Viruses: 1486911 Help Entry 1486911           CDS       T40000                                  Symbol SFV_s068R Name (RefSeq) Rabbit fibroma virus; gp068R   KO K25273   Poxviridae DNA-directed RNA polymerase 147 kDa subunit [EC:2.7.7.6] Virus 10271  Rabbit fibroma virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RsgA_N CSTF2_hinge Motif Other DBs NCBI-GeneID:  1486911 NCBI-ProteinID:  NP_051957 RS:  NC_001266 UniProt:  Q9Q903 LinkDB All DBs Position NC_001266:61416..65276 Genome browser AA seq 1286 aa AA seqDB search MAVISKVTYSLYNQEEINATDIFINHVKNDDDVGTVKDGRLGAMDGALCKTCEKTELQCF GHWGKVRLYETHIVKPEYISEVIRIVNHICIRCGFLRSREPYLEDVTKMSSHALKKLKDK ILSKKKSCWNSKCMQPYQKITFSKKKVCFVNKSDEVIVPNALIYQKITSIYRRFWPLLEI HQKPENLFYKNFFPVPPLIIRPAISFWIDSIPKETNELTYLLGMIVKYCNMNADEQVIQK AVIEYDDIKIISNNTTSINLSYITSGKNNMIRSYIVARRKDQTARSVIGPDTFITINEVG VPAYIRNTLTEKIFVNPFTLKTVQKLFTDNHIKFYFNKRLNQLTRIKQGKFIKNKIHMLS GDWVEVALKENTSIIFGRQPSLHRYNVIASTVKYTEGDTIKIPPGIANSQNADFDGDEEW MILEQNPKAVIEQSILMYPTTLLKHDIHGAPVYGSIQDEIVAAYSLFRMDDLTLDEVMNL LGKYGIEFNARGKTKFSGKDIYTFLIGEKVNYPGILKDGTVIAPNISSDFVVAMRHMSLA GLIADYTSNVEGVNFIIKSSYVFKRYLEIYGFGVTFKELRPSSDFTNKLEAVNTEKIELI KDAYDRYLRDVLEGKILPLSKSMEADAIESSLSNLTNLNIKEIEEYMKKTLQDNPDNNLL KMAKAGYKVNPTELMYILGTYGQQRIDGEPVETKVMGRVLPYYLPDSKDPEGRGYILNSL TQGLTGSQYYFSMLVARSQSTDIVCETSRTGTLARKIIKKMEDMVVDGYGQVTYGNVLIK YAANYTKISASVCKPIELLYPHESMVWYLEISAIWERLKHGFIYSQKQKITKKILSPFNF LVFIEETDEVNAIGDKDLFNMIQEVIEHVRENYFFNVSNIDFIEYVFLTHLNPSRVKISK LTATNIFKKFYDKLNYSLGGGTPIGIISAQVLSEKFTQQALSSFHTTEKSGAIKHKLGFN EFNNLTNLSKNKTEIITLISEDIEKLQSVKINFEFVCLGELNPCITLTRNEDGIHSVDIV INRLYIKRAELTELVVEYIIERFVAFSVLVKEWGMETNILDEHRIQFTIRVRFVEPMELS LNKFMMVFPGAANKGKISKFKIPINEYDYYEDFNKTKKMYKMTVELMNLKELGTFDLENV NIYPGIWNTYDIFGIEAAKGYLCEALLNTYGEGFDYLYQPCDLLSSLLCISYEPESVNKF KFGSVSALKKATFGDNKALLNAALHKKSEFVNDNSSCHFFSKVPRIGTGYYKYFINLELL MRLEKKLTSKISKQKVEELSELSEDF NT seq 3861 nt NT seq  +upstreamnt  +downstreamnt atggctgtaatttctaaagttacatacagtttatacaatcaagaggagattaacgcaacc gatatatttatcaaccatgtaaaaaacgacgacgacgtaggtaccgtgaaggatggacga ctcggtgccatggacggtgccttatgcaaaacgtgcgagaaaacggagcttcaatgtttt ggtcactggggcaaggtacgattgtatgagacgcatatcgttaaaccggagtatataagc gaagttatccgaattgtaaaccacatatgtatacggtgcggttttttacgatcgagggaa ccttatttagaagacgttacaaaaatgtcgtctcatgcgcttaagaagttaaaagataaa atactgtccaagaaaaagtcttgttggaacagtaagtgtatgcaaccgtatcagaagatt acgttttccaaaaaaaaagtgtgttttgtaaacaaatcggacgaggtcatcgttccgaac gcattaatctatcagaagattacatctatatacagacggttttggccgttgttagaaata catcaaaaaccggaaaatctattttataagaatttttttccggtgcctccattaatcatc cgtccggccattagtttctggatcgatagtattcctaaagagacgaacgaactaacgtat ttgttaggaatgattgtcaaatactgtaatatgaacgcagacgaacaggtaattcaaaag gcggttatagagtacgacgatatcaaaattatttctaataatacgacgagtatcaatctg tcttacattacatcgggtaaaaacaacatgattcggagctatatcgtggctagacgaaag gatcaaaccgccagatccgttataggaccggatacctttattacgattaacgaagtaggt gttccggcgtacatacgaaacactcttacggaaaagatcttcgtaaatcccttcacgtta aaaaccgtacaaaagctattcactgataaccatattaagttctatttcaacaagcgtttg aatcaacttacccggataaaacagggaaagttcattaaaaacaaaatccatatgctctcg ggggattgggtagaagtcgcgttaaaggaaaacacgagtattatattcggtcgacaaccg tctttacatcgatataacgtaattgcatctactgtaaaatatacggagggagacacgata aaaatacctcccgggatcgccaattctcaaaacgcggattttgacggagacgaagaatgg atgatcctggaacaaaaccccaaggctgtcatagaacagagtatcctgatgtatcccacg acgttgctcaaacacgacattcacggagctcccgtgtacggatccatacaagacgaaatc gttgcggcgtattcgttgttcagaatggatgatcttaccctggacgaagtaatgaatcta ttggggaagtacgggatagagttcaatgcgcgagggaagaccaagttctctggcaaagac atctacacgtttttgataggtgaaaaagtgaattaccccggtatattaaaggacggtact gtaatagctcccaatataagcagtgatttcgtcgtcgcgatgcgacacatgtcattggcc ggactcatagcggattacacatcgaacgttgaaggtgtgaattttattataaaatcgtcg tacgtgtttaaacgttatttggaaatctatggattcggagtgacgtttaaagaacttcga cccagttcggatttcacaaataaattggaagccgtaaacacggaaaagatagaactcatc aaagacgcgtacgacaggtatctgcgtgacgtgttggagggtaaaatattacccctttca aaatccatggaggcagatgcaatagagtcgtcgttgtccaatctgacgaatctcaacatc aaagaaatcgaagagtatatgaagaaaacgctacaggataatccagacaacaatctactg aaaatggcaaaggcgggatataaagtaaaccccacggaactgatgtatattctgggaacg tacggacaacaacgtatcgacggtgaaccggtggagacgaaggtgatgggtcgcgtgttg ccttattacttacccgactccaaggatcccgaaggtagaggatacattttgaactcatta acacagggactgacgggatctcagtactacttttccatgttggtagccagatctcaatcc acggacatcgtatgtgaaacgtctagaactggaacattggctagaaaaatcataaagaag atggaggatatggtcgtcgacggatacggacaggttacgtacgggaatgtgttaatcaaa tacgcggcaaactatacaaaaatatcagcgtccgtgtgtaaacccatcgagttgctatac ccccacgagtctatggtatggtacttagaaataagtgcaatctgggaacgtctgaaacat gggtttatttattcacagaaacagaaaataacgaagaagattctatcaccgtttaacttt ttggtgtttatcgaagaaacggacgaggtaaacgcgataggggataaggacctgtttaat atgatacaggaagtcatagaacatgttagggaaaattacttctttaatgtatctaatata gattttatagaatacgtatttttaacgcatctaaacccctctagagtaaaaatatccaaa ttaacggcgacgaatattttcaaaaagttttacgataaattaaactactcgttgggagga ggtacaccaataggcattatctccgctcaagtactgtccgagaagtttacccaacaggca ttgtctagtttccatactacagaaaagagcggggctattaaacacaaactcggatttaac gagtttaataatctaaccaacctgagtaaaaacaaaacagagatcattacccttatttct gaagatatcgaaaaactacagagcgtaaaaatcaatttcgaatttgtgtgtttgggtgaa ttaaatccctgtattacgttaacacggaacgaggacggtatacactccgtggatatagtc ataaatagattgtatataaaacgagcggagcttacagaactcgtcgtggagtatatcata gaacgttttgtggcatttagtgtactggtgaaggaatggggtatggagacgaacatactg gacgaacatcgtatacaatttactattcgtgtccgatttgtggaacctatggaactatcg ctaaacaagtttatgatggtgtttccgggagctgccaacaaggggaagatcagtaagttt aaaatacccattaatgagtacgattattatgaggactttaacaagaccaaaaagatgtat aaaatgaccgtcgaactcatgaacttaaaagaactcggtacgttcgatttggaaaatgtg aacatatatcccggaatatggaacacgtacgatatcttcggtatagaggcggcaaaagga tatctatgcgaagctctcctaaacacgtacggagagggattcgattacctgtatcaaccg tgtgatctactatctagtttattatgtattagttacgaaccggaatctgtgaataagttt aagtttggttccgtgagtgctcttaaaaaagccacattcggggataataaggcgttgttg aatgcagctcttcataaaaagtctgagtttgtaaacgataacagcagttgtcactttttc agcaaggttccacgaataggaactgggtactacaagtactttataaacttagaattactc atgcgtttagaaaagaaattgacttcaaaaatttctaaacagaaagtagaagaattgtcg gagttatctgaagatttttaa

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