Viruses: 1461006
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Entry
1461006 CDS
T40000
Symbol
orf1, CMLVgp1
Name
(RefSeq) Cherry mottle leaf virus; replicase
Virus
131226
Cherry mottle leaf virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Peptidase_C34
RdRP_2
Viral_helicase1
2OG-FeII_Oxy_2
2OG-FeII_Oxy
Adeno_IVa2
AAA_14
AAA_30
Motif
Other DBs
NCBI-GeneID:
1461006
NCBI-ProteinID:
NP_062428
RS:
NC_002500
UniProt:
Q9IMS9
LinkDB
All DBs
Position
NC_002500:178..5841
Genome browser
AA seq
1887 aa
AA seq
DB search
MAFSYRTPQEELLNRLPQTQQEIIGNLQFERLQKEEERRVVSFSYALPEKTKEWFTKSGV
YLSPFSFEVHSHPGCKTLENHILYNIVAPHISKYPYIACLSIKANKMSKMERMGAHSVKN
YDIFNRLVTSRDKSRYGDLTQPTRVGGPKGSNYFIHDEIHYWSRTQLETFLDIKKPRNLW
VTMVFPPEILKGYKSSVLPFLYEFEIDKGNLIYMPDGSRSESYTQSIENGYLLSTNCISF
KNKDGLRKQYSVTLVYTLGSHHVFHIFPNMGLIEDEIRRFGPYDLFDVGTLFKKPVRVPI
QGFPLSTFKKIFIYMSSLKKPDEQSAVAKLRQLCDAEISIEAVFLIQEFAKRIEKGGILS
WSCSFFDYLKDHFFDKIPFKDTLEKIGLADDFTRRLINLKPLSFDIRADQERKLIAMVFD
AVWPDQQSEDYLAAEISKGKKRVINGNAFVNGVSSTKNFLLGRAREVQPDYPEDFQSDDL
AHTPIRLSGDEDYSRSAPRTPAIFRTARTEYNVLPPSSGAPLRIGFERFYGKVEKTEYQK
DLESRKRKIALSALDFHVNKTKNKDVESYLAAQGRRDEQTRLKNLALTRLSKVKGRVRFV
PTCTASKSSEKPIGKQQEEKKNELVPKTGHQDSTTLPRDEFINSILKKSEVVREKIEATE
VKEFDCSKFILEPVCKHDLMRTNEQVSALVRQSLNALCFRPNKGKKSVYVTLDSPMVYFH
NSISYPSIEATGLIKDWILSKAEDYGVPFNAALVQVYEKDCILGMHKDNESCYGNHPILT
VNVSGKAVFSTDCCGNTMELDSGDELLMPEDFQRKFRHGVKSITDGRMSVTLRVHERDFS
FEEKRKFIEGKYDCLFVAMAAMISKKPEDIMFKCLNTLDRCVMNKGCDLTDLRSICSGYE
IKVECQGDCGLVEIGDIGLPLGKLILRGNHFTLCSKRRSNLDSLANSSKDVSSLSGGIDY
VMVNFIKRLRSIEPDLSRSEIKVDIKRGGKLLKCLMEGLTGIVSHNSTHDGWRLLKGVKN
SADMRSLIGAMRGNVDGMEKNKLLNELEELNFQKVPIYGIFGFAGSGKSHAIQNLIAKEF
RGSQGLMIVCPRKFLAKDWSEKGVEEMDIRTFESALKSDIKGKRVFILDEVTLLPRGFTD
LLLMKIHMEGNLKSSTIICLGDPLQASYFSQKDDSYLEREPEVKRLFKDGVEYKWFSHRV
NKFTARQLSITTTNTFPGIDSQSQIYGDVQSAICSIQKTGIDVEIILVASMIEKELYCNL
GRTITFGESQGLTFGVGVVVLSEETKLCSDAHIMVAITRFNKGYSFALGSKGTKDEYMRG
MKNGLLSRLTSNSGASKDFIMSSSSVKLNLSEKLIKTGAGIDEMDREERLSGDPWLKSQI
FLGKRFHLREPLGQVVNLEDSAIKCHLPICNNQTLYVELSKMRAREDREFKGKDGWSKQF
REEAGPNWKSPYKVAQPMNFEAIYPRHRMDDDITFYAAIKKRLRFDNVANNYAKFKQSQS
RGQYLLKVFLEHVNLKPSRNQALLNQCRQEFEETKLNKSAATIGAHSQRSDPDWPLDRIF
LFMKSQLCTKFEKRFEDAKAGQTLACFQHRILVEFSPWCRYVEKILTACTPDNFYIHQRK
NFSELENFAKRFSDGSICVESDYTAFDVSQDHTILAFEVELLRFIGWDEKILNSYIKMKC
TLGCRLGGFAIMRFTGEFSTFLFNTLANMAFTFCRYEVKKGTPICFAGDDMCALRNLREV
STHEHILDKLSLKAKVNRTTVPMFCGWRLCQDGLIKEPCLIYERLCVAIENGRLLDVIDS
YYLEFSFAYKLGERLFQYLEIEQLNYHQVLARFFVKNSHLLRGSAREGISELSWLSDGDD
NDDESSQVKNRRRGYSNIWGEKLQSLF
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggctttctcatatagaacgccacaggaggagcttctgaacaggttaccccaaacccaa
caggagataattggcaatcttcaatttgaacgattgcagaaagaggaagagaggagagtg
gttagcttctcttacgctttgccagagaaaactaaggagtggttcactaagtcaggggtc
tatctctcacccttttcttttgaagtgcattctcatcctggttgcaaaactctggagaac
cacatattatataatatagtggccccgcacatatccaaatatccctacatagcctgcttg
agtattaaagcaaataaaatgagcaaaatggaaagaatgggagctcatagtgttaagaat
tatgatatatttaacaggcttgtaacttcaagggataagtctcgctatggagatcttacc
caaccaactagggttggaggtccaaagggttccaattatttcattcatgatgaaattcac
tattggtccagaactcagctagaaactttccttgatataaagaaaccacgtaatctgtgg
gtcactatggtgttcccccctgaaatattgaaaggttacaagagttctgttctgcctttt
ttgtatgaatttgaaatagacaagggtaacctcatctatatgcccgatggtagccgatct
gaaagttatactcaatcaattgaaaatggttacctgcttagcacaaactgtataagcttc
aagaataaagatggtttgaggaagcagtacagtgtcacattggtctataccttgggctca
catcatgttttccatatattcccaaacatgggtttgattgaggatgagataaggagattt
ggtccatatgatctctttgatgtgggaactctcttcaaaaaaccagtgagagtaccaatt
cagggcttccctctcagcactttcaaaaagatatttatctacatgagttctcttaagaag
cctgatgagcaatccgccgtggcaaagctaagacaactttgtgatgctgaaatttcaatt
gaagctgtcttcctcattcaagaatttgctaaaagaattgagaaagggggtattttaagt
tggtcatgctctttttttgactacctcaaggatcatttttttgacaaaattcctttcaag
gacactctggagaaaattgggttagcagatgatttcacaaggagattgattaacctcaag
cctctatcctttgacataagagccgatcaggaaaggaagcttattgctatggtgttcgat
gcagtttggcctgatcagcaaagtgaagactatcttgctgcagaaatctctaaaggaaag
aagagggtgatcaatggcaacgcatttgtgaatggagtatcaagcacaaaaaactttttg
cttgggagagctagggaggtgcagccggattacccagaggattttcagtctgatgatctt
gcccacaccccaattagattatcaggagatgaggactactcaagatctgcaccaagaact
cctgctattttcagaacggcccgaactgaatataatgtgcttccccctagttcaggagct
ccattacgcattggtttcgagagattctatggtaaagtggagaaaaccgagtaccagaag
gatctagagtcaaggaaaagaaagattgctctctctgcattagattttcatgtgaataag
acaaaaaataaagacgtggagagctatcttgctgctcaagggagaagggatgagcagact
aggttgaagaatctggccctcactagactctccaaagtcaaaggaagagttagatttgtc
cccacctgcactgcttcaaaatcaagtgagaaaccaattggaaagcagcaggaggagaag
aagaatgaacttgttcccaagacaggtcatcaggattccacaactttaccgagagacgag
ttcattaattcaatattgaaaaagagtgaagttgtgagagaaaagattgaggctactgaa
gtgaaagaatttgattgttcgaagtttattttggagccagtctgcaaacatgatcttatg
aggaccaatgagcaggttagtgctttggtaagacaatcattgaatgcattgtgcttcaga
ccgaacaaaggaaaaaaatccgtttatgtcactcttgattcaccgatggtatactttcac
aattcaatttcctacccatcaattgaggcaaccgggcttattaaagattggatcctgagt
aaagctgaggattatggtgtcccattcaatgcggctcttgtgcaagtgtacgaaaaagat
tgtattctagggatgcacaaggataatgaatcttgttacgggaatcatccaattctaact
gtcaatgttagtgggaaagcagtcttctccactgactgctgtggcaatacaatggaactt
gattcaggggatgaacttcttatgccagaggatttccaaagaaaatttaggcatggggtg
aagtcaatcactgacggtagaatgagtgtcacactcagagtgcatgaacgagacttctct
tttgaggaaaagagaaaatttatagaaggtaaatatgattgcctctttgttgcaatggcc
gcaatgatttcaaaaaaaccagaggacataatgtttaaatgtcttaacactcttgacaga
tgtgtgatgaataagggatgtgatctcactgacctgaggtccatatgcagtggatatgag
atcaaagttgaatgtcagggtgattgtggtttggtggagattggggatattggacttccc
cttggcaagttgattttgagggggaatcatttcaccttgtgttcaaagcgaagatcaaat
ctggattccttggccaactcctcaaaagatgtctcaagtttgtctggaggtattgactat
gtcatggtgaacttcatcaaaagattgagatcaattgaacctgacctctccagatctgag
atcaaggttgacatcaaaagaggtggaaagttactcaaatgtcttatggaaggtcttact
ggaatcgtttcccacaactctacccacgatggttggagattgcttaaaggggtcaagaat
tcagccgacatgaggtcattaataggggcgatgaggggcaatgttgatgggatggaaaag
aacaaacttctgaatgaacttgaagagcttaatttccagaaagtccccatttatggaata
tttggatttgccggctcagggaagagtcatgctatacaaaacctcattgctaaagagttc
agaggatctcaaggtcttatgattgtttgtcctagaaagtttctagccaaggattggagt
gagaaaggtgtggaggagatggacataagaacatttgagagcgctctaaaatcagacatc
aagggtaaaagggtatttatacttgatgaggtgactttgctccctagaggtttcactgat
cttttgctgatgaagattcatatggaaggaaacctaaagagttcaaccatcatttgctta
ggagatcctttacaagctagttactttagccagaaggatgattcctatcttgagagagag
cctgaggtcaaaaggttgttcaaagatggtgttgaatacaagtggttcagtcatagggtt
aacaaatttacagctaggcagctgtccataaccacgacaaacactttccctgggattgat
agccagagtcagatctacggagatgttcagagtgcaatttgctccattcagaaaactgga
attgatgtggagataatattggttgctagcatgatagagaaagagctatattgcaatttg
ggcagaactatcacgtttggagaatctcaaggtctcacatttggtgttggggttgttgtc
ctttctgaggagacaaagctctgctctgatgcccatataatggtcgctatcacaaggttc
aacaaaggctactctttcgctctgggaagcaagggtacaaaagacgaatacatgagaggc
atgaagaatggccttttaagtaggttgacttcaaactctggggcaagtaaagacttcata
atgagttcttcatcagtgaagctgaatttgagcgagaaattaatcaagaccggtgctggt
attgatgaaatggacagggaggaaagattgtctggtgacccttggcttaagagtcaaatt
tttcttggaaaaagatttcatttgagggaaccgctaggtcaagttgtcaatctagaggac
tcggcaattaaatgccatttgcctatatgcaacaatcagactctttacgtggagctgtcg
aaaatgagagcaagagaggatagggaattcaaaggaaaggacggttggtcaaaacaattc
agagaggaggcaggtccaaattggaaaagtccatataaggtggcacagcccatgaatttt
gaggcgatataccccagacatagaatggatgatgacatcaccttttatgctgcaatcaag
aagaggctcaggtttgacaatgttgcaaataactacgccaaattcaaacaatcgcaatcc
agggggcaatatttgctcaaggttttcctagaacatgtgaacctaaagccaagtcgaaat
caagctctgctcaatcaatgcagacaggaatttgaagaaaccaagttgaacaaaagtgca
gccacgataggtgcccattcccagaggtcagatccagactggccattggataggatattc
ctgttcatgaaatcgcaactgtgcacaaaatttgaaaagaggtttgaagatgcgaaggct
ggtcaaacccttgcatgctttcagcacagaatactggtggaatttagcccttggtgtagg
tatgtagagaagattttaactgcatgcacgccagacaacttctacatacaccagaggaaa
aatttttcggaacttgaaaactttgccaagaggttttctgatggatcaatttgtgtggag
tcagattacacggcatttgacgtttcccaagatcatacaatacttgcttttgaagttgag
ctactaagattcatagggtgggatgagaagatcttgaacagctacattaaaatgaaatgc
acactagggtgtagacttggaggctttgctataatgagattcacaggggagttttccacc
tttttgttcaacactcttgcgaatatggcatttaccttctgcaggtatgaagtcaaaaaa
ggcaccccaatatgcttcgctggggatgacatgtgtgctctgagaaatttgagagaggtt
tcaacgcatgagcatattttggacaagttgagtctcaaggccaaagtaaacagaacgacc
gttccaatgttttgtggatggaggttatgccaggacggattgataaaagaaccatgttta
atttacgagaggctttgcgtggccatagaaaacggaagattgcttgatgtcatagattcg
tattacctggaattttcatttgcctacaaattaggtgagcggctatttcagtatcttgaa
attgaacaactgaattatcatcaagttttggccagattctttgtaaaaaatagccatctt
ttgagaggaagtgcaagggaagggatctctgaattgagctggttatctgacggggatgac
aatgatgatgagagctcacaagtcaaaaatcgcagaaggggatattccaatatctggggt
gaaaagctccaaagtctattctga
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