Viruses: 1489777
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Entry
1489777 CDS
T40000
Symbol
L, SeVgp9
Name
(RefSeq) Respirovirus muris; RNA polymerase protein
KO
K25521
Respirovirus RNA-directed RNA polymerase L [EC:
2.7.7.48
3.6.1.-
2.7.7.88
2.1.1.375
]
Virus
3052731
Respirovirus muris
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Mononeg_RNA_pol
Mononeg_mRNAcap
Methyltrans_Mon_2nd
Motif
Other DBs
NCBI-GeneID:
1489777
NCBI-ProteinID:
NP_056879
RS:
NC_001552
UniProt:
O55528
LinkDB
All DBs
Position
NC_001552:8556..15242
AA seq
2228 aa
AA seq
DB search
MDGQESTQNPSDILYPECHLNSPIVRGKIAQLHVLLDVNQPYILKDDSIINITKHKIRNG
GLSLRQIKIRSLGKALQRTIKDLDRYTFEPYPTYSQELLRLDIPEICDKIRSVFAVSDRL
TKELSNGFQDLWLNIFKQLGNIEGREGYDPLQDISTIPEITERYSRNKWYRPFLTWFSIK
YDMRWMQKTRPGGPLDTSNSHNLLECKSYTLVTYGDLVMILNKSTLTGYILTPELVLMYC
DVVEGRWNMSAAGQLDKRSTGITSKGEELWELVDSLFSSLGEEIYNVIALLEPLSLALIQ
LSDPVIPLRGAFMRHVLTELQTVLTSKDVYTDPEADAIVESLLAIFHGTSIDEKAEIFSF
FRTFGHPSLEAVTAADKVRAHMYAQKAIKLKTLHECHAVFCTIIINGYRERHGGQWPPCD
FPDHVCLELRNAQGSNTAISYECAVDNYTSFIGFKFRKFIEPQLDEDLTIYMKDKALSPR
KEAWDSVYPDSNLYYKVPESEETRRLIEVFINDENFNPEDIIDYVESGDWLKDEKFNISY
SLKEKEIKQEGRLFAKMTYKMRAVQVLAETLLAKGIGELFSENGMVKGEIDLLKRLTTLS
VSGVPRTDSVYNNPRSSEKRNESMKKRNSKGYWDEKKRSRHEFKATDSSTDGYETLSCFL
TTDLKKYCLNWRFESTALFGQRCNEIFGFKTFFNWMHPVLEKCTIYVGDPYCPVADRMHR
QLQDHADSGIFIHNPRGGIEGYCQKLWTLISISAIHLAAVRVGVRVSAMVQGDNQAIAVT
SRVPVAQTYKQKKNHVYEEITRYFGALRHVMFDIGHELKLNETIISSKMFVYSKRIYYDG
KILPQCLKALTRCVFWSETLVDENRSACSNISTSIAKAIENGYSPILGYCIALYKTCQQV
CISLGMTINPTISPTVRDQYFKGKNWLRCAVLIPANVGGFNYMSTSRCFVRNIGDPAVAA
LADLKRFIRADLLDKQVLYRVMNQEPGDSSFLDWASDPYSCNLPHSQSITTIIKNITARS
VLQESPNPLLSGLFTETSGEEDLNLASFLMDRKVILPRVAHEILSNSLTGVREAIAGMLD
TTKSLVRASVKRGGLSYGILRRLVNYDLLQYETLTRTLRKPVKDNIEYEYMCSVELAVGL
RQKMWIHLTYGRPIHGLETPDPLELLRGTFIEGSEVCKLCRSEGADPIYTWFYLPDNIDL
DTLTNGSPAIRIPYFGSATDERSEAQLGYVRNLSKPAKAAIRIAMVYTWAYGTDEISWME
AALIAQTRANLSLENLKLLTPVSTSTNLSHRLKDTATQMKFSSATLVRASRFITISNDNM
ALKEAGESKDTNLVYQQIMLTGLSLFEFNMRYKKGSLEKPLILHLHLNNGCCIMESPQEA
NIPPRSTLDLEITQENNKLIYDPDPLRDVDLELFSKVRDVVHTVDMTYWSDDEVIRATSI
CTAMTIADTMSQLDRDNLKEMIALVNDDDVNSLITEFMVIDVPLFCSTFGGILVNQFAYS
LYGLNIRGREEIWGHVVRILKDTSHAVLKVLSNALSHPKIFKRFWNAGVVEPVYGPNLSN
QDKTLLALSVCEYSVDLFMHDWQGGVPLEVFICDNDPDVADMRRSSFLARHLAYLCSLAE
ISRDGPRLESMNSLERLETLKSYLELTFLDDPVLRYSQLTGLVIKVFPSTLTYIRKSSIK
VLRTRGIGVPEVLEDWDPEADNALLDGIAAEIQQNIPLGHQTRAPFWGLRVSKSQVLRLR
GYEEITRGEVGRSGVGLTLPFDGRYLSHQLRLFGVNSTSCLKALELTYLLSPLVDKDKDR
LFLGEGAGAMLSCYDATLGPCINYYNSGVYSCDVNGQRELNIYPAEVALVGKKLNNVTSL
GQRVKVLFNGNPGSTWIGNDECEALIWNELQNNSIGLVHCDMEGGDHKDDQVVLHEHYSV
IRIAYLVGDRDVVLISKIAPRLGTDWTRQLSLYLRYWDEVNLVVLKTSNPASTEMYLLSR
HPKSDIIEDSKTVLASLHPLSKEDSIKIEKWILIEKAKAHEWVTRELREGSSSSGMLRPY
HQALQTFGFEPNLYKLSRDFLSTMNIADTHNCMTAFNRVLKDTIFEWARITESDKRLKLT
GKYDLYPVRDSGKLKTISRRLVLSWVSLSMSTRLVTGSFPDQKFEARLQLGIVSLSSREI
RNLRVITKTILDRFENTIHSITYRFLTKEVKILMKILGAVKMFGARQNEYTTVVDDGSLD
DIEPYDSL
NT seq
6687 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcaagagtctacccaaaacccttctgacatactctatccagaatgtcacctg
aactcccctatagtgaggggaaaaatagcacaattacacgttttgttagatgttaaccag
ccctacattctgaaagatgacagtataataaatatcacaaagcacaaaatcaggaatggg
ggtttgtcccttcgtcagattaagatcagatctctaggcaaggctcttcaacgcacaata
aaggatctagaccgatacacgtttgaaccgtacccaacctactcccaggagttacttagg
ctcgatataccagagatatgcgacaagatccgatctgttttcgcggtctcggatcggctg
actaaggagctgtctaatgggttccaggatctctggttgaatatctttaagcaactaggt
aacatagaagggagagaggggtacgatccattgcaggatattagcaccatcccagagata
actgagaggtatagcaggaacaaatggtataggccattcctaacttggttcagtatcaaa
tatgatatgcggtggatgcagaaaactagaccagggggacctctagatacctctaactca
cataaccttctagaatgcaaatcatacactctagtaacatatggagatcttgtcatgata
ctgaacaagtcgacattgacagggtatatcctaacacctgagctggttctgatgtattgt
gatgttgtggaagggaggtggaatatgtctgctgcagggcagttagataaaaggtctact
gggataacaagcaaaggagaggagttatgggagttagtggattccctcttttcgagtctc
ggggaggaaatatacaatgtcatcgcattactcgagcctctatcacttgctctcatacaa
ttaagtgatcctgttatacctctacgtggagcatttatgaggcatgtgttgacagagcta
cagactgttttgacgagtaaagacgtgtatacggacccggaggcagatgctattgtggag
tcgttactagctatatttcatgggacttctattgatgagaaagcagagatcttttcattc
tttcggacattcggtcatcctagcttggaagctgtcaccgctgccgacaaggtgagagct
catatgtatgcacaaaaggcaataaagcttaagaccctacacgagtgtcatgcagtgttc
tgcacaatcatcataaatggatatagagagaggcatggcgggcagtggcccccttgcgac
ttccctgatcacgtgtgcctggaacttagaaatgctcaagggtccaatacggccatctct
tacgagtgtgcagtagacaactatacaagtttcataggcttcaagttccggaagtttata
gaaccacaactggatgaagatctcacgatatatatgaaggacaaagcattatcgcccagg
aaggaagcatgggactctgtgtatccagacagtaacctgtactataaagttccagagtct
gaagagaccaggaggctcatcgaagtgttcataaatgatgagaatttcaacccagaagac
atcatcgattacgtggagtcaggagactggttaaaagatgagaagttcaacatctcgtat
agtttgaaagagaaagagatcaagcaagagggccgtctgttcgcaaagatgacttacaaa
atgcgagctgtacaggtcctagcagagacactgttggcgaaaggaataggagagttgttc
agcgaaaatggaatggtgaaaggagagatagacttacttaaaagactaactactctctct
gtctcaggagttcctaggactgattcagtgtacaataatcctagatcatcagagaagaga
aatgaaagcatgaagaagagaaactcaaaagggtactgggacgaaaagaagaggtcgaga
catgaatttaaagcaacagattcatccacagacggttatgagacgttaagttgtttccta
acaacagacctcaagaagtactgcttaaattggagatttgagagcactgcacttttcggg
cagaggtgcaatgagatatttggcttcaagacctttttcaattggatgcatccagtcctt
gaaaagtgtacaatatatgttggagacccttactgtccggtcgccgacaggatgcatcga
caactgcaagatcatgcagactctggtattttcatacacaatcctagaggaggaatagaa
ggttattgccagaaactatggaccttaatctcaatcagtgcgatccacctagcagctgtg
agggtaggtgtcagggtctctgcaatggttcaaggcgacaatcaagctatagcagtaaca
tcaagagtacccgtagcccagacttacaagcagaagaaaaatcatgtctatgaagagatc
actcgttatttcggtgctctaagacatgtcatgtttgatataggacatgagctaaaattg
aacgagaccatcattagtagtaaaatgtttgtctatagtaaaaggatatattatgatgga
aagatcctaccgcaatgtctgaaggccttgactagatgtgtattctggtccgagacattg
gtcgatgagaacagatctgcttgttccaatatctcaacatccatagcaaaggccatcgag
aatgggtattctcctatactaggctactgcattgcgttgtacaagacttgtcagcaagtg
tgtatatcattagggatgactataaatccaacaatcagcccgaccgtaagagatcaatac
tttaagggtaaaaattggctgaggtgtgcagtgttaattccggccaatgttgggggattc
aactatatgtctacatctaggtgctttgtcaggaatattggggatccggcagtcgcagcc
ctagctgatctcaagaggttcatcagagcagatcttctagataaacaggtgttgtatagg
gtaatgaatcaagagcctggtgattctagttttctagattgggcttcagatccttattca
tgcaaccttccgcactctcagagtataactacaattataaagaatatcactgctaggtct
gtgctgcaggaatctccgaatcctctactgtctggtctttttacagagaccagtggcgaa
gaggatctcaacctggcctcgtttcttatggaccggaaagtcatcctacctagagtggct
catgagatcttgagtaattccttaacaggggttagggaagcaattgcagggatgcttgat
acaaccaagtctctagtgagagcgagtgttaagaggggaggattgtcatatgggatattg
aggagacttgtcaattatgatctgttgcagtacgagacactgactaggactctcaggaag
ccggtgaaagacaacattgagtatgagtatatgtgctcagttgagctggctgtcggttta
aggcagaagatgtggatccacctgacgtatgggagacctatacacgggctagaaacacca
gaccctttagagctcttaaggggaacatttattgaaggctcagaggtgtgtaagctttgc
aggtctgaaggagcggaccccatctatacatggttttacctcccagacaatatagacctg
gatacacttacaaacgggagtccagctatacggattccctattttggatcagcaactgat
gaaagatcagaagctcaactcggatatgtaaggaatctgagtaaaccagcaaaggcggct
atacggatagctatggtgtacacgtgggcttacgggacagatgagatatcgtggatggaa
gctgccctcatagcccagacaagggctaatctgagcttagaaaatctaaagctgctgact
cctgtttctacatcaactaatctctctcataggttaaaagacacggcaacccagatgaag
ttctccagtgcaacactagtccgtgcaagtcggttcataacaatatcaaatgacaacatg
gcactcaaagaagcaggggagtcgaaggacactaatctcgtatatcagcagattatgcta
actgggctaagcttgtttgagttcaatatgaggtataagaaaggttccttagagaagcca
ctgatattacacctacatcttaacaacgggtgctgtataatggaatctccacaggaagca
aatatccccccaagatccactttggatttggaaatcacacaagaaaacaacaaattgatc
tatgatcccgatccactcagggatgtagacctagagctatttagcaaggtcagagatgtc
gtacatacagttgacatgacctattggtcagacgatgaagttatcagggctactagtata
tgtactgcaatgacaatagcggatacaatgtctcaattagatagagacaacttaaaggag
atgatagcactggtaaatgatgatgatgtcaacagcctgattactgagtttatggtgatt
gatgttcctctattttgctcaacattcggaggtatcctagtcaatcagtttgcatactca
ctctacggcttgaatatcaggggaagggaagaaatatggggacacgtagtccggattctg
aaagatacctcccacgcagtcttgaaagtcttatccaatgctctgtcccatcccaagatc
ttcaaacgattctggaatgcaggtgttgtagagcctgtgtatgggcctaacctttcaaat
caggataagacactactagccctctctgtatgtgagtattctgtggacctattcatgcac
gactggcaaggaggtgtaccgcttgaggtctttatctgtgataatgacccagatgtggct
gacatgaggaggtcctctttcttggctagacaccttgcatacctgtgcagcttggcagag
atatctagggatgggccaagactagagtcaatgaactctcttgagaggctagagacatta
aagagttatctggaactcacgttccttgatgaccctgtactgaggtacagtcaattgact
ggcttagtcatcaaagtattcccgtcaactttgacttacatccggaagtcatctataaag
gtattaagaacaagaggaataggagtccccgaagttttagaagattgggaccccgaggcg
gataatgcactgctagacggcatcgcagcagaaatacaacagaatattcccttaggacat
cagactagagcccctttttgggggctgagggtatccaagtcacaggtactgcgtctccgg
gggtacgaagagatcacaaggggtgaggtaggcagatcaggtgttggtctgacgttacca
ttcgatgggaggtatctatctcaccagctgaggctctttggtgttaacagtactagctgc
ttaaaagcacttgaacttacctacttattaagccccttggttgacaaggataaagatagg
ctgtttttaggggaaggagctggggctatgctctcctgttatgacgctactcttggccca
tgcatcaactattataactcgggggtatactcttgtgatgtcaatgggcagagagagtta
aatatatatcctgctgaggtggcattagtgggaaagaaattaaataatgttaccagtcta
ggtcagagggttaaggtattgttcaacgggaatcctggctcgacatggatcgggaatgat
gaatgtgaggctttgatttggaatgaactacagaataattcgataggcctagtccactgt
gacatggaaggaggagatcataaggatgatcaagttgtactgcatgagcattacagtgtg
atcaggattgcgtatctggtgggggatagagacgttgtgctgataagtaagattgctccc
aggctgggcacagattggaccaggcagcttagcctttacctgaggtactgggatgaggtc
aacctggtagtgcttaaaacatctaatcctgcttctacagagatgtatctcctctcaagg
catcccaaatctgacatcatagaagatagcaagacagtgctggccagtcttcaccctctg
tcaaaggaagacagcatcaagatagaaaagtggatcttgatagagaaagcaaaggctcac
gaatgggttacccgggagttgagagaaggaagctcgtcgtcagggatgcttagaccttac
caccaggcactgcagacgtttggttttgaacccaatttatataaactgagcagggatttc
ctgtccactatgaacatagctgacacccacaactgcatgacagccttcaacagagtttta
aaggatacaatctttgagtgggctagaataaccgagtcagacaaaaggctcaaactaact
ggtaagtatgacctgtaccctgttagagactcaggcaagttgaagacaatttctagaaga
cttgtgctgtcttgggtatcattatctatgtctacaagactggtaactgggtctttcccc
gaccaaaagtttgaggcaagactccaattagggatagtttcactgtcatctcgtgaaatc
aggaacctgagggttatcacaaaaactatattagataggtttgagaatactatacatagt
ataacatatagatttctcaccaaagaagtaaagattttgatgaagattttaggagctgtc
aagatgttcggggctaggcagaatgaatacacaaccgtggttgatgatggatcattagat
gacattgagccatatgacagcttgtga
DBGET
integrated database retrieval system
