Viruses: 1482925
Help
Entry
1482925 CDS
T40000
Symbol
Cap, AavAV865gp2
Name
(RefSeq) Avian adeno-associated virus ATCC VR-865; capsid protein
KO
K19252
Dependoparvovirus capsid protein VP1/VP2/VP3
Virus
219704
Avian adeno-associated virus ATCC VR-865
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
VP1_2
Phospholip_A2_4
Motif
Other DBs
NCBI-GeneID:
1482925
NCBI-ProteinID:
NP_852781
RS:
NC_004828
UniProt:
A0ACD6B585
Q7TG43
Structure
PDB
PDBj
LinkDB
All DBs
Position
NC_004828:2250..4481
Genome browser
AA seq
743 aa
AA seq
DB search
MSLISDAIPDWLERLVKKGVNAAADFYHLESGPPRPKANQQTQESLEKDDSRGLVFPGYN
YLGPFNGLDKGEPVNEADAAALEHDKAYDLEIKDGHNPYFEYNEADRRFQERLKDDTSFG
GNLGKAIFQAKKRVLEPFGLVEDSKTAPTGDKRKGEDEPRLPDTSSQTPKKNKKPRKERP
SGGAEDPGEGTSSNAGAAAPASSVGSSIMAEGGGGPVGDAGQGADGVGNSSGNWHCDSQW
LENGVVTRTTRTWVLPSYNNHLYKRIQGPSGGDNNNKFFGFSTPWGYFDYNRFHCHFSPR
DWQRLINNNWGIRPKAMRFRLFNIQVKEVTVQDFNTTIGNNLTSTVQVFADKDYQLPYVL
GSATEGTFPPFPADIYTIPQYGYCTLNYNNEAVDRSAFYCLDYFPSDMLRTGNNFEFTYT
FEDVPFHSMFAHNQTLDRLMNPLVDQYLWAFSSVSQAGSSGRALHYSRATKTNMAAQYRN
WLPGPFFRDQQIFTGASNITKNNVFSVWEKGKQWELDNRTNLMQPGPAAATTFSGEPDRQ
AMQNTLAFSRTVYDQTTATTDRNQILITNEDEIRPTNSVGIDAWGAVPTNNQSIVTPGTR
AAVNNQGALPGMVWQNRDIYPTGTHLAKIPDTDNHFHPSPLIGRFGCKHPPPQIFIKNTP
VPANPSETFQTAKVASFINQYSTGQCTVEIFWELKKETSKRWNPEIQFTSNFGNAADIQF
AVSDTGSYSEPRPIGTRYLTKPL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcatttctgatgcgattccagattggttggagcggttggtcaaaaagggagtg
aatgctgcagctgatttctaccatttggaaagcggtcctcctcgtcctaaggcaaatcag
caaactcaagaatctcttgaaaaggacgattcgagaggtctcgtgttcccaggctacaat
tatctaggccctttcaacggtctagataaaggagaacccgtcaacgaggcagacgctgcc
gccttagaacacgacaaggcttacgacctcgaaatcaaggacgggcacaacccgtacttt
gagtacaacgaggccgacagacgtttccaggaacgtctcaaagacgatacctcctttgga
ggcaatttaggtaaagccatcttccaggccaaaaagagggttctcgaaccctttggtctg
gtggaagactcaaagacggctccgaccggagacaagcggaaaggcgaagacgaacctcgt
ttgcccgacacttcttcacagactcccaagaaaaacaagaagcctcgcaaggaaagacct
tccggcggggcagaagatccgggcgaaggcacctcttccaacgctggagcagcagcaccc
gcctctagtgtgggatcatctatcatggctgaaggaggtggcggcccagtgggcgatgca
ggccagggtgccgatggagtgggcaattcctccggaaattggcattgcgattcccaatgg
ctggaaaacggagtcgtcactcgaaccacccgaacctgggtcttgcccagctacaacaac
cacctgtacaaacgaatccaaggacccagcggaggcgacaacaacaacaaattctttgga
ttcagcaccccctggggatactttgactacaatcgattccactgccacttttccccgcga
gactggcaacgactcatcaacaacaactggggcatccgtcccaaagcgatgcgctttaga
ctctttaacatccaggttaaagaggtcacggtccaagacttcaacaccaccatcggcaac
aacctcaccagtacggtccaggtctttgcggacaaggactaccaactgccgtacgtcctc
ggatcggctaccgaaggcaccttcccgccgttcccagcggatatctacacgatcccgcag
tacgggtactgcacgctaaactacaacaacgaggcggtggatcgttcggccttctactgt
ctggactactttccctcagacatgctgcggacaggaaataactttgagtttacttacacc
ttcgaggacgttcctttccatagcatgtttgcccacaaccagacgctagaccggctgatg
aatcccctcgtggatcagtacctctgggctttcagctccgtcagccaagcaggctcatct
ggacgagctcttcattactcgcgggcgactaaaaccaacatggcggctcaatataggaac
tggttacctgggcctttcttccgtgatcagcaaatctttacgggcgctagcaacatcact
aaaaataacgtctttagcgtttgggaaaaaggcaagcaatgggaactcgacaatcggacc
aacctaatgcagcccggtcctgcggcagcgaccacctttagcggagaacctgaccgtcaa
gccatgcaaaacacgctggcttttagcaggaccgtctacgatcaaacgaccgccacgacc
gatcgtaaccagatactcatcaccaacgaagacgaaatcagacccaccaactcggtcggt
atcgacgcgtggggagcagttcccaccaacaaccagtcgatcgtgacccccggcactcgc
gcggccgtcaacaatcaaggggcgcttcccgggatggtgtggcaaaacagagacatttac
cctacagggacccatttggccaaaattcccgacactgacaatcacttccatccgtccccg
cttattgggcggtttggctgcaagcatccccctccccagattttcattaaaaacacaccc
gtccctgccaacccttcggaaacgttccagacggccaaagtggcctccttcatcaaccag
tactcgaccggacagtgcaccgtcgaaatcttttgggaactcaagaaggaaacctccaag
cgctggaaccccgaaatccagttcacctccaactttggcaacgcggccgacatccagttt
gccgtctccgacacgggatcctattccgaacctcgtcccatcggtacccgttaccttacc
aaacctctgtaa
DBGET
integrated database retrieval system
