Viruses: 1487676
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Entry
1487676 CDS
T40000
Symbol
ORF6, HHV3_gp07
Name
(RefSeq) Human alphaherpesvirus 3; helicase-primase primase subunit
Virus
10335
Human alphaherpesvirus 3
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_UL52
Motif
Other DBs
NCBI-GeneID:
1487676
NCBI-ProteinID:
NP_040129
RS:
NC_001348
UniProt:
Q6QCQ0
LinkDB
All DBs
Position
NC_001348:complement(5326..8577)
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AA seq
1083 aa
AA seq
DB search
MDKSSKPTIRLLFATKGCAISHSLLLLTGQISTEPLYVVSYTWTPDLDDVFVKNGREEIT
QVIPTKRPREVTENDEENQIMHLFCSRDVNVIFYLIGGFSTGDVRSRVWPIFFCCFKTQT
DFKALYKALWYGAPLNPHIISDTLCISETFDIHSEVIQTLMVTTHHLNRKGLSDNGLCIT
EATLCKLVKKSVGRQELTSLYAHYERQVLAAYRRLYWGYGCSPFWYIVRFGPSEKTLVLA
TRYYLLQTDTSYNTLETPLYDLQAIKDLFLTYQVPALPNCSGYNISDLLSFDKLSMFCCS
STYTRGLTAKNALSYILQRIHTDTTEIHAVSEYITNDRKGLKVPDREFVDYIYLAHFECF
NRKQIADHLQAVTYSDFVNKPVLLKSSNLGKRATANFFNHVRSRLNMRDYIKKNVICDVT
ELGPEIGHKYTITKTYTLSLTYAAKPSKFIGVCDLATTLTRRVENIEKQFSPYGWSSTIP
SNPPGFDELSNFEDSGVSAEALRAANFANDTPNQSGRTGFDTSPGITKLLLFFSAATGIA
THDVSILSYKTPLEALIGHSEVTGPMPVYRVALPHGAQAFAVIANDTWSSITNRYTLPHE
ARLIAEDLKQINPCNFVAASLRDMQLTLLLSTSVKNVSKISSNIPKDQLYINRNELFNTN
LIITNLILDVDFHIRKPIPLGILHAGMRAFRHGILTAMQLLFPKAVVNPNKDPCYFYKTA
CPEPTVEVLDDDNLLDITSHSDIDFYIENGELYTCVEENYTEDVWFFDTQTTSEVHTHAD
VSNNENLHETLPCNCKEKIGFRVCVPIPNPYALVGSSTLKGFAQILQQAVLLEREFVEYI
GPYLRDFSFIDTGVYSHGHSLRLPFFSKVTTTGTAVGQLLPFYVVPEQCIDILAFVTSHR
NPANFHFHSRPQSNVPVQFILHNLGGEYAEFFERKVARNKQIFSSPQISLTKALKERGVT
CLDAFTLEAFVDSTILESIVEHIAVHFPGRDREYTLTSSKCIAIKRDWVLFQLICGTKGF
TCLRYPHRGGRTAPRTFVSLRVDHHNRLCISLAQQCFATKCDSNRMHTIFTLEVPNYPNL
TSS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggataaatcctccaaaccgacgattcggttattatttgccacaaagggatgtgcaatc
tcccactcgctgttgttgcttaccgggcagataagcacagaacctctgtatgtggtgagt
tatacttggactcccgacttagatgacgtctttgtcaaaaatgggagggaagagatcacg
caagtaatcccaactaaacgcccacgtgaagtaactgaaaacgatgaagaaaaccaaata
atgcatttattttgtagtagggacgtcaacgttattttttatttaattggtggattttca
actggagatgtacgatcccgggtctggcctatatttttttgttgttttaaaacccaaact
gattttaaagctttatataaggcgttatggtatggagcacccctaaatccgcatataata
tctgataccctatgtatatcggagacgtttgacattcactcggaagttatacaaactctg
atggtaacaacacaccatttaaaccgaaagggattatcggacaacggcctatgcatcaca
gaggcaacactctgcaagttagttaaaaaatccgttggtcgtcaggagctaacatcatta
tatgcccattacgaacgtcaagtattggctgcatatcgacgactctactgggggtatgga
tgctcgccgttttggtatattgttcgatttggaccctctgaaaaaacgctagtgttggct
acacgctattacttgttacaaacggacacaagttacaatacgttggaaacccccttatat
gacttacaggcaattaaagatttgtttttaacttaccaagtcccggcattacctaattgt
agtgggtacaatatttcggacttgttgtcttttgataaactttccatgttttgttgttcc
tcaacatatacacgaggtttgacagccaaaaatgctctatcgtacattttacagcgaata
catacagacacaacggaaatacacgcagtatcggagtatattaccaacgatagaaaaggc
cttaaagttccagaccgtgaatttgttgattatatttatctggcacattttgaatgtttc
aatcggaaacagatcgcagaccacctacaagcggttacatactcagattttgtgaataaa
ccggtcctcttaaaatcatccaacctgggaaaaagagctactgctaatttttttaatcat
gtacgttctcgtctcaacatgcgtgactatataaaaaagaacgtaatttgtgatgtcact
gaacttggacctgagattggacataaatatacaattactaaaacatatactttaagtctt
acgtatgccgcaaaacctagcaagtttataggcgtatgtgacctagctacaacgctaact
cgtcgtgtggaaaacattgaaaaacaatttagtccatatggatggtcctccactattccc
tcaaatccacccggttttgacgaattgtctaattttgaggattcgggtgtttccgcggag
gcgttacgagcagccaactttgcaaacgatacacctaaccaaagtggtcgtactggtttt
gatacgagcccggggattacaaaactattactgtttttctctgctgccactgggatagcc
acacatgatgtatccatcctgagttataaaactccattagaagccctcatcggccattct
gaggtaactggaccaatgcctgtatatcgggtagccttgcctcacggcgcccaagcattt
gctgttattgctaatgatacgtggtcatcaataacaaaccgttacactttaccgcacgag
gctcgattaattgcggaggaccttaaacaaattaatccatgtaattttgttgccgcttca
ctacgagatatgcagttgactttactattatctacgtctgttaaaaacgtttctaaaatt
tcatcaaacatacccaaagatcagctttatataaacaggaatgagctatttaatacaaat
cttataatcacaaacctcatacttgatgtagactttcatataagaaaacccatcccattg
ggtattttacatgccggcatgcgagcatttcgtcatggtattttaacggccatgcaatta
ctttttccaaaggccgtggtaaaccctaacaaagacccatgttatttttataaaactgca
tgtcctgaacctaccgttgaggtgttggatgatgataatttattggatataaccagccat
tctgacatcgatttttacatagaaaatggcgaattatacacgtgtgtagaagagaattat
acagaggatgtatggttttttgatacacagacaacgtctgaagtccatacacacgccgat
gtatcaaacaatgaaaacttgcatgaaactctaccctgtaactgtaaagagaaaataggt
ttcagggtatgcgtaccaatcccaaatccctatgcgttagtggggtcttccactttaaag
gggtttgcacaaatattacagcaagcggtgttgctggaacgggaatttgttgaatatatt
ggtccgtatttacgggacttttcgtttatagatactggtgtttatagccacggacatagt
ttaagactgccttttttctccaaagtaacaaccacagggacggcggttggacaactactc
ccattttatgttgtacctgagcagtgtattgatatattagcgtttgtgacatcacataga
aacccggcaaactttcattttcattcaagaccgcagtcgaatgttccagtgcaatttatt
ttacataaccttgggggggaatacgcagagttttttgaacgtaaggttgcgcgtaataaa
caaatatttagctccccgcaaatatctttaacaaaggctctaaaagagcgcggggtaact
tgtctggacgcatttacactggaggcctttgtcgacagcacaatattagaatctattgtg
gagcatattgctgttcatttccccgggcgtgatcgcgaatataccttaacatcatcaaag
tgtatcgccatcaaaagggactgggtgttatttcagctcatatgcggaacaaaagggttc
acttgtcttcgatatccccatcgcggaggaagaacggctccccggacatttgtgtctctg
cgagtggatcatcacaaccgtttgtgtatttcgcttgcacaacaatgttttgctacaaag
tgcgatagcaatcgcatgcatacaatctttactctagaagtacctaattatccaaattta
acttcgagttaa
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integrated database retrieval system
