Viruses: 1487609
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Entry
1487609 CDS
T40000
Symbol
ORF42, EhV4gp43
Name
(RefSeq) Equid alphaherpesvirus 4; major capsid protein
KO
K26014
Herpesviridae major capsid protein
Virus
10331
Equid alphaherpesvirus 4
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_MCP
Motif
Other DBs
NCBI-GeneID:
1487609
NCBI-ProteinID:
NP_045260
RS:
NC_001844
UniProt:
O39283
LinkDB
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Position
NC_001844:77301..81428
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AA seq
1375 aa
AA seq
DB search
MDRRSEAFKIPVPEVIHAGQILSTIEVSSHRTLFDFFKQIRSDDNGLYAAQFDVLLGTYC
NTLTLVRFLELGLSVSCVCTKFPELNYVNDGTIQFEVQQPMIARDGPHPVDQPTHTYMMK
HIEQRSLSAAFAIAAEALGLIGGTSLDGTQISSSLRVRAIQQLARNVQTVLDSFERGTAD
QLLRVLLEKAPPLTLLAPLQIYRDEGRLASRVNRAVLVSELKRRVIEDTFFLTKHERNRK
ELVVSRLAELVNCTAPSVAVTRMTHSDTKGRPVDGVIVTTAGVRQRLLQGILTLEDMAAD
VPVTYGEMMISGTNLVTALVMGKAVRNLDDVAHHLLGMQRDQVRSNERMIKDYEDVPSMA
RVRADLVSVGDRLVFLESLEKRVYQATNVPYPLVGNLDLTFIMPLGIFKPATDRYSRHAG
SFTPTPGQPDPRTYPPQTVYFFNKDGNLVQISFDSAAGTVCHSSFLDVDAVLVAIRRDPH
ELHCAFGAYVTLPPAGSLLDQMRRFFERWHLLMPARPRWTAEALMSIDQLLSPCNANLRL
ELHPAFDFFVAPADVALPGPFDMPNVMPTVVAMPRLINGNIPLPLCPVEFRDSRGFELSV
DRHRLNPATVLAVRGTFRDANYPMVFYILEAVIHGSERTFCALARLIMQCIVSYWRNTHQ
VAFVNNFYMLMYINAYLGNGELPEECTAIYRDLLEHVQALRRLVVEYTVPGEAVGGQGHD
ALNNVLLDPALLPPLIWDCDPILHRADMGRARAQDLWVDGVDYAAIPWVEMAEVDFRNTG
GRLVHNRPIRGENKRNPIVPHHDPEWSVLSKIYYYAVVPAFSRGNCCTMGIRYDRVYPLV
QTVVIPDLGAEEIAPTSPSDPRHPLNPRHLVPNTLNILFHNARVAVDADALLLLQEVVTN
MAERTTPILATTAPDAGTSTAVTQEMRTFDGTLHHGILMMAYQRNDETLLEGTFFYPAPV
NALFACPDHLGALPGLNAEVLEAARDVPPVPHFFGGNYYATVRQPVAQHAIQSRVDENTL
TYSLMAGYFKLGPIALSHQFATGFHPGIAFTVVRQDRFLTENILFAEKASESYFMGQLQV
NRHEAVGGVNFVLTQPRANVDLGVGFTAAYEPRAATPVTDMGNLPQNLYLTRGTIPMLDG
DADAYLRRVVNTGNRLGPQGPRPIFGQLMPATPAGVAHGQAAVCEFIVTPVSADLNYFRR
PCNPRGRSAGPVYACDGEADAVDVMYDHTQGDPAYPNRATVNPWASQRNSYGDRLYNGKY
NMNGASPVYSPCFKFFTPTEVDAKGRNMTQLIADVGASVAPSTSNTEIQFKRPHGSSDLV
EDPCSLFQEAYPLLSSTDTALLRTPHVGEIGADEGHFAQYLIRDESPLKGCFPRI
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggaccggcgctctgaagcgtttaaaattccggttccagaagtaatccatgccgggcaa
attttatcaactatagaggtgtcatcacaccgcacgctgtttgacttttttaagcagatt
cgctctgacgacaatggcttatacgcagcgcagtttgacgtgctacttggaacatattgc
aacacgttaacactggtgcggtttttggagctcggattatccgtatcgtgtgtgtgtact
aagttcccagagcttaattacgttaacgatggcacaattcaatttgaagtacaacagcca
atgatagctcgggatggtccccacccagtggatcagcctacccacacctacatgatgaag
cacatagagcagcgatccttgagcgcggcttttgctattgcagctgaggctttgggtctg
ataggaggcacttccctcgatggaactcagatctcgtcgtcgctgcgggtgagagctata
caacagcttgctagaaatgtgcaaacagtgttggactcttttgaacgaggcactgccgac
cagcttttgcgcgttttgctggagaaggctccaccgcttacacttttggctcctctgcaa
atttaccgagacgagggccgcctggcgtctcgggtaaatcgcgccgttctcgtttcggag
ctcaaacggcgggtaatagaagatactttttttttaactaagcacgagcgtaacagaaag
gagctggtggtatcccgcctggctgagctggtaaattgtacagctccttctgttgcggtt
acgcgaatgacccactcagacacaaagggaagaccagtggatggtgtaattgtcactact
gctggtgtgcgccagcgcttattacagggcatcctaaccctggaggatatggccgcggac
gttccggtaacgtatggcgagatgatgatcagcggcacgaacctggttacagcgctagtg
atgggaaaggccgtgagaaacttagacgacgtggcccatcacttgttgggaatgcagcgc
gatcaggttaggtctaatgagcgcatgattaaagactacgaagacgtacccagcatggca
cgggtgcgtgccgacctagttagtgtgggagaccgtttagtttttttggagtccttggaa
aagcgcgtgtatcaggcgacaaacgttccgtaccctttggttggaaatttagacttgaca
tttatcatgccacttggaatcttcaaacctgccacagacaggtactcgcgccacgcagga
agcttcacgccaaccccaggacagccagatccccgaacctacccaccccagaccgtgtac
ttctttaacaaagatggaaatttggtacagatttcttttgatagcgccgctggaacggtg
tgccacagctcgtttttggacgtagatgctgtgctggtggccatcaggagggaccctcac
gagctccactgtgcatttggggcttacgtaaccctaccccccgcaggcagcttgctcgac
cagatgagacggttttttgagcgatggcatctgctgatgccagcgcgcccgcgttggacc
gccgaggcgctaatgtcaatagatcagcttctctccccctgcaacgcaaacttacgccta
gagcttcacccagcatttgatttttttgtggcccccgcagatgtggcacttccaggccca
tttgacatgccaaacgtcatgcccacagtggtggcaatgcctcgtcttatcaacggaaac
attccacttcccctctgccccgtggaatttcgtgacagtcgcggctttgagcttagcgta
gacagacacaggctaaacccggctacggttttggcggtacgtggcacattcagagacgcc
aattaccctatggtgttttacattctcgaggccgttattcatggcagcgaacgcacattt
tgtgctttggccagactcataatgcagtgcatcgtcagctattggcgcaacacccaccag
gtggcgtttgttaacaacttttacatgctcatgtacattaacgcttacctcggaaatggc
gaactgccagaagagtgtacggctatttaccgcgacctcctggagcatgtgcaggctctc
agaagacttgtagttgagtatacagttccaggggaagcagtgggtggacagggacacgac
gcgctaaacaacgtcctgctcgatccagctttacttccacccctgatttgggactgtgac
cctatcttgcacagggctgatatgggccgagctcgggcacaggatctatgggtggatggg
gtagactatgcagcaattccttgggtggagatggccgaagtagactttagaaacacaggc
gggcgcttggtccacaaccgacccatacgcggggaaaacaagagaaacccaatcgttcct
catcacgacccagaatggtcagtattatcgaagatatactactacgcagtggtgcctgca
ttttcacgcggaaactgctgtaccatgggaatccgatatgaccgcgtatacccgcttgtt
cagaccgttgttattcctgaccttggggcagaagaaattgcccccaccagccccagcgac
ccgcgccacccgctcaatccgcgccacttagttccaaacacgctaaacatattatttcac
aacgccagagtagcagtggacgccgacgccctgcttcttcttcaggaggtggtcactaac
atggcagagcgcacaactcccatattggctacaaccgctccggacgcaggaacgtctacc
gcagtaacacaagagatgcgcacttttgatggaaccctccatcacggcattttaatgatg
gcttaccagcgcaacgacgaaacgcttttagagggtaccttcttttaccccgccccagtc
aatgctctttttgcctgcccagatcacctaggggcattaccgggtcttaatgcagaagta
ttggaagccgccagagacgtgcctccagttcctcacttttttggagggaattactacgcg
acggttagacaacctgtggcgcagcacgccatacagagccgcgtggatgagaacacgcta
acatattcgcttatggctgggtacttcaaactgggtcccatagccctatcccatcaattt
gccactgggtttcacccagggattgcatttaccgttgtacggcaagacaggttccttacg
gaaaacatcctctttgcggagaaggcgtcagagtcatactttatgggccagctacaggtt
aaccgccacgaggctgttgggggggttaactttgtactaactcaaccgcgagccaacgtt
gacctgggagtggggtttacagctgcttacgagccgcgcgctgccactcccgtaacagac
atgggaaatttgcctcagaatctgtatctaaccagaggtacgatcccaatgcttgacgga
gacgcagacgcgtatttgcggcgggttgttaacaccggaaaccgcctaggaccccaaggt
ccccgccctatctttggtcagctgatgccagctacacctgcgggcgtagctcacggtcaa
gcggcggtatgtgaatttatcgttacaccggtgtcggcagaccttaattattttaggcga
ccctgcaaccccagagggaggagcgctggacctgtatatgcctgtgacggtgaggccgat
gccgtggatgttatgtacgaccacacacagggtgatcccgcttaccccaaccgtgctacc
gttaacccttgggcttctcagcgaaactcatatggtgacagattgtataacggcaagtat
aacatgaacggggcatctcctgtgtacagtccctgtttcaagtttttcacgcctacagaa
gtagacgccaaggggcgtaatatgacacagctaatagccgacgtgggtgctagtgtggcc
ccgagtacgtccaacacagaaatccagtttaaacgcccccatggatcgtcagacttggtg
gaagacccatgttcgttgtttcaagaagcgtatcctctactcagctccactgatacagca
ttgctacgcacgcctcacgttggcgaaattggcgcagatgaaggacattttgcccagtac
ctaattcgcgacgaatcccccctgaaaggctgttttccacgaatttag
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