Viruses: 1460819
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Entry
1460819 CDS
T40000
Symbol
orf1, Cnrmvgp1
Name
(RefSeq) Cherry necrotic rusty mottle virus; replicase
KO
K26628
Betaflexiviridae RNA replication polyprotein
Virus
129143
Cherry necrotic rusty mottle virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
RdRP_2
Viral_helicase1
Peptidase_C23
2OG-FeII_Oxy_2
2OG-FeII_Oxy
AAA_22
TERB2
Atrophin-1
DUF7444
Motif
Other DBs
NCBI-GeneID:
1460819
NCBI-ProteinID:
NP_059937
RS:
NC_002468
UniProt:
Q9IH80
LinkDB
All DBs
Position
NC_002468:118..6234
Genome browser
AA seq
2038 aa
AA seq
DB search
MALHTITPAESVLAQFSSEEASRIGSSAIANFSRLEADNHNLFHYHLPAYAKKKLSARGF
YLSPFSYETHSHPVSKTIESHLINIKLPNYISEDFLIVGIKDNKLSVLRKEKKLRFLEAV
NRCVSSHDVRRYGPSFHFEQAESNWKNDFSDLNLAPGVQSLLPRILFDKGKTRDAQIFLY
DELHYWSMKDIVDFLEISRAKTVIGSFVFPTEVLAGTYKSLNPWAYDFKIKGDKLIHAPD
GVWAESYEQPLAAGQLLKYNKILTRLGPYSVQVRDSIFSHCLVIINRDDLITENYRVYSD
FDAISIKRLNYLGGNADDVIPVRYEVILSIFKYIRTLKKPDLQLGMAKHRQLVDDPTGFE
IRFIEDFVQFILENHERFNLIGQSFSNFLSAACIERLPGYMQRFFSSFKGYSLGRFIEEI
ESFNFTIRCKTYSRFGFKESWSELEEEECSKLDPFFSQLSLRREMSSDYPTFINQAVLSI
FSEPHQNLIKRLVTCFIAAWVGKTDEGYYTSLFSLKKSLSQKGHKLFLLHDDKYSSLVIL
ANLMNSFIFKLSLKNEVSRRLRLRGSIRGLIRCDLPMENPADKIQGRVINNYAKVVSELL
AISNEGAITCILLETSWLSEQLLNLTNQFLSPSAQKKNVQKQEEVIKKEQSEIKKKEAQR
KKRDREDSKDSKNAEEKEEGITFKDKSSFASSQMEMDSLIDGNYLKQRALPCDTFISSMI
KVGPFSDSNVIEFVRNLSFEQGFQHSGRKALFFSEGNFSYGFNSVKYESHGWPIVFKELY
GDRFNSCLVQHYTKAATLGLHKDDEDCYEKDHEVMTINLFGKATLFFTSDSSEKIDRNDP
KKFMEITLSHGEYILMPRGFQQSYKHGVKDTQAGRISLTFRLQSRDLAGKKIPTLNNSNL
EPDDDNEGGSYYEEMNKCSISAAPSSMQCSLSTFPVKADGDCFWHAVSSIFGLEALELKQ
IVKERAAAENCIDAVHAQDFKNEMEAKVYASNASVTATCFLMNIKLVIKLVGLDCDSWVV
VEPLASSKEKTALGYLILNQKSHHFDLAVPKEGCVIRAVSEFLKQNPTKILSVLSANCSK
DLLHELMSGLGIQEFFLEEIFSVFDINAEVSDGEKTRNLNPKGSRYAKFLAEQGHFSYCP
GTKVSSNLGSFKAPSGGQMIPDDQYENFLRGNANVIPFTPSLPAAKKLASSLLSGQTGVI
NSKIISGQYDWLADSNKLCFDERKVGTIVGTFGSGKSHNVIELLRHNLGYQNLVISPRRS
LKEQFISMLDLVKARSKGKKASTEVVTFEVALKKSGLLKRVRIFLDEVQLLPPGYLDLIC
LIAGPTASILVMGDPAQSSYDSADDRMAFIGDKGCLDTLLEGKRYVYLSESKRFRNPMFL
GRLPCTFDSSRVTLEKEEYAVFDNFKAFKGDYLAPKMKTFLVSSFTEKTVVKANMGKNVS
VFTFGESTGMNFDYVCVLLTQDSMLVDERRWVVALSRAKMNISFINLSGLSLSEFCTQMV
GGVVHKFFTGTATFNDLRELLPGEPIFSKKFQRLGNDEVDREARLSGDPWLKTKIFLGQR
SVPVLHEKVEDEGLKEIKVKVHCPVGSMGGLFSEMQSKLKAKEAREHRIDSIVTEQFAEV
HKGRGKIMTAAPDNFESIYPRHKSGDTATFLMAARKRLKFSFPANERQKYLAAIPCGDTM
LKVFLEKVKLKPAFDHLLFDEARNDFEEKKLGKSMATLENHSGRSDPDWEVEKALIFMKS
QLCTKFDNRYRDAKAGQTLACFHHNVLCRLAPYVRYIEKKVFKALPRNLYIHSGKNFDDL
QDWVIQNNFVGTCTESDYEAFDSSQDANILAFEVSLMNYLNLPRDLIEDYKHLKFNTHSK
LGRFAVMRFTGEAGTFLFNTLANMVFTFMRYETSGRESICFAGDDMCANKLLRKKGDFEH
VLNRMTLKAKVQYTTEPTFCGWRLGSFGIVKRPQLVQERILIALEKGNFIECIDNYAIEV
SYAYKLGERLISIMSEKELDAHYFCVRTFLQNKNLFRSNALDYFSESGSCSSPDRNFS
NT seq
6117 nt
NT seq
+upstream
nt +downstream
nt
atggcccttcatactattaccccagctgagagcgttcttgctcaattttcttcagaggaa
gctagccgtattggatcttctgctatcgctaacttttcaaggcttgaggctgataatcat
aacctgtttcactatcacttgccagcctatgccaagaagaaattgtctgcaagaggcttt
tatctctcacctttttcctatgagactcatagtcatcctgtgagcaaaaccattgagtcc
catttaattaatattaagctgcctaattatattagtgaagatttcttaattgtaggcatt
aaggataataaattgagtgttctaagaaaagaaaaaaaattaagatttttagaagctgta
aatagatgtgtatcttcccatgatgttcgacgttatggtcccagttttcactttgagcag
gccgagtccaactggaaaaacgacttctctgatttgaatttagctcctggtgtgcaaagt
ttgcttccaagaattctttttgataagggtaaaactcgagatgctcaaatcttcctctat
gatgagctgcactattggagtatgaaggacattgtggattttcttgagatttctagagca
aagactgtcattggctcttttgtctttcccactgaggtcctagctggaacctacaagagt
ttaaacccttgggcttatgactttaagattaaaggggataagcttatccatgcgccagat
ggggtatgggctgaatcttacgaacagccccttgctgctggtcagttgcttaagtacaat
aaaattttgaccagacttggcccttattcagttcaagttagggattccatcttcagccat
tgccttgttataatcaatcgtgatgatctaatcactgaaaactacagggtttacagtgat
tttgatgcaatatctatcaagagactcaattaccttggaggcaatgctgatgatgtaatt
cctgtgcgctacgaggtgatactttcaatattcaagtatatcagaaccctcaaaaaacca
gaccttcagttgggcatggcaaaacacagacaattagttgatgacccaacagggtttgag
atcagattcattgaggattttgtgcaattcatcctagaaaatcatgagaggttcaacttg
attggccaaagtttctccaactttctgagtgctgcttgtatcgaaagattgcctggctac
atgcaaaggttcttctcttctttcaaaggttatagtcttggtagattcattgaagagatc
gaatcttttaatttcacaattcgctgcaagacatattctagatttggctttaaagagagt
tggtcagaacttgaagaagaggagtgtagcaagcttgatccttttttttctcaactgtcc
ttgagaagggagatgtcttctgactatccgactttcattaatcaggctgtactgtccatt
ttttctgaaccgcatcaaaacctgattaagaggctagttacttgtttcattgcagcctgg
gttggtaaaactgatgaggggtactacacgtccttattttctcttaagaaaagcctaagt
cagaagggtcacaagctctttctcctccatgatgataaatactcatccttggtcattctt
gcaaacttaatgaactcctttatttttaagttgagccttaagaatgaagtttcaaggaga
ttgagattgcgaggaagcattcgtggcctcattagatgtgacttgcctatggagaacccc
gcagataaaattcaaggcagggtgatcaataactatgccaaagttgtcagtgaactcttg
gcaatctcaaatgagggagccataacctgtatacttcttgaaacttcctggctgagcgaa
caactgctaaatctgactaaccaattcctatcgccatcagcacaaaagaaaaatgtgcaa
aaacaagaggaggtaattaagaaggagcagagtgaaattaaaaaaaaagaggctcagagg
aagaaaagggatcgtgaggactcaaaggacagcaaaaatgccgaagagaaggaagagggt
atcacttttaaagacaaatctagctttgcttcctcccaaatggaaatggattctttaatt
gatgggaattatttgaagcagagagctcttccctgtgacactttcatatccagcatgatt
aaggtcggtcccttttctgactctaatgtcattgaatttgtgcgcaatttgagctttgag
cagggctttcaacattctggcagaaaagctcttttcttttcagaagggaacttcagttat
ggttttaatagtgtgaagtatgaatcccacggatggccaattgtattcaaggaattgtac
ggggatagattcaattcatgcttagttcaacattacaccaaggcggctactcttggtcta
cacaaggatgatgaagattgttatgagaaggatcatgaagtgatgaccattaatcttttt
ggaaaagcaacgttgtttttcacttctgacagttcagaaaagattgatagaaatgatcca
aaaaaattcatggaaattaccttgtctcacggggaatacattcttatgccaaggggcttt
caacaaagctacaagcatggtgttaaggatactcaggctggaagaatttctttaacattt
cgacttcaatccagggatctggctggtaaaaagattccaactcttaacaacagcaatctc
gagcctgatgatgataatgaagggggaagttattacgaagagatgaataaatgttcaatc
tcagcagctcctagttccatgcaatgtagcttatcaacatttcctgttaaagccgatggt
gattgtttttggcatgcagtctcttccatttttggtcttgaggctctggagctcaaacaa
attgtcaaggaaagagctgctgcagaaaactgcattgatgctgtacatgcacaagacttc
aagaatgaaatggaggccaaggtttacgcttcaaacgcttcagtcacagcaacctgcttt
ttgatgaacattaagttggttataaaacttgtgggtcttgattgtgacagctgggtcgtt
gtggaaccgctagcttcttccaaagaaaaaacagctttgggttatctcatcctgaatcag
aagagccatcactttgatcttgctgtgcctaaagagggttgcgtgattagagctgttagt
gaattccttaagcagaatccaacaaaaattcttagtgttcttagtgccaattgttctaag
gacttactgcatgaactcatgagtgggttagggattcaagaattctttctggaggaaatc
ttctcagtttttgacatcaatgctgaagttagtgatggggagaaaacaagaaatctaaat
ccaaagggttccaggtatgcaaagtttttagctgagcaaggacacttttcttattgtcca
ggcacaaaggtatcttcaaatttgggttcttttaaggctcctagtggtggtcaaatgatt
ccagacgaccagtacgaaaattttttaagagggaatgcaaatgtgatcccattcactcca
tctctccctgcagcgaagaaattggcaagttcactgcttagtgggcaaaccggagtcatt
aattcaaagatcatttccggacagtatgactggcttgctgatagtaataaattgtgcttt
gatgagagaaaggtggggacaattgttggtacttttggctcagggaaaagtcataatgta
attgagctcctcagacacaatcttggttatcagaaccttgttatctcaccaaggcgtagc
ctaaaggagcaattcataagcatgctagacttggtaaaggcaagaagtaaaggaaagaaa
gcttcaactgaggtggtgacttttgaggtggcactgaagaaaagcggacttttgaagaga
gttagaattttccttgatgaagtgcagctcctcccccctgggtatttggacctaatctgc
ctgatcgctggtccaactgcttcaattttagttatgggtgatcctgctcagagcagttat
gactcagctgatgacagaatggcctttattggtgataaaggatgcttagatactctcctg
gaaggcaagagatatgtttatctcagtgaatctaagcgcttccgaaatccaatgtttctt
gggcgcctcccatgcacttttgattctagcagggtaactttggaaaaagaagagtatgct
gtctttgacaattttaaagctttcaagggggactatcttgctccaaagatgaaaaccttt
ttagttagttcttttactgaaaaaactgttgtcaaagccaacatgggaaagaatgtttca
gtcttcacttttggtgaaagtacaggaatgaactttgattatgtgtgtgttcttctcact
caagatagtatgctggtagatgagcgcagatgggtagttgcgctctccagagctaaaatg
aacatctcctttatcaatttgtccggtttgtcattatcagaattttgcacacaaatggtt
gggggggtcgtgcacaaattcttcacagggacagccacctttaatgacttgagagagctc
ctgcctggagagccaatcttttcaaagaaatttcagaggttagggaatgatgaagttgat
agggaagcaaggttgtctggtgacccatggttgaaaacaaaaatctttttgggtcaacga
agtgttcccgtgttgcatgaaaaagttgaggatgaagggctcaaggaaatcaaagtcaaa
gtccactgtcctgttggatccatgggtgggctcttctctgaaatgcaatcaaaactcaaa
gctaaagaggccagagaacaccgtattgactctattgttactgaacagtttgcagaggtt
cacaaggggaggggaaagattatgacagctgctcctgataattttgaatcaatatacccc
agacacaaatctggtgatacagccacatttctcatggctgcaagaaaaagattgaaattc
tctttcccggctaacgagcgtcagaaatacttggcagccattccctgtggagataccatg
ctcaaggtttttttggagaaagtgaagttgaagccagcatttgatcatctcctttttgat
gaagcaagaaatgatttcgaggagaagaaacttggaaagtcaatggccacacttgagaat
cacagcggcaggtctgacccagactgggaggttgaaaaagcacttatcttcatgaaaagt
caattgtgcactaaatttgacaacagatatagagacgcaaaagccgggcagaccctggcg
tgcttccaccacaacgtgctctgcagattggctccatacgtgagatacattgagaaaaaa
gtgttcaaagctttgccaaggaatctgtatattcactctggtaaaaattttgatgatctg
caagattgggttattcaaaacaattttgttgggacctgcactgaatctgactatgaggct
tttgactcctcacaggatgccaacattctggcctttgaagttagcctgatgaattacctc
aatttaccaagagatcttattgaggattacaagcacttgaagtttaacactcactccaaa
ttagggagatttgcagtcatgagattcacaggggaagctggaacttttctgttcaacaca
ttggccaacatggttttcacttttatgaggtatgaaacaagtgggcgcgagtcaatatgc
ttcgctggtgatgacatgtgcgccaataagcttttgagaaagaaaggggatttcgaacat
gttctcaacagaatgactttaaaagctaaggttcaatacacgactgaacccactttttgc
ggctggcgattggggagttttgggatagttaaaagacctcagcttgttcaggaaaggata
ctcattgcattagagaagggaaacttcattgaatgtattgataactatgcaattgaagtt
tcctacgcctataaattaggtgagaggctgatctcaataatgtctgaaaaagaattggat
gcacactatttttgtgtgaggactttccttcaaaacaaaaatttgttcagatcgaatgcc
cttgattatttctctgagagtggaagttgttccagccctgacagaaatttcagttga
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