Viruses: 1489557
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Entry
1489557 CDS
T40000
Symbol
ORF_P194, RTBVgp3
Name
(RefSeq) Rice tungro bacilliform virus; hypothetical protein
Virus
10654
Rice tungro bacilliform virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Peptidase_A3B
RVT_1
Caulimovir_coat_dom
RT_RNaseH
RT_RNaseH_2
MP
RVP
zf-CCHC
PolyA_pol
Motif
Other DBs
NCBI-GeneID:
1489557
NCBI-ProteinID:
NP_056762
RS:
NC_001914
UniProt:
P27502
LinkDB
All DBs
Position
NC_001914:994..6021
Genome browser
AA seq
1675 aa
AA seq
DB search
MSLRPFTGTSRTITQDSTSESNIKKGKNSTKRELIEEVDVNQEVENFDWKKLSGIKPNKL
YEKNWQEKVKLKQQSIVSAYKEEAISVTHNAYTTTLFPQEVIKNVKNQGKLYYHIGMMAI
GVKGLHRRKIGTKVMIMFYDDSFGKAREASIGSIEMDMNAGCGVFYSCPDFAKYIKDLSH
LKIGIQTLGYENYEGKNLSVAIKTIGRLTTNIQSKYKINVKDIVEQISSQGIIMVAPMEI
DSSHLDGNEWDLSKFLNHENTSRVPTKALIYQNLQGGESLRFSNYKQTRMHDPTENNSDE
DEDLKILGEQLNIKMARFYTMQTPEEELREVIQQLEREKQAMIAKLEAKMKESSKMAIVE
DNFNPNNEYLEDTYSEYEDLEFEKLGLTGWEDLDQDSIETEEITEWENPNQVLHREIRAY
KSVSEQIEDIFGELLKEHGNYDMALKNLEEKYDLDKIEKAKSIEEIAKSSTSSEIRPTKR
PKEEQTAYEDDMRDDWKRKELTVNPIEASKDRNFERIGSSYKKNFYPSRSEILNLDNVPP
QFYYDQLVTWEGIVKNEWEARKKDGMDMWSWMDGRITGLVLYLVQDWISKNQAAYNDIKS
RGDRPENFVKMVKDRFLIEDPTDERRTALQRLAQRELEALNCEDPTKIQPFMAEYLKKAS
EAKKGFDVVYVERLFDRLPEAVGKVVKADFVKDGNSYEAGIGIAVSYISTWMRAKCIKET
EAKTQKKASLAFCRSIYTIGDYKKRKILKRVTNYNKNRRKNYVRRPSIKKKCRCYICQDE
NHLANRCPRRYTNQARASLIDGLDEDIVSIASDDEDIENFLEIIELDEFIAHSSQEHEHT
WEIGGKKDKVCEICSYFTDYNKTVSCKTCETQYCKTCSDQLALEVTEVKKPTKEETMIDD
LKLNVKNLEFRVTILEHKVEMQNLQDKFETMQIRNKSEITEIPTTSLAMRANESNYIKTS
INKTAGCYVETKISFNNENRIITALIDSGSTHNIICPTLIPASWINNTHREIIMFAVDNS
KYNLNQELIDDIKLQFQEVDETFGIKYKLGQTYVAPKPTKTFIIGHRFLTNENGSVTIHK
DYITIQKTTGIYPTARHELKSEFARKHGGRPPLFSNIPETYNKIPHLHSYQPQPILGYKN
EIGNQSLITMVKELEALGFIGDDITKNRTTWVCDFKIINPDINITCATIPYTPADKEVFE
KQIKELLDNKLIKKADPTCRHRTAAFIVRNHSEEVAQKPRIVYNYKRLNDNMHTDPFNIP
HKISMINLIQKANIFSKFDLKAGFHHMKLKDDFKDWTTFTCSEGLYTWNVCPFGIANAPC
AFQRFMQESFGDLKFALLYIDDILIASNNEKEHIEHLKIFFNRVKEVGCVLSKKKSKMFL
KEVEYLGVEIKEGKISLQPHIVDKIKKFDKNKLNTLKGLQAYLGLLNYARGYIKDLSKLV
GPLYKKTGKNGQRIFNKEDWNIIFKIEREVSKIKPLERPKETDYIIIETDASEEGWGAVL
VCKPDKYSGKDTEKIAGYASGNFGEKKTWTSLDYEIEAINEALNKFQIYLDKDFTIRTDC
EAIVKGIKTEDYKKRSKTRWIKLRDNLLKDGYKPTFEHIKGNKNFLPNFLSREGDFILKC
LQNPDSTESYSIDSSESIPLYIDSKESHSIESDDSIPLYRDKLLPLVERLKEKSA
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgagccttagaccatttactggtacttctagaactataacccaagattcaacctctgaa
tctaatataaaaaagggaaaaaactcaacaaaaagagaattaatagaagaagtagatgtt
aatcaagaagtagaaaactttgattggaaaaaactatcaggaattaaacctaataaacta
tatgagaaaaattggcaagaaaaagttaagttaaaacaacaatctatagtttcagcatat
aaagaagaagctattagtgtaactcataatgcatatactactactttatttccacaagaa
gtaattaaaaatgttaagaatcagggaaaactttattatcatataggcatgatggccata
ggagttaaaggacttcatagaagaaaaataggaactaaagtcatgataatgttttatgat
gatagtttcggcaaagctagagaagctagcattggatcaatagaaatggatatgaacgcc
ggttgtggagtattctactcctgccccgactttgcaaaatatattaaagatttatcacac
cttaagatagggatacaaaccctaggatatgaaaattatgaaggaaaaaatctttcggta
gcaatcaaaactataggaagattgaccaccaatatacagtcaaaatataagataaatgta
aaagatattgtagaacagatatcatcacaaggaatcattatggtagcacccatggaaata
gattcatcacacctagatgggaatgaatgggatcttagtaaattcttaaaccatgaaaac
acaagtagagtcccaaccaaagccttaatatatcaaaatctacaaggaggagaatcctta
agattttcaaattataagcaaactagaatgcatgatccaactgaaaataattcagatgaa
gatgaagatttaaaaatcttaggagaacaactaaatattaaaatggcaagattttacaca
atgcaaaccccagaagaagaattacgagaagtaattcaacaattagaaagagaaaaacaa
gccatgatagcaaaactagaagctaaaatgaaagagtcatccaaaatggcaatagtagaa
gataatttcaatccaaataacgaatatctagaagatacatattctgaatatgaagatcta
gaattcgagaaattaggattaactggatgggaagacttagatcaggattccatagaaacc
gaagaaataactgaatgggaaaatcctaatcaagtacttcatagagaaattagagcatat
aaatcagtatccgaacaaatagaagatatattcggagaactactaaaggaacacggaaac
tatgatatggccctcaaaaacctagaagaaaaatacgacctagataaaatagaaaaggcc
aaatctatagaagaaatagctaagtcatctacatcgtcagaaattaggccaactaaacga
cctaaagaagaacaaacagcctatgaagatgatatgagagatgattggaaaagaaaagaa
ttaacagtaaatcccatagaagcctcaaaagatagaaattttgaaagaataggaagttca
tataagaaaaacttttaccctagtagaagtgagatattaaacttagataacgttccccca
caattttactatgaccagctagtaacctgggaaggaatagttaaaaatgaatgggaagca
cgtaagaaagatgggatggatatgtggtcttggatggatggtagaataacaggattagtg
ttatatttagtccaagattggatatctaaaaatcaggcagcttacaatgatataaaatct
agaggtgatagacctgaaaacttcgtaaaaatggtaaaagataggttcttaatagaagat
cctacagatgaaagaagaacagcactacaaaggttagcacaaagagaattagaagcctta
aactgcgaagatcctactaaaattcaaccatttatggctgaatatcttaagaaagcctca
gaagccaaaaaaggatttgatgtagtttatgtagaaagactctttgatagactaccagaa
gcagtaggaaaggtagtaaaagcggactttgttaaagacggtaattcctatgaagcagga
ataggaatagcagtttcatatatatccacatggatgagagcaaaatgcattaaggaaaca
gaagctaaaactcaaaagaaagcatccttagcattctgtagatccatatatactatagga
gattataagaaacgaaaaatcctaaaaagagttacaaactataacaaaaataggagaaaa
aactatgtcagaagaccaagtattaagaaaaaatgtagatgttatatctgtcaagatgaa
aatcacctggctaatagatgtcctagaagatatactaatcaggctagagcaagtctaata
gatggattagacgaagatatagtatctatagcatcagatgacgaggatattgaaaatttc
cttgaaataatagaacttgatgaatttatagcacattctagtcaagaacatgaacataca
tgggaaatcggaggaaagaaagataaggtatgtgaaatttgcagttattttacggattat
aataaaactgttagttgtaaaacttgtgaaacccaatactgcaaaacatgttctgatcaa
ctagcactagaagtgacagaagtcaaaaaacctacaaaagaagaaacaatgatagacgac
ctaaaattaaatgttaaaaatctagaatttagagtcaccattctagaacataaggtagaa
atgcagaatcttcaagataaattcgaaactatgcaaattagaaataaatcagaaataaca
gaaataccaacaacctcattagctatgagagcaaatgaatcaaactacataaaaacatca
attaataaaactgcaggttgttatgtagaaacaaaaatctcattcaacaatgaaaataga
atcataacagctctaatagattcgggttcaacacataatataatatgtccaacattgata
ccagcatcatggattaataatacacatagagaaattataatgtttgctgtagacaatagc
aaatataatctgaatcaagagctaatagatgatataaaattacaattccaagaagttgac
gaaacttttggaataaaatataaattaggacaaacctatgtagcacctaagccaacaaaa
acatttataataggacacagattccttacaaatgaaaatggtagtgttacaatccataaa
gattatataactatacaaaaaactacgggaatatacccaacagccagacatgaacttaaa
tcagagtttgcgcgaaagcatggtggacgcccgccattattttcaaacattcctgaaacc
tataacaaaattcctcatttgcattcatatcagcctcaaccaatattaggatataagaat
gaaataggaaatcaaagtttaatcactatggtgaaagaattagaagcacttggattcata
ggagatgacattactaaaaatagaacaacgtgggtatgtgacttcaaaatcataaaccca
gatattaatataacttgtgcaacaattccatacacaccagcagataaagaagtatttgaa
aaacaaattaaggagctactagataataagttaatcaagaaagctgatccaacatgcagg
catagaacagcagcatttatagtaagaaaccattctgaagaagtagctcagaaacctcga
atagtctataactataaacgtttaaatgataatatgcatacagatccttttaatattcct
cataagatttcaatgattaatctaatacagaaagctaatatattttctaagtttgattta
aaagcaggatttcatcatatgaaattaaaagatgatttcaaagattggactacttttaca
tgctcagaaggattatatacttggaacgtctgtccatttggtatagctaacgctccttgt
gcatttcaaagatttatgcaggaatcctttggagatttaaagtttgcattattatatata
gatgatatacttattgcatctaataacgaaaaagagcatatagaacatcttaagattttc
tttaatagagtaaaagaagtaggatgtgttcttagtaagaaaaaatcaaaaatgtttctt
aaagaagtagaatatcttggagtagaaattaaagaaggaaagattagtcttcagccgcat
atagttgataagatcaaaaaatttgataaaaataaactcaacaccctaaagggactacaa
gcatatctagggttactcaattatgccagaggatacatcaaagacctatcaaagctagta
ggaccactttataaaaagacaggaaaaaatgggcaaagaatctttaacaaagaagattgg
aatatcatctttaagatagaaagagaggtatcaaagataaagcctttagaaagacctaaa
gaaaccgactacatcattatagagacagatgcgtcagaagaaggctggggagcagtctta
gtctgtaagccagataaatatagtggcaaggacactgagaaaatagcaggatatgcatca
ggaaactttggagagaagaaaacctggactagtttagattatgaaatagaagctataaat
gaagccctaaacaagttccagatatacttagacaaagattttacaattagaactgattgt
gaagcaatagtgaaggggataaaaacagaagactataaaaagagatcaaagaccagatgg
atcaagttaagagataatctcttaaaggatggatacaagcctacctttgagcatatcaag
ggaaacaaaaactttttaccaaacttcttatcccgtgagggagattttattttaaaatgt
cttcaaaaccccgattctacggaatcatattctatagattcgtcagaatcaattccacta
tatatcgattcgaaagaatcacattctatagagtctgatgactcaattccactatacagg
gacaagcttcttcctctagtcgaaaggctaaaggaaaagagtgcctaa
DBGET
integrated database retrieval system
