Viruses: 1493999 Help Entry 1493999           CDS       T40000                                  Symbol ACLSVgp1 Name (RefSeq) Trichovirus mali; replicase Virus 12175  Trichovirus mali Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Vmethyltransf Peptidase_C34 RdRP_2 Viral_helicase1 2OG-FeII_Oxy AAA_30 AAA_14 2OG-FeII_Oxy_2 AAA_19 Motif Other DBs NCBI-GeneID:  1493999 NCBI-ProteinID:  NP_040551 RS:  NC_001409 UniProt:  P27738 LinkDB All DBs Position NC_001409:152..5806 Genome browser AA seq 1884 aa AA seqDB search MAFSYRTPQEELLSRLPQSQQEVISGFQYERIQKEEEKKVENFSFYLPEKTREWFTKSGV YLSPFAYVNHSHPGCKTLENHLLFNVVASYISKYSYVACLSIKSNKMSKMERLGPNSVKT YDILNRLVTAKDKARYGPLAKPERSPCPKKTNIFIHDEIHYWSRDQLETFLQVHRPKNLW ATLVFPPEILAGYKSSVLPFLYQFEIHGKDLVYMPDGVRSESYTQPLENGFLLSSSSIII KNRVTGVEIRYQVSLVYSLGSHHLFHIYPAEDLMKEEVRRFGPYDLFDVGSLFVKPVRVP IQDFPLSVFKKIFIYMSSLKKPDVQSAVAKLRQLSDADISIESVFMIQEFASRIEKNGVE SWSCSFWGCMKDWFFDKLPYREVLEKIGLADDFTRRLMKIKPLAFDIHTTDRPLTVRMII DQIWEERLSSFDNISNIVFYGRREWLNNGVLPKVKKKGLAKLIPGREVDSHNYPREIYSD LLSSTSIWRSYDDDFRHRSASPLVILRSNRAYSEAAKFSSNCLSLCAAPCDEVIARTPFE LNHRREKKELSLKCLDFHIKKMKVKNVLELEVKLRERNTRISLSKKGVKKAGRSRMIPVH LLKPTCGEGNGKPEERNKEEAKIPMNEGTSKEEKGSEPPHSEVKREGVRLDEQHISEPLL SFKLDDFVGREKLCSAGLIKTVGNDYLLLARQIECMPLSQLRGKKAAYFCLDFPMVYFHD KVSYPTFEATGEIRHVMMKARSKWGIDFNSALIQVYNDGCRLPLHSDNEECYDDDGILTI NVVGDAKFHTTCHDEVIDLKQGNEILMPAGYQKKNRHAVEVASEGRTSVTLRVHKRDFSF ESKLRFIKGKFDCLFVSVAEIIHKKPEEIMMFIPHIMDRCVSNRGCSLDDAKAICEKYEI KIECEGDCGLVECGTSGLSIGRMLLRGNHFSVASVRRSSMDSLANSSKEIKSDGVLDHVT FNFHKRLKLVEPDLTNADIKVDSSRAGKLLKSLMDGMTGIVSHNSTHEGWRMIKGINSTS EMRSFMNMVRGQIEEPKSDLFDKVQELNFMKVKIYGIFGFAGSGKSHAIQNLIQTEFKGS QGIMVICPRRFLAKDWSEKGVDEKDIKTFESALKSDVKGKRLFILDEISLLPKGFTDLLM LKMHMEGILKKSTIVCIGDPLQAGYFCPKDDNYLSREGEIKRLFKGGVNYKWYSYRINKF IAKKLAIETMNDFIGIDEQSSIYKDMPSAHHFMEKKGNHIEVILVASMVEKELYSNYGNV MTFGESQGLTFNCGVIVLSEEAKLCSDAHIMVAITRFRRGFCFALGSKGSKEDYMRSMKS GLLQRICSGVGASKEFILGSSSVNLILSEKDIAKGAGIDEMDREARLEGDVWLKSMIYLG KRYHMVEPLGQVIKLTDDAIKCHIPVCSSQTLGPELDNIQAREYREFKGKNGWSNQFREE AGPNWKFPYKVNQAMSYEAVYPRHKMDDDLTFLAAIKKRLRFDNVANNYAKFKAAESRGK YLTKIFLKHVPIKCGRDQRLLDQCRQEFEETKLSKSAATIGAHSQRSDSDWPLDKIFLFM KSQLCTKFEKRFTEAKAGQTLACFPHKILVEFSPWCRYTEKVLTANLPDNYYIHQRKNFS ELEDFARRFSNGSICVESDYTAFDVSQDHTILAFEVELLRHFGWDDRVLQSYIKMKCTLG CRLGGFAIMRFTGEFSTFLFNTLANMVFTFCRYEVPDGTPICFAGDDMCALRNLREIDTH EFILSKLSLKAKVNRTKVPMFCGWRLCCDGLIKEPCLIYERLQVAIENGRLMDVIDSYFL EFSFAYKLGERLYSHLEIEQLNYHQVLTRFFIRNKHLLRGDSRHNISELEWLSDEDGDND KGSQIEDRRRGYSNCWGEKLQNLF NT seq 5655 nt NT seq  +upstreamnt  +downstreamnt atggccttctcttacagaacgccacaggaggaacttctgagcagactaccacagtcccaa caggaggtgatcagcggatttcagtacgaacgcattcaaaaggaggaagagaagaaggtg gaaaacttctctttttacctaccagagaaaaccagggagtggtttactaagtcaggtgtc tatctttcgcctttcgcttatgttaatcattctcaccctggttgtaaaactctggagaac caccttttatttaatgttgtagctagttatattagtaagtactcctatgtagcttgtctt agtattaaatctaataaaatgagcaaaatggaacgattgggtcctaattctgttaaaaca tatgatattttgaacagactggtgaccgctaaggataaagctcgctatggccctttggcc aaaccggagaggtctccatgcccaaagaaaactaacattttcattcatgatgagattcac tattggtcaagggatcaacttgagactttcctccaagtccacaggccaaagaatttgtgg gcaactttggttttccctccagagatacttgctggttacaaatcgtctgttttaccattc ctttatcagtttgaaattcatgggaaagacttggtttatatgcctgatggagtaagatct gaaagttacacacagcctcttgagaatggttttttactaagctccagcagcataatcatc aaaaacagagtcacgggggttgaaatcaggtaccaagttagtcttgtatattctctgggg tctcaccatctgtttcatatttacccagctgaggatctaatgaaagaagaggttaggaga tttgggccttacgacctttttgatgtgggttcactttttgtgaaaccagtgcgcgttccc attcaagattttccacttagcgtatttaagaaaatcttcatctacatgagctcactaaag aaacctgatgtacaatcagcagtggcaaagttgaggcagttgtctgatgccgacatttcc atagaaagtgtgttcatgattcaggagtttgcaagtaggatagagaagaacggtgtggag agttggtcctgctcattctggggatgcatgaaggattggttctttgacaagttaccatat agggaggtgttggaaaaaatagggttggctgatgatttcaccaggaggttgatgaagatt aaaccattagcctttgacattcacacaactgacaggccattgacagtcagaatgattata gatcagatctgggaagagaggctgagctcattcgacaacatttcaaatattgtcttctat gggagaagagaatggctcaacaatggagttttaccaaaagtaaaaaaaaaaggtttggcc aaattgattcccggaagggaagttgattcacacaactacccaagagagatatattctgat ttgctgtcatccacgtcgatttggaggtcatatgatgatgacttcagacacaggagtgct agccctttagtgatcttgaggtccaatagagcttactctgaagcagcaaaattcagctca aattgtctgagtttgtgtgcagcaccctgtgatgaagtcattgcaagaaccccttttgaa ttgaatcacagaagagagaagaaggagctatccctcaaatgcctggattttcatatcaag aaaatgaaggtgaaaaacgtgctcgagcttgaggtcaagctcagagaacgcaacaccaga atttctttgagcaaaaagggagttaagaaagcagggagatcaaggatgattccagtgcat ctgcttaaaccaacctgcggtgaaggaaatggcaaacctgaagagaggaataaggaggaa gcaaagattccaatgaatgaagggacaagcaaagaagaaaaggggtccgaacctccacat tctgaagttaaaagggaaggtgttagattggatgagcaacacatttcagaaccccttttg agttttaaattagacgacttcgtcggaagggagaaactttgttctgctggtttaatcaaa actgttggaaacgattatctcttgttagccagacaaattgaatgtatgccactttctcaa ctcagaggaaagaaagcagcatacttctgtcttgactttccaatggtgtattttcatgat aaagtttcttacccaacatttgaggcaactggggaaatcagacatgtcatgatgaaagca agaagcaaatgggggattgatttcaacagcgcactaattcaagtttataatgatggatgc aggttacctttgcacagtgataatgaggagtgttatgacgatgacgggatcctcaccatt aacgtcgtgggagatgcaaagtttcacaccacctgccatgatgaggtcatagatcttaaa caagggaatgagatattgatgcctgcaggttaccaaaagaaaaatagacatgctgtggag gtcgcttcagaaggaaggacaagtgttaccctcagggttcacaaaagggatttcagtttt gagtcaaagcttagattcatcaagggtaaattcgactgcctatttgtcagtgtggctgaa ataatacacaaaaaaccagaggaaatcatgatgttcatcccacacattatggacaggtgt gtgagtaataggggttgctcacttgatgatgcaaaagcaatatgtgaaaaatatgaaatc aaaatagagtgcgaaggcgattgcggcttggttgagtgtgggacatcaggtctttccatt ggaaggatgctgcttaggggaaaccacttttctgtcgcttcagttaggaggtcatctatg gattcgcttgctaactcatcaaaggagatcaagtcagatggagtcttagatcacgtaaca ttcaacttccacaaaagactcaaacttgttgaacctgatttgaccaatgcagacatcaaa gtggattcttcaagggcaggaaagctgctcaaaagtctgatggatggcatgactggaatt gtttctcacaattcaacccatgaagggtggaggatgatcaaagggataaacagcacctct gagatgagatcgttcatgaatatggtgaggggtcaaattgaagagcccaaaagtgatctg tttgacaaggttcaagaactgaactttatgaaggtgaagatttatggcattttcggattt gctggatcaggaaaaagtcatgcaattcagaatttaatacaaactgaattcaaaggttca caagggattatggtgatctgccccagaagatttttggcaaaagattggagcgaaaaagga gtggacgaaaaggacattaaaacttttgagagtgcattaaagtcagatgtcaaaggaaag agattatttatactggatgaaatcagtttgctccctaaaggtttcactgatcttttgatg cttaagatgcatatggaaggaatccttaaaaagtcaacaattgtttgtataggggacccg ctccaggctggatacttttgtcctaaggatgacaactacttgtctagggaaggagaaatt aaacggcttttcaaaggaggggtaaactacaaatggtacagttacagaattaacaaattc attgcaaaaaaactggccatagaaacaatgaatgacttcattggaatagatgaacaaagt tcgatctacaaagatatgccgtcagctcaccacttcatggaaaagaaagggaatcatata gaggtcatcttggttgccagtatggtggaaaaggaactttactccaactatgggaatgtg atgacatttggggagtcacaaggtttaacattcaattgtggagtaatagtactttccgag gaggccaagctgtgttccgatgcgcatataatggttgcaatcacaaggttcagaagaggc ttctgctttgcgttggggagcaaagggtcaaaagaagattatatgaggtcaatgaagagc ggtctgcttcaaagaatatgttcgggcgttggtgcttcaaaagaattcattttggggtcc tcctccgtcaacttgattttgagtgagaaagacatcgccaaaggagcagggattgatgag atggatagagaagctagactggaaggagatgtctggctcaagagtatgatataccttgga aaaagatatcacatggttgaaccacttggtcaagtgattaagctaactgatgatgcaatt aaatgccacattccggtttgttcaagtcagacactaggtcctgagctcgataacatccaa gcaagagaatacagagaatttaaaggaaaaaatgggtggtcgaatcagttcagagaagaa gctgggccaaattggaaattcccttacaaggtcaatcaagcgatgagttatgaggctgtg tatcccagacacaaaatggatgatgatctcactttccttgctgccataaagaagaggctt cgctttgacaacgttgccaacaattacgcaaaattcaaggcagcagagagcagagggaag tatctgacaaaaatctttctcaaacatgtgcccatcaaatgtggcagggaccaaaggctc ctggatcaatgcaggcaagaatttgaggagacgaaactatctaaaagtgcggccacaatt ggagcacactctcagaggtcagactcggattggcccttggataagattttcctgttcatg aaatcgcaactttgcacaaaattcgaaaaaagatttacagaagctaaggcaggccagact ttggcttgttttccacacaaaattctcgtggaatttagcccatggtgtcgatacacagaa aaggtgctcactgcaaacttaccggataattactacattcatcaaaggaaaaatttcagt gaattggaggattttgccagaagattttcaaatggttcaatatgtgtggaatcagattat acagcttttgacgtttcacaagatcacaccattttagcatttgaggtggaattgctcaga cattttggttgggacgacagagtccttcagagttacattaagatgaagtgtactttgggt tgcagacttggaggttttgctataatgaggttcactggggaattttcaacctttctgttc aatacgcttgcaaacatggttttcacattttgcagatacgaggttcctgatggaacccca atctgcttcgccggtgatgacatgtgcgctctgagaaacttgagggagattgacacccat gaattcatcttgagcaagctgagtttgaaggccaaggttaacagaacaaaagtgccaatg ttttgtggatggcgattgtgctgcgatggtttgatcaaagaaccttgcttaatctatgaa aggctgcaggtggcaattgagaatgggagattgatggatgtgatagactcatattttctg gagttttcattcgcctacaaattaggtgagaggctctattcacatcttgaaattgaacaa ctgaattatcatcaggttttaacaagattcttcataaggaataaacatctactcagaggg gattcaaggcataacatttctgaacttgagtggttgtctgacgaagatggcgacaatgat aaggggtcacagattgaggatcgcagaaggggatattccaattgctggggtgaaaagctc cagaatttattctga

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