Viruses: 1494009 Help Entry 1494009           CDS       T40000                                  Symbol ORF1, FoMVgp1 Name (RefSeq) Foxtail mosaic virus; replicase   KO K26615   Alphaflexiviridae RNA-directed RNA polymerase Virus 12179  Foxtail mosaic virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Vmethyltransf Viral_helicase1 RdRP_2 UvrD_C_2 AAA_16 AAA_33 Motif Other DBs NCBI-GeneID:  1494009 NCBI-ProteinID:  NP_040988 RS:  NC_001483 UniProt:  P22168 LinkDB All DBs Position NC_001483:81..4088 Genome browser AA seq 1335 aa AA seqDB search MSIEAVFDQVTDPSLRAVIQEEAHKQIKDLFKETTRCNPYSIPQAGRKVLEKYAIPYNPY SLKLHPHAASKAFEVSLYEAASNYLPSTSSTPVTFMFTKPGKLRFFRRRGHVDKFVNADI VPRDLARYPRDTVYSYLPEITTTHAFIGDTLHHFGEDFLVEVFSRSPKLEVLLATMVLPP EAFYRMESLHPSVYTLLYRDDRFLYLPGGLSGGEYEHRYKDLNWLTFGTVTHGGITITGE RIETKAANHLFLFRRGRLATPKFRSFDMPEPMVLLPKVFRPAKYNVQKPIPREKANKWLM YVKSIGNATIRDVWAKLRQTIANADIGLFSPTELVHLTNYFLLLGRLDSHNSFDQVLADS VLKAWFRPMVAKLQEIKHKLMGQTQFMQLCQALEMTEVDLVFEVRDSKTPHKQAVPLDRE IENVLLEGVSSEPTYTETEGVADGPLPPPMQTAAEPSATSDEPESSSSREIEHQPAPEIT LDEEEPQRDDLPWDAWRTQLRALGFEASERQYDPDGELISPILSTRRLPKTPIDTTLYAT LDKIARCPTFYKPDTDRAQTYARDVMAGKTGAILKQQPFEWKTTLKRKTKEEPKEIHLAV LHGAGGSGKSYALQEFMRNNSDTPITVILPTNELRADWKKKLPAHDKDTFMTYENALLCP RGDIFIMDDYTKLPRGYIEAFVQNAPALSLLILTGDPNQAEHFETTEDNEINSLAPASVV FGKFSRYHINATHRNPRNLANALGVYSETPGEVKVLYTRNIKTGYHNLVPSQMKMRNYAS LGQRASTYAGCQGITAPRVQIILDSDTPRCTRQVMYTALSRATTEVVLCNTMPDEKSFFQ KVEATPYLKAILNLNKEIKVTEGDLTEEPPREPAPPTTHLPVENRIILNEALVEPLPDKH DREIYSNSTGFSNCIQTQDPYIQAFQHQQAKDETLFWATVEKRLAASTPKDNWTEFKTKR PLGDVLWLAYKRAMVLPDEPIKFNPELWWACADEVQKTYLSKPIHALKNGILRQSPDFDW NKLQIFLKSQWVKKIDKIGKIDVNAGQTIAAFYQPTVMLFGTMARYMRRIRDTYQPGEIL INCEKNQKHISKWVESNWNHRLPAYTNDFTAYDQSQDGAMLQFEVLKALHHDIPHEVVEA YVALKLNSKMFLGTLAIMRLTGEGPTFDANTECNIAYTHARFEIPKNVAQMYAGDDCALN CRPVERQSFLPLVEKFTLKSKPKVFEQKVGSWPEFCGNLITPRGYLKDPMKLQHCLQLAQ RKKPSEPGSLKDVAENYAMDLLPTYELGDALYEIFDERQMNAHYQSVRTLITCAHTKVLR VAQALQEDCTFFSSI NT seq 4008 nt NT seq  +upstreamnt  +downstreamnt atgtctatcgaggcagttttcgaccaggttaccgacccatcgctccgcgctgtgattcag gaggaagcgcacaaacagatcaaagatttatttaaggaaacgacgcgctgcaatccctac tccataccgcaagctgggcgcaaggttttggaaaagtacgccatcccctacaacccgtac tctctcaaactacaccctcacgcagcctcaaaagcgtttgaagtgtcgctctacgaggct gcgtctaactacctcccctccacctcctcaactcctgtcacattcatgttcacaaaaccg ggcaagctcagattctttaggcgccgaggtcacgtggacaaattcgttaatgctgacata gttccaagagacttggctagatacccacgcgacacagtctacagttatctgcccgagatc accaccacacacgctttcattggcgacaccctacatcacttcggtgaggactttctcgtc gaggttttctccaggtcaccgaaactagaagtgcttctagccaccatggtattaccaccc gaagccttttacagaatggagtcccttcatccctcggtttacactctcctctacagggac gaccgattcctatacctgcctggtggcctgtctggcggtgagtacgaacatcgctataag gacctaaactggctaacatttggcacagttacgcacggcgggatcactatcacaggagaa cgcattgagactaaggccgcgaatcatcttttcctcttcagacgagggcgactagcgaca ccaaaattccgctcattcgacatgcccgagcctatggtcctgcttcccaaggttttccgc cccgcaaagtacaatgtacagaagccaattccccgggagaaagcaaacaaatggttgatg tacgttaaatccatcggcaatgccaccattcgtgacgtatgggctaagctgaggcaaacc atagccaatgcagacattggactcttctcgcccactgagctcgtgcatctcacgaattac ttcctgctcctgggccggcttgactcacacaattccttcgaccaagtactggccgacagt gtgctgaaagcatggttcagaccaatggtcgcaaagcttcaggagattaagcacaaactc atggggcagacccaattcatgcaactctgccaagcgctagagatgacggaggtggacctc gtctttgaggtccgggactccaagactccccacaaacaagctgtgccgttggaccgtgaa attgaaaacgttttgttggaaggagtctcatcggagccaacttacactgaaaccgaaggc gttgctgatggtccacttccccccccaatgcaaactgcagccgagccgtccgcgacctca gacgagcccgagagctctagctcgcgtgaaattgagcatcaaccggcgcctgagatcacg cttgacgaggaagaacctcagcgagacgatctgccttgggacgcttggagaacacaatta agggcgcttggctttgaggcctccgaaaggcagtatgacccggacggtgaactgatctct cctatcctgagcacccgaaggttgcctaaaactcccatagacacaacactctacgccacg ctagacaagattgcacgctgcccaactttctacaagcctgacacagatcgcgcgcagact tacgctcgcgatgtcatggcggggaaaaccggtgccattctcaagcaacaaccctttgag tggaaaaccacgctcaagcgcaagactaaagaggaaccgaaggaaattcaccttgcggtg ttgcatggtgcgggcgggtcgggcaaatcctacgcactgcaggaatttatgcggaacaac tctgacacaccgattacggtcatcctgccgactaacgagctcagggccgactggaagaaa aaattgcccgcccacgacaaagacacatttatgacatacgaaaacgcgctcttgtgccct cgtggagacatcttcattatggacgattacacaaaattgcccaggggctacattgaggct ttcgtgcagaatgcacctgccctctcacttctgatactcaccggtgaccccaaccaagcc gaacactttgagaccactgaggacaatgaaattaacagcctcgcccccgcctcagtggtc ttcggcaagttctctaggtaccacataaatgccacacaccgcaaccccagaaacttggca aacgccctcggtgtttactccgagacgcccggggaggttaaagtgctttacacgaggaac atcaagaccggttatcacaatctcgtgccctcacaaatgaagatgagaaattacgcctca ctcgggcagcgagcgtccacctatgcgggttgtcaggggatcaccgcgccccgcgttcaa atcatcctagactccgacacaccccggtgcaccaggcaagtcatgtacactgcactctca agggccacgacggaagtggtgctctgcaacacgatgccggatgagaaaagctttttccag aaggttgaagcaacaccgtacctcaaagccatcctcaacctcaacaaagagattaaagtc actgagggcgacttgacagaagaaccgccgagggagcccgctcctcccaccacacacctg cctgttgaaaacagaatcattcttaatgaggccctagtcgaaccgctgcccgacaaacat gaccgcgagatctactccaactccactggcttttcaaactgcatacagactcaagacccg tacatccaagccttccaacatcagcaagccaaggacgagacattgttctgggcaaccgtc gagaagaggctcgcagcatctacgccgaaggacaactggacagaattcaagaccaagaga cctctgggtgacgtgctttggctcgcgtacaagcgggcgatggtgctcccagatgagccc atcaaatttaacccagagctctggtgggcatgtgcagatgaggtgcaaaagacctacctc tccaagcccatacacgcgctcaagaacggaattcttcggcaatcacccgactttgactgg aacaaactgcagattttcctcaagtcacagtgggttaagaaaattgacaaaatcgggaaa attgacgtcaacgctggacagacaattgccgccttttaccaaccaactgttatgctgttt ggaaccatggcgagatacatgcgccgcatccgcgacacttatcaacccggcgaaatactc atcaattgcgagaagaaccagaagcacatttcgaagtgggtcgagagcaattggaaccac cgcctacctgcttacaccaatgacttcactgcttacgaccaaagccaagacggggctatg ttacagtttgaggtactgaaagccctgcaccatgatatccctcatgaggttgtggaagct tacgtagcccttaaactcaactcaaaaatgtttctgggcacactggcgattatgagatta actggtgagggacccaccttcgacgctaacacagagtgcaacattgcttacacacacgcc cggttcgagatcccaaagaatgtggcgcaaatgtacgcgggtgacgactgtgcgctcaac tgcaggcccgttgaacggcagtccttcctgcctcttgtggagaaattcaccctgaaatca aaacctaaagtatttgagcaaaaagttgggtcatggcctgagttctgcggcaatctgatc accccacggggctacctcaaggatcccatgaagctacaacactgcctgcaactggcacag aggaagaaaccatccgaacctgggtcgcttaaagacgttgctgagaactacgctatggac ttgctacccacatacgagctaggtgatgcactctacgaaatcttcgacgagagacaaatg aacgcgcactatcagtcggtcaggacgcttatcacatgcgcccacaccaaagtcctccga gttgcacaggcacttcaggaagactgcaccttctttagctccatctaa

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