Viruses: 1487966
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Entry
1487966 CDS
T40000
Symbol
U86, HHV6_p23
Name
(RefSeq) Human betaherpesvirus 6A; immediate early protein IE2
Virus
32603
Human betaherpesvirus 6A
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_IE2_3
HHV6-IE
CCDC8
Motif
Other DBs
NCBI-GeneID:
1487966
NCBI-ProteinID:
NP_042979
UniProt:
Q77Z83
Structure
PDB
PDBj
LinkDB
All DBs
Position
NC_001664:complement(join(126041..130146,135826..136019,136108..136166))
Genome browser
AA seq
1452 aa
AA seq
DB search
MEPAKPSGNNMGSNDERMQDYRPDPMMEESIKEILEESLMCDTSFDDLIIPGLESFGLII
PESSNNIESNNVEEGSDGELKTLAEQKCKQGNDNDVIQSAMKLSGLYCDADITHTQPLSD
NTHQDPIYSQESRIFSKTIQDPRIVAQTHRQCTSSASNLQSNESGSTQVRFASELPNQLL
QPMYTSHNQNANLQNNFTSLPYQPYHDPYRDIESSYRESRNTNRGYDYNFRHHPYRPRGG
NGKYNYYNPNSKYQQPYKRCFTRTYNRRGRGHRSYDCSDRSADLPYEHYTYPNYEQQNPD
PRMNNYKDFTQLTNKFNFESYDYSMAFSTDSTHVQSDNYNHPTKAQTIPETTKTKKHEAT
KDNETSTENQVLTPDVISLSYRPSSYKMDIIKKIYDTDVIPLPKEALTANGSNRDVDIQK
YKKAHIRCRSVQKKKERSSQTNKHDENHASSRSDLKERKSNENEDKAVTKARDFSKLNPL
LSPLPLTPEPAIDFADHTDKFYSTPEFNQIQQNLHRSKTSLQDTVPISKHTPRAPTKDNS
YKKHHDSKDNYPKMKHSPGRTTSKKNTTNSNGHQNFKEVSVKNVSGKATSTSPKSKTHHY
SSSSDEEGQYKSPVKTIIQSPSPYCKLKNPSIMDKNSAKNHTASADKNLTDNSPIRSNLN
PTAFNKSNSNKSITNSTSNSDECTDRKPNCNSTKNESKDPNRTCGKNSDKHLSKSCTMAS
KRAPSRASSRASSRDSSRASSRASSRASSRDSSRASSRASSRDSSRASSRASSRASSKAS
SRASSRASSRASSRDSSRASSKASSRASSRDSSRASSRDSSRDSSRASSRASSRDSSRAS
SKASRKASSRASSRASSRASSKASGKASSEASSRASSRNSSRASSRASSRASSRDSSRAS
SRASSRDSSRASSKASRKASSRASSRASSRELRQIYCDSNKRQTPPHDTSINTKFEISEI
KFRCGEDLNFYKNTAARLQCFNHNDQFYNPRFRPHIRTNRKKSESTNDTDSESSMSRCKS
HCRNSPDSLTVVRRKKHKSGSSSISSSIEENCRSNSHIVTGKEKFTPFYYQSSRTRSSSS
SSSSSASLSCSKSTLKTCRKTQYKDNKQIKSKSDSKHKTTNMSSDYESNRHADVFKNSPE
AGEKFPLHNSSPFNTHEQSNHSENAIDEEQKKAPNITTSHLQGKQNVRLHNTKKCKKKRP
RDDDSDSSIKNFCKKRISGAQKTESEVSEPDDLCYRDYVRLKERKVSEKFKIHRGRVATK
DFQKLFRNTMRAFEYKQIPKKPCNEKNLKEAVYDICCNGLSNNAAIIMYFTRSKKVAQII
KIMQKELMIRPNITVSEAFKMNHAPPKYYDKDEIKRFIQLQKQGPQELWDKFENNTTHDL
FTRHSDVKTMIIYAATPIDFVGAVKTCNKYAKDNPKEIVLRVCSIIDGDNPISIYNPISK
EFKSKFSTLSKC
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggagccagcaaaaccctctggaaacaacatgggatccaatgatgaacgtatgcaagac
taccgtcccgatccaatgatggaagaatctatcaaagaaatattggaagagagtctcatg
tgtgatacatccttcgatgacctgattattccaggccttgaaagctttggtcttattata
ccagagtcttccaacaacatagagtccaataatgtagaagaaggatcagatggagagttg
aaaactttagctgaacaaaaatgcaaacaaggaaatgataacgacgtcattcaaagcgcc
atgaaattatccggactatactgtgatgcggacatcacacacacacaaccgttgagtgat
aatacgcatcaagatcctatatattctcaagaatccagaatattttcaaaaactatccag
gatccacggatagtagctcagacccacagacaatgcacatcctctgcttccaatctacaa
tcaaacgaaagcggttcgacccaggtgcgctttgcttcggaactaccgaatcaactccta
cagcccatgtacacgtcacataaccaaaatgcaaatctacagaacaatttcacctcgttg
ccgtatcaaccttatcatgatccatacagagatatagagagttcctacagagaatctaga
aataccaatagaggatatgactataactttagacatcatccgtataggcccagaggagga
aatggaaaatataattactacaatccaaactcaaagtatcaacagccatacaaaagatgt
tttaccagaacttataacagacgcggaagaggccacagatcatacgattgctcagacaga
tccgcggatttaccatatgaacattacacgtatccaaactacgaacaacagaatccagac
ccccgtatgaataactataaagattttacacaactaacaaacaagttcaattttgaatcc
tatgactatagcatggcattctcaacagactccacacacgtacaatccgacaattacaat
catccaacaaaagcacagacaataccagaaactacaaaaactaaaaaacatgaggctact
aaggataacgaaacatccacagaaaatcaagttttaacgcctgacgtaatcagtttatca
tacagacctagttcctacaaaatggatattattaaaaaaatatatgacactgacgttatt
ccgttaccgaaggaagccttaacagccaatggctcaaatcgtgacgtggatattcagaag
tacaaaaaagcacatatccgttgtagatcagtccagaagaaaaaagaacgcagttctcaa
acaaacaaacatgatgaaaaccatgcctcatcacgttctgatcttaaggagagaaaatct
aatgagaatgaagataaagccgttactaaagctagagatttttcaaaattaaatccccta
ttatctcctcttccgttgacacctgaacccgccatagactttgcggaccatacagataaa
ttctattcgacaccagaattcaaccaaatacaacaaaatctacaccgatcaaaaacttct
ctacaagacacagttcccatatcaaaacatactccaagagccccgaccaaagataattct
tacaaaaaacatcatgactccaaagacaattatcctaaaatgaaacattctcctggacgt
acaacatctaaaaaaaatactacaaactccaacggacaccaaaactttaaggaagtatcc
gttaagaatgtttcagggaaagccacatctacatcaccaaaatcaaaaacacaccattat
tccagtagctctgatgaagaaggtcaatacaaatctccggtaaaaactattatccaatca
ccttctccatattgcaagttaaaaaatccttcaattatggacaaaaacagtgctaaaaac
cacactgcaagcgccgacaaaaatttaacagacaattcacctattcggagtaatttaaat
cctactgcttttaacaaatccaacagtaacaaaagcatcacgaatagcacttctaacagt
gatgagtgtactgacaggaaacctaactgcaattccaccaaaaatgaatctaaagatcct
aaccgaacttgtggcaaaaactctgataaacatctgagtaaaagttgcaccatggcttct
aaaagggctcccagcagagcctcaagcagagcctccagcagggattctagcagggcatca
agcagagcctccagcagagcctccagcagggattctagcagagcctccagcagagcctcc
agcagggattctagcagagcctccagtagagcctccagcagggcctcaagcaaagcctcc
agcagagcctccagcagagcctccagcagagcctccagcagggattctagcagggcctca
agcaaagcctccagcagagcctccagcagggattctagcagagcctccagcagggattct
agcagggattctagcagggcctccagcagagcctccagcagggattctagcagggcctca
agtaaagcctcaagaaaagcctccagcagagcctccagcagggcttccagcagggcctca
agcaaagcctccggtaaagcctcaagcgaagcctccagcagagcctccagtaggaattct
agcagggcctcaagcagagcctcaagcagagcctccagcagggattctagcagagcctcc
agcagagcctccagtagggattctagcagggcctcaagtaaagcctcaagaaaagcctcc
agcagagcctccagcagggcttccagcagggagctgaggcagatttattgcgattctaat
aaaagacaaacgcctccacatgacacctcaattaatacaaaatttgaaatatcagaaata
aaatttcgatgtggagaagatctaaatttctacaaaaatactgcagctcgactccagtgc
tttaatcacaatgatcaattttacaacccccgattcagacctcatataagaaccaacaga
aaaaaatcagaatccaccaatgacaccgattcagaaagttctatgtctagatgcaaatct
cactgtcgaaattcaccagattcactgaccgttgtaagaagaaaaaaacacaaatctgga
tcatcaagcatctcttccagtattgaagaaaattgcagatctaattcacatatagtaacc
ggaaaagagaagtttacaccattttactatcagtcttccagaactagatcatcatcatca
tcatcatcatcatcagcttctttatcatgttccaaatccacattaaaaacatgccgcaaa
actcaatataaagacaataaacaaataaaatctaaatcagattcaaaacacaaaactaca
aacatgtcttcagattacgaatcgaatagacatgcagatgtgtttaaaaactccccggaa
gcaggtgaaaaatttcccctacacaattctagtccatttaacacacatgaacaatccaat
cattccgaaaacgccattgatgaagaacaaaaaaaggcacctaatatcacgacttctcac
ctacagggaaaacaaaatgtcagattacacaacacaaaaaaatgcaaaaaaaaacgcccc
cgcgatgatgattcagattccagcataaaaaatttctgcaagaaaagaatatccggagcg
cagaaaacagagtctgaagtaagtgaacctgacgatttgtgttatagagattatgttaga
ctaaaagaaagaaaagtatcagaaaaatttaaaattcaccgcgggagggtggctacaaaa
gattttcaaaaactatttagaaatactatgagagcatttgaatacaaacagatccccaaa
aaaccttgcaatgaaaaaaatctaaaagaagctgtatacgacatctgctgtaatgggctc
tctaacaacgcagccatcattatgtactttacaagatcaaaaaaagtagctcaaatcata
aagataatgcaaaaagaattaatgattcgacccaacatcactgtttcagaggcatttaaa
atgaatcatgcaccgcctaagtattatgacaaagatgaaattaaacgatttatccaacta
caaaaacaaggaccgcaagaattatgggataaatttgaaaacaacacaacacatgatcta
tttacgagacattcggacgtaaagactatgataatttacgccgctacgcccatcgacttt
gtaggagctgttaaaacatgcaataagtatgccaaagataaccctaaagaaattgtcctt
cgggtgtgttcaatcatcgacggtgacaatcctatctccatctataatcctatcagcaaa
gagtttaaatcgaaatttagtacactttcaaaatgttaa
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integrated database retrieval system
