Viruses: 1493995
Help
Entry
1493995 CDS
T40000
Symbol
PVMgp1
Name
(RefSeq) Potato virus M; polyprotein
KO
K26628
Betaflexiviridae RNA replication polyprotein
Virus
12167
Potato virus M
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
RdRP_2
Peptidase_C23
Viral_helicase1
AAA_30
AAA_19
AAA_22
AAA_18
ABC_tran
Motif
Other DBs
NCBI-GeneID:
1493995
NCBI-ProteinID:
NP_056767
RS:
NC_001361
UniProt:
P17965
LinkDB
All DBs
Position
NC_001361:74..5980
Genome browser
AA seq
1968 aa
AA seq
DB search
MAVTYRTPMEDIVNCFEPATQAVIANSAATLYKNFEEQHCQYFNYYLSPLAKRKLSMAGI
YLSPYSAVVHSHPVCKTLENYILYSVLPSYINSSFYFVGIKERKLQLLKSKCKNLDSVQV
VNRYVTSADRMRYTNDFVPYGSYEHECLVHKGVGLDNEALRGLVGPLRRHKAKNLFFHDE
LHYWSSKVLIDFLDVMRPDKLLGTVVYPPELLFKPTRSLNEWCYTYDIVGDTLMFFPDGV
QSEGYQQPLKGGYLLGARSLKLPDGTVYMVDVLCSKFPHHLISITKGEAAAPTHRAFGPF
EAVASEALKATLSPDYPCAFPVSYEVVNKIYRYLRTLKKPDEQSAIAKLSQIIAEPSGRE
IDFVECFARLVIHNSSMCATIMPEQLKEFMGNWLGKMPSVLARRFSSVRAVCVNKFIRGL
KPYSFTLRLNEITWWNIWENSYAWFFDTDAEVDVPEKLDSLFMGEGAGLVAHITSRPYVG
TVPLADREWNALLCMDSQKLLHAMRRMFMRGAWGAHMCVISREFLLKYVEARLKSSCLIA
KARRRGQHKEKLEAWEVLGLKSSDALFRAMTYLCNARLEPMFSESGLRFFLTRGRNNLYG
LTNYTEGKRAVTGVQNLWSNVVHEVSTKRHKGMIRLEKARVTEQPRSEFASCVLEPEVWR
DVEAALDIELGEVACACNARFVQGVVLSNQAGLNVREQVAGASVGLYTKDRSNLKWGNSE
LLSNGWGRSLSVWMEINSVSQKFDVAVRLSYSKETQMNVLLPSLDGIERGAGATVVNLRK
CGAFIVRCARGWRLALAWMDHICLEVMANVAYGHECYMRSWGTMDVVVFLKRATVSEQVT
FESAQEVGPIEGKSDSGAPGVGVNLDLGGVVGSEYPANGAERYKRVSGPGDGCCCWHSFA
YLVGMHHMELKRLCTSHVFENAALNVELEQCKASGAFVTHAAILATALRLRAEIRVHNAG
TGRVHRFAPKQKNMALDLWLESEHYEPQVLRNGCVIESVAQALGTRNADILAVVEERCCE
EVVESVQAGLGLNLHHVEIVLQCFDIVGHCNLGDKEITLNAGGKMPFCFDISDEHMSFCG
RRKDPICKLVSGALHGKMFAESALLDLENCGLKIDFEPNWNRAGMLADSMYQGATGVLGS
ALFNNKRNMREKFVRNVSLSLHAIVGTFGSGKSTLFKNLLKYGAGKSLDFVSPRRALAED
FKRTVGMNERGGRAKAGQENWRVTTLETFLARVEFLTEGQVVILDEMQLYPPGYFDLVVS
MLKVDVRLFLVGDPAQSDYDSEKDRLVLGAMEENMSVVLGAREYNYKVRSHRFLNCNFIG
RLPCEINKDDCTIDEPHIMRMHLENLLDVAEEYKSVVLVSSFDEKMVVCAHLPEAKVLTF
GESTGLTFMHGTIYISAVSERTNERRWITALRRFRFNLCFVNCSGMDYQQLAGRYKGRVR
SKFLCKTAIPDDLNSMLPGQALFKSEYPRLIGKDEGVREEKLAGDPWLKTMINLYQAPEV
EIAEEPEVVMQEEWFRTHLPRDELESVRAQWVHKILAKEYREVRMGDMVSEQFTHDHTKQ
LGAKQLTNAAERFETIYPRHRASDTVTFLMAVKKRLSFSNPGKEKGNLFHAASYGKALLS
EFLKRVPLKPNHNVRFMEEALWNFEEKKLSKSAATIENHSGRSCRDWPTDVAQIFSKSQL
CTKFDNRFRVAKAAQSIVCFQHAVLCRFAPYMRYIEMKVHEVLPKNYYIHSGKGLEELDA
WVKKGKFDRICTESDYEAFDASQDEFIMAFELELMKYLRLPSDLIEDYKFIKTSLGSKLG
NFAIMRFSGEASTFLFNTLANMLFTFMRYNIRGDEFICFAGDDMCASRRLQPTKKFAHFL
DKLKLKAKVQFVQFVNKPTFCGWHLCPDGIYKKPQLVLERMCIAKEMNNLSNCIDNYAIE
VAYAYKLGEKAVNRMDEEEVAAFYNCVRIIVRNKHLIRSDVKQVFEVL
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcacatacagaacgccaatggaagatattgttaattgcttcgagccagcaact
caggctgtgatagctaatagcgctgctacactgtacaagaacttcgaggagcaacactgc
caatacttcaattactacctttctcccttggcgaaaaggaaattgagcatggcaggcata
tacttgagtccgtactcggcagtcgtgcattcgcatccggtttgtaagacgctggaaaat
tacatattgtatagtgttttaccttcgtacataaattctagcttttactttgtaggtatt
aaggagagaaaactgcagctgttgaaatcaaaatgcaaaaatttggacagtgtgcaggtg
gtgaatagatacgtgaccagtgcagacagaatgaggtacacaaatgatttcgtgccatat
ggctcatacgagcatgaatgcctggtgcacaaaggagttggtctggacaacgaagcgctc
agaggactagtaggtccactaaggcgtcacaaagcaaaaaacctatttttccatgatgag
ttgcattactggagtagtaaggtgcttattgatttcttagatgtcatgcgtccagataag
ctacttggtactgttgtgtaccccccagaattactattcaagccaacacgtagcttgaat
gagtggtgctacacttatgatatagtgggggacacactgatgtttttccctgatggcgtg
cagagcgagggctatcagcagccattaaagggtggttacctactgggggcaaggagtttg
aaattgccggacggtacagtgtacatggttgatgtgctgtgcagtaaatttccccaccat
ttgatttcgataacaaaaggtgaagcggcagcgccgacgcatcgtgcgttcggcccattt
gaggcggttgcatcggaagctttgaaagcgacccttagtcctgattacccgtgtgctttc
cccgttagctatgaggtggttaacaagatttacaggtacttacgtacactgaaaaaaccc
gatgagcagtccgccatagcaaagctaagccaaataattgctgagccgtccgggagggaa
attgatttcgtggagtgcttcgcgcggctggtgattcacaattctagcatgtgcgccaca
atcatgccagagcaactgaaagaattcatggggaactggctcggaaagatgccttctgtg
ctggcacgccgctttagtagtgttagagctgtgtgtgtgaacaaattcatccggggtcta
aaaccgtacagcttcaccctgcgcttgaatgagataacctggtggaacatttgggaaaac
agttacgcctggttctttgatacagatgctgaggtcgacgtaccagaaaaattggactcg
ctattcatgggagaaggtgctggccttgttgcacatatcacctctaggccctatgtaggg
acagtcccgttagcagaccgggagtggaatgccctgttgtgcatggactcgcagaagttg
ttgcacgcaatgaggcgcatgttcatgagaggcgcttggggggcgcacatgtgcgtcatt
tccagggaatttttgctcaaatatgtggaggcaaggttgaaatcaagctgtttaattgca
aaggcccggagaaggggtcaacacaaagagaagcttgaggcatgggaagtcctggggttg
aagagctcagatgcactgtttagggccatgacgtacctgtgcaacgcgagattggagccc
atgttctctgagtcaggcctgagatttttcttaacgcgcggaaggaataatctgtacggc
ctcaccaattatacagagggaaagcgtgcagtaactggggtgcagaacctatggagcaat
gtggtgcatgaggtgagtaccaagcggcacaaaggcatgataaggctagagaaggcccga
gttacagagcagcccagaagtgagttcgcaagttgcgtgttagagcccgaggtatggcgc
gatgtggaagctgcgctcgatatcgaattgggcgaagttgcttgtgcttgcaacgcacga
ttcgtgcaaggggtggtactgagcaaccaggcaggtcttaatgtccgtgagcaagttgca
ggtgcttctgtggggctgtacacgaaagatagaagcaacttgaagtggggtaacagtgag
ctgcttagcaatggttggggaaggagcttgagcgtctggatggagattaactccgtgagc
caaaaatttgatgtcgccgtgcgtttgagttacagcaaggagactcaaatgaatgtgctg
ctgccgagccttgatggaatagaacggggcgcgggcgcaactgtggttaatctgcggaag
tgtggtgcattcatcgtaaggtgcgctcgagggtggagactggcgctggcgtggatggac
cacatttgtttggaggtgatggccaacgttgcatacggtcatgaatgctatatgaggtct
tggggcacaatggatgttgtggtcttcctgaaaagggccactgtttctgagcaggtaact
tttgagagtgcacaggaggtgggccccattgagggtaagagtgattcgggggcaccagga
gttggagtgaacctcgacttgggtggggtcgttggcagcgagtaccccgccaatggtgct
gagcgatataagcgggtgtctgggcccggtgatggttgctgttgctggcacagttttgca
tacctagttggcatgcaccacatggagttgaagcgattgtgcacttctcatgtttttgaa
aatgccgcactcaatgttgagctggagcagtgcaaggcatctggcgcattcgtcactcat
gccgccatactggcaacagctttgagactcagagctgaaattagagtgcacaacgctggc
acaggtagagttcatcgttttgctcccaagcagaagaacatggcacttgatttgtggctc
gagtcggagcactatgaaccacaggtacttcgcaatggttgtgtaattgaatccgtggca
caagcactgggcacgcggaatgccgatatcctggctgttgtagaagagcggtgctgtgag
gaggttgttgaaagcgtgcaagctggtcttggtctaaatctgcatcatgtggagattgtg
ctgcaatgtttcgacattgtagggcattgcaacttaggggataaggaaatcacgcttaat
gctggtggtaagatgcccttctgcttcgatatctctgatgaacacatgagtttttgcgga
cggcgcaaagaccccatctgcaagttagtaagtggtgcattacacggcaaaatgtttgcc
gaatctgcgttgctagatctggagaactgcggcttaaaaatagacttcgaaccaaattgg
aatcgcgcaggaatgctcgcagatagcatgtatcaaggagccacaggagttttgggttct
gcactcttcaataataagagaaatatgcgtgagaaatttgtgcgtaatgtatctttgagc
ttgcatgcgatagtgggaacctttggctctgggaagagtacgctgttcaaaaacctactg
aagtatggtgcaggcaaatcgctggattttgtgtcaccgaggcgtgcgttggccgaagac
ttcaagcgtacagttgggatgaacgagcgtggcgggagagcaaaagcagggcaagagaac
tggagagttaccacgttggagacattcttagcaagagtggaatttctaacagagggccag
gtggttattttggacgagatgcagctgtatccacctgggtactttgacctagttgtgagt
atgcttaaagtggatgtgagacttttcctcgtgggcgatcctgcacaaagcgactacgac
agcgagaaggatagattggtgctgggagctatggaggagaacatgagcgtcgtgcttggg
gcacgcgagtacaattacaaagtgcggagtcatcggtttttgaattgcaatttcataggg
agacttccatgtgaaataaataaagatgattgcacgattgatgagcctcacattatgcgc
atgcaccttgaaaatcttctggacgtggcagaagagtataaatctgtggtgctcgtaagc
tcttttgatgagaaaatggtagtgtgcgcgcatctcccagaggcgaaggtgctcactttt
ggagagagcactggattaacattcatgcatggcacaatttacatctccgcggtgtcagag
aggactaatgagcgaagatggataacggctctccgtcgatttcgcttcaatttgtgtttt
gtgaattgcagcgggatggattatcagcaattggcagggagatacaaaggtcgagtgcgg
tccaaattcctgtgcaagactgctattcctgacgatctaaatagcatgctgcccggccaa
gcactctttaagagtgagtacccgcgattgattggtaaagatgagggtgtcagagaagag
aagcttgcaggcgatccatggctcaaaacaatgattaatctatatcaagcaccggaggtg
gaaattgcagaagagcctgaggtggtgatgcaggaggaatggtttcgcacacatttgccg
cgtgatgagttggagagcgttagagcgcaatgggttcacaagatattagccaaggagtac
agagaggtgcgcatgggagatatggtgtcagagcaattcactcacgatcacaccaaacaa
ctgggtgcgaagcaactcacaaatgcagctgagagattcgagaccatataccccaggcat
agagctagtgacaccgtcacttttctaatggccgtgaagaaaagattgagcttctctaac
cctgggaaggaaaagggaaacttgttccatgcagccagctatggtaaagcattgctatca
gaattcctcaagcgtgtgccgctaaagccgaaccacaatgtgcggtttatggaggaagca
ctgtggaacttcgaagagaagaagctgagcaaaagtgctgccacaattgagaatcactct
ggacgctcatgccgggattggcctacagatgtggcccagattttctcaaaaagtcagttg
tgcaccaaattcgacaataggttcagggttgctaaagcagcgcagagcatcgtgtgtttt
caacatgcggtcttgtgtcgttttgcgccctacatgcgatacattgagatgaaagtgcac
gaggtgctgccgaagaattactacatccactcaggaaagggtttggaggagctggatgcg
tgggtcaagaaagggaagtttgaccggatttgcacggagtctgattatgaggcattcgat
gcgtcacaagatgaatttatcatggctttcgagctggaattgatgaagtacttaaggtta
ccaagtgatctaatcgaggattacaagttcatcaagactagcctaggatctaaattgggc
aattttgctataatgcgcttctccggggaggcaagcacttttctgtttaacacactggcc
aatatgttgttcacctttatgaggtacaacatacggggtgatgaattcatatgctttgct
ggggatgatatgtgcgcgtcgcgaagattgcaacccacaaagaagtttgctcacttccta
gacaagcttaaactgaaagcgaaggtgcaattcgtgcaattcgtgaataaaccaactttt
tgcggttggcacctgtgtcccgatggtatatataaaaagccgcaacttgtgctagagaga
atgtgcatcgcgaaagagatgaacaacctgagcaattgcattgataattacgccattgag
gtggcgtacgcatataagttgggggagaaggctgtgaatagaatggatgaggaggaagtc
gcggcgttctacaactgcgtgagaatcatagtgcgaaacaaacacctcattcgctctgat
gtgaaacaagtatttgaagtgctttaa
DBGET
integrated database retrieval system
