Viruses: 1461213 Help Entry 1461213           CDS       T40000                                  Symbol HRVBgp1 Name (RefSeq) rhinovirus B14; polyprotein   KO K25281   Enterovirus genome polyprotein Virus 12131  rhinovirus B14 Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Rhv RdRP_1 Pico_P2A Peptidase_C3 Rhv_5 RNA_helicase Pico_P2B Pico_P1A P3A Calici_coat RdRP_4 nSTAND3 Zeta_toxin AAA_16 Motif Other DBs NCBI-GeneID:  1461213 NCBI-ProteinID:  NP_041009 RS:  NC_001490 UniProt:  P03303 Structure PDBPDBj LinkDB All DBs Position NC_001490:629..7168 Genome browser AA seq 2179 aa AA seqDB search MGAQVSTQKSGSHENQNILTNGSNQTFTVINYYKDAASTSSAGQSLSMDPSKFTEPVKDL MLKGAPALNSPNVEACGYSDRVQQITLGNSTITTQEAANAVVCYAEWPEYLPDVDASDVN KTSKPDTSVCRFYTLDSKTWTTGSKGWCWKLPDALKDMGVFGQNMFFHSLGRSGYTVHVQ CNATKFHSGCLLVVVIPEHQLASHEGGNVSVKYTFTHPGERGIDLSSANEVGGPVKDVIY NMNGTLLGNLLIFPHQFINLRTNNTATIVIPYINSVPIDSMTRHNNVSLMVIPIAPLTVP TGATPSLPITVTIAPMCTEFSGIRSKSIVPQGLPTTTLPGSGQFLTTDDRQSPSALPNYE PTPRIHILGKVHNLLEIIQVDTLIPMNNTHTKDEVNSYLIPLNANRQNEQVFGTNLFIGD GVFKTTLLGEIVQYYTHWSGSLRFSSMYTGPALSSAKLTLAYTPPGARGPQDRREAMLGT HVVWDIGLQSTIVMTIPWTSGVQFRYTDPDTYTSAGFLSCWYQTSLILPPETTGQVYLLS FISACPDFKLRLMKDTQTISQTVALTEGLGDELEEVIVEKTKQTVASISSGPKHTQKVPI LTANETGATMPVLPSDSIETRTTYMHFNGSETDVECFLGRAACVHVTEIQNKDATGIDNH REAKLFNDWKINLSSLVQLRKKLELFTYVRFDSEYTILATASQPDSANYSSNLVVQAMYV PHGAPKSKRVGDYTWQSASNPSVFFKVGDTSRFSVPYVGLASAYNCFYDGYSHDDAETQY GITVLNHMGSMAFRIVNEHDEHKTLVKIRVYHRAKLVEAWIPRAPRALPYTSIGRTNYPK NTEPVIKKRKGDIKSYGLGPRYGGIYTSNVKIMNYHLMTPEDHHNLIAPYPNRDLAIVST GGHGAETIPHCNRTSGVYYSTYYRKYYPIICEKPTNIWIEGSPYYPSRFQAGVMKGVGPA ELGDCGGILRCIHGPIGLLTAEGSGYVCFADIRQLECIAEEQGLSDYITGLGRAFGVGFT DQISTKVTELQEVAKDFLTTKVLSKVVKMVSALVIICRNHDDLVTVTATLALLGCDGSPW RFLKMYISKHFQVPYIERQANDGWFRKFNDACNAAKGLEWIANKISKLIEWIKNKVLPQA KEKLEFCSKLKQLDILERQITTMHISNPTQEKREQLFNNVLWLEQMSQKFAPFYAVESKR IRELKNKMVNYMQFKSKQRTEPVCVLIHGTPGSGKSLTTSIVGRAIAEHFNSAVYSLPPD PKHFDGYQQQEVVIMDDLNQNPDGQDISMFCQMVSSVDFLPPMASLDNKGMLFTSNFVLA STNSNTLSPPTILNPEALVRRFGFDLDICLHTTYTKNGKLNAGMSTKTCKDCHQPSNFKK CCPLVCGKAISLVDRTTNVRYSVDQLVTAIISDFKSKMQITDSLETLFQGPVYKDLEIDV CNTPPSECINDLLKSVDSEEIREYCKKKKWIIPEIPTNIERAMNQASMIINTILMFVSTL GIVYVIYKLFAQTQGPYSGNPPHNKLKAPTLRPVVVQGPNTEFALSLLRKNIMTITTSKG EFTGLGIHDRVCVIPTHAQPGDDVLVNGQKIRVKDKYKLVDPENINLELTVLTLDRNEKF RDIRGFISEDLEGVDATLVVHSNNFTNTILEVGPVTMAGLINLSSTPTNRMIRYDYATKT GQCGGVLCATGKIFGIHVGGNGRQGFSAQLKKQYFVEKQGQVIARHKVREFNINPVNTAT KSKLHPSVFYDVFPGDKEPAVLSDNDPRLEVKLTESLFSKYKGNVNTEPTENMLVAVDHY AGQLLSLDIPTSELTLKEALYGVDGLEPIDITTSAGFPYVSLGIKKRDILNKETQDTEKM KFYLDKYGIDLPLVTYIKDELRSVDKVRLGKSRLIEASSLNDSVNMRMKLGNLYKAFHQN PGVLTGSAVGCDPDVFWSVIPCLMDGHLMAFDYSNFDASLSPVWFVCLEKVLTKLGFAGS SLIQSICNTHHIFRDEIYVVEGGMPSGCSGTSIFNSMINNIIIRTLILDAYKGIDLDKLK ILAYGDDLIVSYPYELDPQVLATLGKNYGLTITPPDKSETFTKMTWENLTFLKRYFKPDQ QFPFLVHPVMPMKDIHESIRWTKDPKNTQDHVRSLCMLAWHSGEKEYNEFIQKIRTTDIG KCLILPEYSVLRRRWLDLF NT seq 6540 nt NT seq  +upstreamnt  +downstreamnt atgggcgctcaggtttctacacagaaaagtggatctcacgaaaatcaaaacattttgacc aatggatcaaatcagactttcacagttataaattactataaggatgcagcaagtacatca tcagctggtcaatcactgtcaatggacccatctaagtttacagaaccagttaaagatctc atgcttaagggtgcaccagcattgaattcacccaatgttgaggcctgtggttatagtgat agagtacaacaaatcacactcgggaattcaacaataacaacacaagaagcagccaacgct gttgtgtgttatgctgaatggccagagtaccttccagatgtggacgctagtgatgtcaat aaaacttcaaaaccagacacttctgtctgtaggttttacacattggatagtaagacatgg acaacaggttctaaaggctggtgctggaaattaccagatgcactcaaggatatgggtgtg ttcgggcaaaacatgtttttccactcactaggaagatcaggttacacagtacacgttcag tgcaatgccacaaaattccatagcggttgtctacttgtagttgtaataccagaacaccaa ctggcttcacatgagggtggcaatgtttcagttaaatacacattcacgcatccaggtgaa cgtggtatagatttatcatctgcaaatgaagtgggagggcctgtcaaggatgtcatatac aatatgaatggtactttattaggaaatctgctcattttccctcaccagttcattaatcta agaaccaataatacagccacaatagtgataccatacataaactcagtacccattgattca atgacacgtcacaacaatgtctcactgatggtcatccctattgcccctcttacagtacca actggagcaactccctcactccctataacagtcacaatagcacctatgtgcactgagttc tctgggataaggtccaagtcaattgtgccacaaggtttgccaactacaactttgccgggg tcaggacaattcttgaccacagatgacaggcaatcccccagtgcactgccaaattatgag ccaactccaagaatacacatactagggaaagttcataacttgctagaaattatacaggta gatacactcattcctatgaacaacacgcatacaaaagatgaggttaacagttacctcata ccactaaatgcaaacaggcaaaatgagcaggtttttgggacaaacctgtttattggtgat ggggtcttcaaaactactcttctgggtgaaattgttcagtactatacacattggtctgga tcacttagattctcttcgatgtatactggtcctgccttgtccagtgctaaactcactcta gcatacaccccgcctggtgctcgtggtccacaggacaggagagaagcaatgctaggtact catgttgtctgggatattggtctgcaatccaccatagtaatgacaataccatggacatca ggggtgcagtttagatatactgatccagatacatacaccagtgctggctttctatcatgt tggtatcaaacttctcttatacttcccccagaaacgaccggccaggtctacttattatca ttcataagtgcatgtccagattttaagcttaggctgatgaaagatactcaaactatctca cagactgttgcactcactgaaggcttaggtgatgaattagaagaagtcatcgttgagaaa acgaaacagacggtggcctcaatctcatctggtccaaaacacacacaaaaagtccccata ctaactgcaaacgaaacaggggccacaatgcctgttcttccatcagacagcatagaaacc agaactacctacatgcactttaatggttcagaaactgatgtagaatgctttttgggtcgt gcagcttgtgtgcatgtaactgaaatacaaaacaaagatgctactggaatagataatcac agagaagcaaaattgttcaatgattggaaaatcaacctgtccagccttgtccaacttaga aagaaactggaactcttcacttatgttaggtttgattctgagtataccatactggccact gcatctcaacctgattcagcaaactattcaagcaatttggtggtccaagccatgtatgtt ccacatggtgccccgaaatccaaaagagtgggcgattacacatggcaaagtgcttcaaac cccagtgtattcttcaaggtgggggatacatcaaggtttagtgtgccttatgtaggattg gcatcagcatataattgtttttatgatggttactcacatgatgatgcagaaactcagtat ggcataactgttctaaaccatatgggtagtatggcattcagaatagtaaatgaacatgat gaacacaaaactcttgtcaagatcagagtttatcacagggcaaagctcgttgaagcatgg attccaagagcacccagagcactaccctacacatcaatagggcgcacaaattatcctaag aatacagaaccagtaattaagaagaggaaaggtgacattaaatcctatggtttaggacct aggtacggtgggatttatacatcaaatgttaaaataatgaattaccacttgatgacacca gaagaccaccataatctgatagcaccctatccaaatagagatttagcaatagtctcaaca ggaggacatggtgcagaaacaataccacactgtaaccgtacatcaggtgtttactattcc acatattacagaaagtattaccccataatttgcgaaaagcccaccaacatctggattgaa ggaagcccttattacccaagtagatttcaagcaggagtgatgaaaggggttgggccggca gagctaggagactgcggtgggattttgagatgcatacatggtcccattggattgttaaca gctgaaggtagtggatatgtttgttttgctgacatacgacagttggagtgtatcgcagag gaacaggggctgagtgattacatcacaggtttgggtagagcttttggtgtcgggttcact gaccaaatctcaacaaaagtcacagaactacaagaagtggcgaaagatttcctcaccaca aaagttttgtccaaagtggtcaaaatggtttcagctttagtgatcatttgcagaaatcat gatgacttggtcactgttacggccactctagcactacttggatgtgatggatctccttgg agatttctgaagatgtacatttccaaacactttcaggtgccttacattgaaagacaagca aatgatggatggttcagaaagtttaatgatgcatgtaatgctgcaaagggattggaatgg attgctaataagatttccaaactgattgaatggataaaaaacaaagtacttccccaagcc aaagaaaaactagaattttgtagtaaactcaaacaacttgatatactagagagacaaata accaccatgcatatctcgaatccaacacaggaaaaacgagagcagttgttcaataacgta ttgtggttggaacaaatgtcgcaaaagtttgccccattttatgccgttgaatcaaaaaga atcagggaactcaagaacaaaatggtaaattatatgcaatttaaaagtaaacaaagaact gaaccagtgtgtgtattaatccatggtacacccggttctggtaaatcattaacaacatcc attgtgggacgtgcaattgcagaacacttcaattcagcagtatattcacttccaccagat cccaagcactttgatggttatcagcaacaggaagttgtgattatggatgatctgaaccaa aatccagatggacaggatataagcatgttttgtcaaatggtttcttcagtggatttcttg cctccaatggctagtttagataacaagggcatgttattcaccagtaattttgttctagcc tccacaaattctaacacactaagccccccaacaatcttgaatcctgaagctttagtcagg agatttggttttgacctagatatatgtttgcatactacctacacaaagaatggaaaactc aatgcaggcatgtcaaccaagacatgcaaagattgccatcaaccatctaatttcaagaaa tgttgccccctagtctgtggaaaagctattagcttggtagacagaactaccaacgttagg tatagtgtggatcaactggtcacggctattataagtgatttcaagagcaaaatgcaaatt acagattccctagaaacactgtttcaaggaccagtgtataaagatttagagattgatgtt tgcaacacaccaccttcagaatgtatcaacgatttactgaaatctgtagattcagaagag attagggaatattgtaagaagaagaaatggattatacctgaaattcctaccaacatagaa agggctatgaatcaagccagcatgattattaatactattctgatgtttgtcagtacatta ggtattgtttatgtcatttataaattgtttgctcaaactcaaggaccatattctggtaac ccgcctcacaataaactaaaagccccaactttacgcccagttgttgtgcaaggaccaaac acagaatttgcactatccctgttaaggaaaaacataatgactataacaacctcaaaggga gagttcacagggttaggcatacatgatcgtgtctgtgtgatacccacacacgcacagcct ggtgatgatgtactagtgaatggtcagaaaattagagttaaggataagtacaaattagta gatccagagaacattaatctagagcttacagtgttgactttagatagaaatgaaaaattc agagatatcaggggatttatatcagaagatctagaaggtgtggatgccactttggtagta cattcaaataactttaccaacactatcttagaagttggccctgtaacaatggcaggactt attaatttgagtagcacccccactaacagaatgattcgttatgattatgcaacaaaaact gggcagtgtggaggtgtgctgtgtgctactggtaagatctttggtattcatgttggcggt aatggaagacaaggattttcagctcaacttaaaaaacaatattttgtagagaaacaaggc caagtaatagctagacataaggttagggagtttaacataaatccagtcaacacggcaact aagtcaaaattacatcccagtgtattttatgatgtttttccaggtgacaaggaacctgct gtattgagtgacaatgatcccagactggaagttaaattgactgaatcattattctctaag tacaaggggaatgtaaatacggaacccactgaaaatatgcttgtggctgtagaccattat gcagggcaactattatcactagatatccccacttctgaacttacactaaaagaagcatta tatggagtagatggactagaacctatagatattacaaccagtgcaggatttccctatgtg agtcttgggatcaaaaagagagacattctgaataaagagacccaggacacagaaaagatg aagttttatctagacaagtatggcattgacttgcctctagttacatatattaaggatgaa ttaagaagtgttgacaaagtccgattagggaaaagtagattaattgaagcctccagtttg aatgattctgttaacatgagaatgaaactaggcaacctttacaaagcattccatcaaaat cccggtgttctgactggatcagcagtgggttgtgatcctgatgtgttttggtctgtcatc ccttgcttaatggatgggcacctgatggcatttgattactctaattttgatgcctctttg tcaccagtttggtttgtctgtctagagaaggttttgaccaagttaggctttgcaggctct tcattaattcaatcaatttgtaatacccatcatatctttagggatgaaatatatgtggtt gaaggtggcatgccctcagggtgttcaggaaccagcatattcaattccatgatcaacaac ataatcattaggactttgatattagatgcatataaaggaatagatttagacaaacttaaa atcttagcttacggtgatgatttgattgtttcttatccttatgaactggatccacaagtg ttggcaactcttggtaaaaattatggactaaccatcacacccccagacaaatctgaaact tttacaaaaatgacatgggaaaacttgacatttttaaagagatacttcaagcctgatcaa caatttccctttttggttcacccagttatgcccatgaaagatatacatgagtcaatcaga tggacaaaggatcctaaaaacacacaggatcacgtccgatcattatgcatgttagcatgg cactcaggagaaaaagagtacaatgaattcattcagaagatcagaactactgacattgga aaatgtctaattctcccagaatacagcgtacttaggaggcgctggttggacctcttttag

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