Viruses: 1494016
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Entry
1494016 CDS
T40000
Symbol
NMVgp1
Name
(RefSeq) Narcissus mosaic virus; replicase
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
12180
Narcissus mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
Cupin_2
HEPN_Swt1
Cupin_3
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
1494016
NCBI-ProteinID:
NP_040778
RS:
NC_001441
UniProt:
P15095
LinkDB
All DBs
Position
NC_001441:81..5012
Genome browser
AA seq
1643 aa
AA seq
DB search
MAKVRAALERIRDPSVQTALSEAAYTHVRPVLKESLVNCPYALSNDEADCLESFGITVNP
YANQTHTHAACKVIENRMLEIVGMHLPKHSCTMLFLKRSKLRYMRRAAILKDVFLNKDVE
PKDLFRYDRDTIRSRLQDIDTKIAYMSDTLHFMSRREIVQLFEDSPKLETLLATVVLPVE
ALHKRTSLYPSLYSINYSAKGFEYIPGNHGGGSYFHPYTTLEWLKVRMINAEDFHKLSTG
FILTFQLVESLGANHLFIVQKAKLLTPQMRTFCRDSLVTLPQVFCPAAMNANRPLSKTKA
MQMLLYCKSVKQVTERDIYAKIRQIIPTSELELYDPDEIVHLANYFFFVSSLDSITCYED
LLSSDIWMRLTRPLRTAVRKFVELFKGKQDFDKLLIALKWQPFSYSLEPVDFTAYFVSRR
VRTLAKMEDISWHQAAELARRLESEPDLLSWEDLCSKPIADPLASVSTPPLATLTSPAIS
ESRVTDTSSPKLTNISVESILHPTSSNHATIAESLNPKFCGWTRGDFHHMIVNQPSDRLK
GCRSWSYTTSPDVDLMLENLLLTPIPWESRLSDILLTLNTPANACCIQILDCSAASAWVD
WSVQPIKTFPVAFVGMGETTLTFEDDSTLPLKEGEFVFFPPEWLARHKYQIKTASNLHLC
ATFLVLDTTLLGETLANNCIEPEPLRPTASRKSCQPTPSVDKSGADSPPEKQIVTPIVDA
AVLSCRPKLQDVTKPTKVLMAAETSDSVADSLPWASWVNLLQKHGFKGNQQQIAQDGQLI
IPISDIRKLPHIPFPEEVPETLRETLKNIKRFPVEITMQHKRAGSYDSDIKNNRTGKLLS
QMDNKWKAAFAYKLQQEDRKVCGTIIHGCGGSGKSFAIQEWMRSLKEDQSVVTVVTPTVL
LRNDWQTKLPILPADVFKTFEKSVIQPCNPILVFDDYTKLPPGLIESVVMHHQNVVFIIL
TGDNRQSVYHETNPEAYIAALPEAVEIFSPYCEFYLNATHRNVKDLANKLGVYSEREGKL
KVNFASHHLKASRIPMLVPSTMKRNAMFDMGHHSMTYAGCQGLTAPKIQILLDNHTQFCS
ERVLYTCLSRAVDRIHFINTGPTTGDYWAKLESTPYLKAFIDTYRDEKTEVYNSQPASAE
PTEPEAPATHFPTAPKPLLEPLVEKLTDKEAREIFSPAFGHSNAIQTEDSVVQLFQHQQA
KDETLYWATIDTRLAISTPEANLREFNMKRDIGDILFMNYAKLMCLPPEPVPFEERLWKI
SADEVRNTYISKPIGNLVNAASRQSPDFPKNKIALFLKSQWVKKTEKLGTLKVKPGQTIA
SFMQETVMLYGTMARYLRKMRRRFQPDNIFINCETTPEDLDKFIKSQWDFSRPAHTNDFT
AFDQSQDGAMLQFEVIKAKFFNIPAEIIEGYIYIKLNAAIFLGTLGIMRLSGEGPTFDAN
TECSIAYNATRFHITDDTAQVYAGDDMALDRVSIEKDSFNRLEKQLKLTSKPMFPKQVKG
DYAEFCGWVMTPAGIIKHSLKMHASIQLQKKINNIKESARSYALDLRYAYKLGDELQEHL
NEVEADYHQQSVRDMHLLHQQDVLNKGSASPPHVFEKTADANTAGSSKTHKRNALKKKKQ
TRIAEILPSPDATGLSSLPFRFF
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtacgtgccgcgttggagagaattagggacccatcggtgcaaaccgcttta
tctgaagcagcttacacacatgtccgccccgttctcaaagaatccctagtcaactgcccc
tatgccctttctaacgacgaagctgattgcttagaaagttttggcattactgtaaatcca
tatgctaaccaaactcacactcacgcagcatgtaaagttatagagaatagaatgttagaa
atagttggcatgcacttacctaaacactcatgcaccatgcttttcctgaaaagaagcaaa
ttgcgatacatgcggagggcagctatacttaaagacgtctttctcaataaagacgttgaa
cctaaagacctgtttcgctacgatcgtgatacaataagaagtagactgcaggatatagac
accaaaattgcatatatgtctgacactctgcatttcatgtctcgcagggaaatagtgcag
ttatttgaggattcaccgaaacttgagacactactcgccactgttgtgctaccagtcgaa
gcccttcacaagagaacatcgctctacccgagcttgtactcgatcaactactcagctaag
ggcttcgaatacataccaggcaaccatggcgggggttcttatttccatccctacacaacc
ctcgaatggctcaaggtgcgtatgatcaacgctgaagacttccataaactctcaaccggg
tttattttaaccttccaacttgtggaaagcttaggtgctaatcaccttttcatagtgcag
aaagccaaactcctaacgccacagatgcgcactttctgtcgtgacagcttggtcacactc
ccacaagttttttgtccggcagctatgaacgctaatagacctctctccaaaactaaagct
atgcaaatgctattatattgcaaatcggtcaagcaagttaccgagagagatatctacgca
aaaattaggcaaatcattcccacaagcgagctcgagctgtacgatcccgatgaaattgtg
catttggctaattattttttctttgtttctagcttagattcaataacttgctacgaagat
cttctctcatcagacatctggatgagactcactaggccactcaggacagcggttcggaag
ttcgtcgaactctttaaaggcaaacaagactttgataagttattgatcgctcttaaatgg
caacccttctcctactcattagagccagttgacttcacggcatacttcgtaagccgtcga
gtacgcacactggctaagatggaggacatatcatggcatcaagctgctgaactggcccgt
cgtctcgaaagtgaacccgacctcctctcttgggaagatctttgttccaagcccattgct
gatcccctcgctagcgtctccaccccacctctcgctacgctcacctcgcctgccatctcg
gaaagcagggttactgacacctcttcccccaaactaactaacatttcagtcgaatccatc
ctccacccaaccagctctaaccacgccaccatagctgaatccctaaatccaaaattctgt
ggatggactagaggggactttcatcacatgatcgttaaccaacccagtgacagactcaaa
ggttgccgatcatggtcttacaccacttcacctgacgtggacttgatgttggaaaatctt
cttctaactcccatcccctgggaatcaagattgtccgacattttactcacacttaacacc
cctgctaacgcttgctgcatccaaattttagactgctcagcagcgagtgcctgggtcgat
tggtcagtccaaccaatcaagactttccctgttgcttttgtggggatgggtgaaaccaca
ttaactttcgaagacgactcgaccctaccactgaaagagggcgagttcgtgtttttccca
cccgagtggttggcccggcataaatatcagatcaaaactgcgtcgaatctccacctgtgc
gcaacttttcttgtgttagacacaactctacttggtgaaacccttgccaacaattgtatt
gaaccagaaccactcaggcctaccgcctcccgcaaatcatgtcaacccactccatcggta
gacaagagcggagctgactcaccacctgagaaacaaatcgtcacacccatcgttgacgcg
gccgtgttaagttgtcgacccaagctgcaagatgtgaccaaacccaccaaagttctaatg
gccgctgaaacctctgattcagtggctgactcgctaccgtgggcaagctgggtgaacttg
ctacagaaacacggtttcaaagggaatcaacaacagattgcacaggatggacaacttatc
attcctatcagtgacatccgcaagctaccacatatccccttcccagaggaagtaccggaa
acactgcgagagactctcaaaaacatcaaacgtttcccagtcgaaataacaatgcaacat
aaaagggctggctcctacgactctgatatcaagaacaatcggactggcaagttgctgtct
cagatggacaacaaatggaaggccgcttttgcgtataagctgcaacaggaggacaggaaa
gtttgcggtacaatcattcacggctgcggaggctccggcaaatcctttgccattcaagag
tggatgcgatctttgaaggaagaccagtcagtggtcacagtcgtcacaccaacggttttg
ctgagaaacgactggcaaacgaagttacccatcctgccggcagatgttttcaaaactttc
gagaaatcggtgatccaaccctgcaatccaattttagtgtttgatgactacacaaaattg
ccacctggattgatagagagtgtagtcatgcatcaccagaacgttgttttcatcattctc
actggagacaaccgacagtccgtttaccacgagaccaacccggaagcgtacatcgcagcg
ttacctgaagcggtagagattttcagcccctactgtgagttctacctcaatgccacccac
cgaaacgttaaagacctagccaacaagctgggtgtttactctgaaagggagggcaagttg
aaagtaaacttcgcttcacatcacctcaaagcttctcgaatcccaatgttggtgccttca
actatgaaacgcaatgcgatgttcgatatgggccaccacagcatgacgtatgccggctgc
caaggtcttaccgccccaaaaatccaaatcttgctcgacaaccacactcaattttgttca
gagcgggttctctatacttgcttgtctcgtgccgtcgacagaattcatttcatcaacaca
ggacccacgacaggagactattgggcgaaattggaaagcactccctatctcaaggctttc
atagacacttacagggacgagaaaacagaagtctacaattcccagcccgcgagtgccgaa
ccaaccgagcctgaagcacccgccacgcattttcccacggcaccgaaaccccttcttgag
ccgctagtggagaaattgaccgataaagaggcgagagaaatcttttcacctgctttcggc
cactcaaacgccattcaaacagaagattctgttgttcagctgttccaacaccagcaagcg
aaagacgaaactctttattgggccaccatcgacacaagattggctatctccacgcctgaa
gcaaatttaagggagttcaacatgaaacgtgacattggcgacattctgttcatgaattac
gccaaactgatgtgcttgcccccagagccagttcccttcgaagagaggctatggaaaatc
tcagctgatgaggtccgcaatacttatattagcaaacccatcggcaatctggtgaatgct
gcttctcgtcaaagcccagactttccgaagaacaagatcgctctgtttctgaagtcacaa
tgggtgaagaagacagaaaaactgggaaccttgaaagtcaagccaggacagaccatcgct
tctttcatgcaagaaactgtcatgctctatggcaccatggcgcgctacttacgtaagatg
cggagaagattccagcctgacaacattttcatcaactgcgaaactaccccagaagacctg
gataagtttattaagagtcagtgggatttctccagaccagcgcacaccaatgacttcact
gctttcgatcagtcacaagatggcgccatgctgcagtttgaagtgattaaggcaaaattt
ttcaacatacctgctgagatcatcgagggctacatctacatcaaactcaacgcagccatt
ttcttgggcaccttgggcatcatgcggctcagtggagaaggaccaacatttgacgccaat
actgaatgttcaatcgcctacaacgccaccaggtttcatatcactgatgacacagctcaa
gtctacgcaggcgatgacatggcgttggaccgggtgagcattgaaaaagacagcttcaat
agattagagaaacagctgaagctcacatcgaaaccgatgtttcctaaacaagtcaaaggg
gattacgcagaattttgtggttgggtcatgactcccgctggcatcatcaaacattctttg
aaaatgcatgcttccatccaactacagaagaagatcaacaacatcaaagagagtgctaga
tcctacgcacttgatctgcgttacgcgtacaaactgggagacgagctgcaagaacattta
aatgaggtagaagcggactaccaccagcaatctgttcgcgacatgcacttgcttcatcag
caagatgtgttgaacaaaggtagtgccagtccgccacatgttttcgagaaaacggccgac
gccaacactgcgggaagctcgaagactcacaagcgaaacgcgctgaagaagaagaagcag
actcgaattgcagaaattcttccgagtcctgacgctaccgggttaagttcattgcctttt
cgttttttttga
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integrated database retrieval system
