcacaattggaagacttacaaaatcagtta
cctgttattttaagtagaaactggaagttgaagtgggaacggtcccaagaaaaagtagga
gtaagaagttcatacaaatgggcaccagctctgtctacagaagggcacacacccattcca
catagagtcaagacatcaattctgagtcaccttccaggagttatggccattagggaagga
aagaacaagtacactgtcatcggaaacaaaataaggttcactcattgttcacaatcgccg
cgagagctaaagtttgcgataagtagaatggcgacattctcatcaccctatgcatag
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integrated database retrieval system
