Viruses: 1487346
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Entry
1487346 CDS
T40000
Symbol
UL6, HHV2p70
Name
(RefSeq) Human alphaherpesvirus 2; capsid portal protein
KO
K26020
Herpesviridae portal protein
Virus
10310
Human alphaherpesvirus 2
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_UL6
Motif
Other DBs
NCBI-GeneID:
1487346
NCBI-ProteinID:
YP_009137157
RS:
NC_001798
UniProt:
G9I227
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All DBs
Position
NC_001798:15286..17322
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AA seq
678 aa
AA seq
DB search
MAAQRARAPAMRTRGGDAALCAPEDGWVKVHPTPGTMLFREILLGQMGYTEGQGVYNVVR
SSEAATRQLQAAIFHALLNATTYRDLEEDWRRHVVARGLQPQRLVRRYRNAREGDIAGVA
ERVFDTWRCTLRTTLLDFAHGVVDCFAPGGPSGPTSFPKYIDWLTCLGLVPILRKTREGE
ATQRLGAFLRQHTLPRQLATVAGAAERAGPGLLDLAVAFDSTRMAEYDRVHIYYNHRRGE
WLVRDPVSGQRGECLVLCPPLWTGDRLVFDSPVQRLCPEIVACHALREHAHICRLRNTAS
VKVLLGRKSDSERGVAGAARVVNKALGEDDETKAGSAASRLVRLIINMKGMRHVGDINDT
VRAYLDEAGGHLIDTPAVDHTLPGFGKGGTGRGSAPQDPGARPQQLRQAFQTAVVNNING
MLEGYINNLFGTIERLRETNAGLATQLQARDRELRRAQAGALEREQRAADRAAGGGAGRP
AEADLLRADYDIIDVSKSMDDDTYVANSFQHQYIPAYGQDLERLSRLWEHELVRCFKILR
HRNNQGQETSISYSSGAIASFVAPYFEYVLRAPRAGALITGSDVILGEEELWEAVFKKTR
LQTYLTDVAALFVADVQHAALPRPPSPTPADFRASASPRGGSRSRTRTRSRSPGRTPRGA
PDQGWGVERRDGRPHARR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacagcgcgcgcgggcgccggcgatgcggacgcggggcggcgacgcggcgcta
tgcgcccccgaggacggctgggtgaaggttcaccccacccccgggacgatgttgttccgc
gagattctcctcgggcagatggggtacaccgagggtcagggggtgtacaacgtcgtccgg
tccagcgaggccgccacccgacagctgcaggcggcgatcttccacgcgctcctcaacgcc
acgacgtaccgggacctggaggaggactggcgccgccacgtggtggcccgcggcctccag
ccgcagcggctggttcgcaggtaccggaacgcccgggagggcgatatcgccggggtggcc
gagcgggtgttcgacacgtggcgatgcacgctcaggacgacgctgctggactttgcccac
ggggtggtagactgctttgcgccgggcggcccaagcggaccgaccagcttccccaaatat
atcgactggctgacgtgtctggggctggttcccatattgcgcaagacgcgcgagggggag
gcgacgcagcgcctgggggcgtttctcaggcagcacacgctgccccggcagctggccacg
gtcgccggggccgcggagcgcgccggcccggggcttctggatctggccgtcgcgttcgac
tccacgcgcatggcggaatacgaccgcgtgcacatctactacaaccatcgccggggggag
tggctggtgcgcgacccggtcagcgggcagcgcggcgagtgcctggtgctgtgccccccc
ctgtggaccggcgaccgcctggtcttcgattcgcccgttcagcggctgtgccccgagatc
gtcgcgtgccacgccctccgggaacacgcgcacatctgccgtctgcgcaacaccgcgtcc
gtcaaggtgctgttggggcgcaagagcgacagcgagcgcggggtggctggcgccgcgcgg
gtcgtcaataaggcgctgggggaggatgacgagacgaaggccggctcggccgcctcgcgt
ctcgtgcggctcatcatcaacatgaagggcatgcgccacgtgggcgacatcaacgacacg
gtacgcgcctacttggacgaggcgggggggcacctgatcgacacccccgccgtcgaccac
accctccctgggttcggcaagggcggcaccggccgcgggtcggcgccccaggacccgggg
gcgcgaccgcagcagcttcgccaggcgtttcagacggccgtggtcaacaacatcaacggc
atgctggagggctatatcaataatctctttggaaccatagaacgcctgcgagagacgaac
gcgggtctggcgacccagctgcaggcgcgcgaccgcgagctgcggcgcgcccaggcgggg
gcgctggagcgggagcagcgcgcggcggaccgggcggccgggggaggcgcgggccgcccg
gcggaggcggatcttctccgggccgactacgacattatcgacgtcagcaagtccatggac
gacgacacgtacgtggccaacagtttccagcaccagtacatccccgcgtacggccaggac
ctcgagcgcctgtcgcgcctctgggagcacgagctggtgcgctgcttcaagattctgcgc
caccgcaacaaccagggccaggaaacgtcgatctcgtactctagcggggcgatcgcctcc
ttcgtggccccgtatttcgagtacgtgcttcgcgccccccgagcgggcgcgctcatcacc
ggctccgatgtcatcctaggggaggaggagttatgggaggcggtctttaagaaaacccgc
ctgcagacgtacctgacagacgtcgcggccctgttcgtggcggacgtacagcacgcggct
ctgccccggcccccctccccaacccccgccgatttccgggcgagcgcgtccccgcggggc
gggtcccggtcccggacccggacccgatcccggtcgcccgggagaacgccgaggggtgcg
ccggaccagggctggggcgtcgaacgcagggatggccgaccccacgcccgccgatga
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