Viruses: 1494026 Help Entry 1494026           CDS       T40000                                  Symbol PapMVgp1 Name (RefSeq) Papaya mosaic virus; replicase   KO K26615   Alphaflexiviridae RNA-directed RNA polymerase Virus 12181  Papaya mosaic virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Vmethyltransf Viral_helicase1 RdRP_2 2OG-FeII_Oxy 2OG-FeII_Oxy_2 FtsK_SpoIIIE AAA_33 Motif Other DBs NCBI-GeneID:  1494026 NCBI-ProteinID:  NP_044330 RS:  NC_001748 UniProt:  P20951 K4NQ76 LinkDB All DBs Position NC_001748:100..4743 Genome browser AA seq 1547 aa AA seqDB search MANLRSVFEQLNDVSLRAVIQEEAYRDIKLTIKETKTYNPYAHPVAVADSLEKLGIETNP FAVKAHTHAAAKTIELDMYKIVSFYLPKENPTTFMFMKRSKLQYFRRGPQQKDVFLNAHI EPKDVARYDVDTLFDKNVTPQITTNTAFMGDTLHFLPLTAIERIFKSSPKLQTLYATMVL PPEALHRLHSLHPGIYELEFHQEHFIYKPGGHAGAAYIHKYEQLEWIKVGRFKWADEKGL THMVTSQILETKGANHLFIFQRGRFLTPELRCFSTETKYVTMPPIFLPKQFNARLPIKKT TAQQLFLYVKSVKNVTERDIWAKMRQLLKTSELQDYNPREVTLLVNYFLLIARLRSETCF DNVLSGGMFKKLFKPFIAWWEIQKHKIFGNEEFEQLMEALEWVDVTLTYPTKTFDNRGWV VKLEARRGYEWFADEMHKPKGPELNLEEKKTDPDAASYEKYLKALSLLQKEPEVMEAKEA EATDEPQRPEVKEEQAEASTSGRAEEIQEDPATKKGKEEPNPNRDLLCPCGLHLKIKNAE FPELPVLDHPDHLTGRKAWFFSKDGKPYSYTGGSHASRGWPNWLEKILAAIEIKEPLPEF NQCLVQQFKLQAAIPFHRDDEPCYPKGHQVLTINHSGECLTQIACQKGKASITMGFGDYY LSPVGFQESHKHAVSNTTGGRVSLTFRCTVQQNKFNDDGSMEALDNLPWKAWIPKLQNLG FQGRQLQYDPNGALISPIEEIRSMPKCKPEGVPEVVYKTLDGLARAPTPYSPNPIRARAY TSDVKNCRIGALLRQQGKEWGCRFDALVEAGKRELAISVIHGAGGSGKSQALQTLIKDNP ELDITVVLPTNELRLDWLRKLPKAPQEKFKTFEKALLAPPTPIVIFDDYGKLPAGYVEAF CLYFSTVQLIILTGDCKQSVHHESNENATTSSIEPLVKEASELCRYYINATHRNKKDLAN KLGVYSEKTGLTEVTHGTTPIPGLHMLVPSLYKKQAFSEMGHKVSTYAGCQGITAPKIQI LLTEETSLCSREVLYTALSRAVHSIHFVNASPNNQAFWKKLECTPYLKAFLSTLREEVAQ PIEEKKAEPTPVEPPRTHIAKEDAMVEYENVIEKMPEKHEREIFSEKHGHSNCVQTEDPF IQMFSHQQAKDDTLLWATIEARLVISNPKANWQEYLEKRPVGEVLFESYKRAMHLPKMPI PFEEDLWNSSMHEVQKTYLSKPENMIKNGMARQSPDYDPNVISLFLKSQWVKKMEKLGAI KIKPGQTIASFHQATVMLFGTMARYMRRMREVFQPAHIRINCEMTPEDLSSWAAGEGGHW KFKGPSLANDFTAFDQSQDGAMLQFEILKARHHSIPEDILDAYLTIKTNSKIFLGTLAIM RLTGEGPTFDANTECNIAFTHTKFNIPEGTAQLYAGDDSAIDGLPALRPSFKMIEQKLTL RSKPQVALQQKGDWAEFCGFRITPKGLIKDPKKLHASWMLEKKKGNVKNVLRSYELDLAL AYQHKDSLHELLSEEELKYHYETVRSIVKSGGGGVLNTYISKDESLY NT seq 4644 nt NT seq  +upstreamnt  +downstreamnt atggcaaatttgaggagtgttttcgaacagttgaacgacgtctcactccgggctgttatt caagaagaggcctacagagacattaagctcactattaaggaaactaaaacctacaatcct tatgcacatccagtagcagtagcggatagtttagaaaaattaggaatagaaactaacccc tttgccgtcaaggcgcatacgcatgccgcggcaaagacaatagaattagatatgtacaaa atagtttctttctacctcccaaaggagaaccccaccacctttatgttcatgaagaggagc aagttgcaatattttagaagaggcccacagcaaaaagatgtgttcctcaatgctcacata gaacccaaagacgtggctaggtatgacgtggacaccctttttgacaagaacgtgacccca cagattaccacaaacacagcctttatgggggataccctccattttcttccactaacagcg attgaaaggatctttaaatcctcccccaaacttcaaaccctctacgccactatggtactc ccaccggaggccctgcatagactgcattctctgcaccctggtatatatgaattagaattt caccaagaacatttcatctacaaaccagggggtcatgctggggcagcgtacatccacaaa tacgagcaactcgagtggattaaagtgggaaggtttaagtgggcggacgagaaggggctc acccacatggtgacctcacagattttggaaactaaaggtgccaaccacctcttcattttc cagagagggaggtttctgactccagaattgaggtgtttcagcactgagacaaaatatgtc accatgcctcccatcttcctccccaagcagtttaatgcccggttgccaattaagaaaacc accgcccaacaattgtttctctacgtaaaatcagtgaaaaatgtaacagagagggacatc tgggcaaagatgagacagttgctcaagacttcggagctacaagattacaatccaagagag gtgactctgctggtgaactattttctcttgattgccagattaaggtcggaaacgtgtttt gacaacgtcctcagcgggggaatgttcaagaaactcttcaaacccttcatcgcatggtgg gagatccaaaaacacaaaattttcggaaatgaggagtttgaacagttgatggaagctctg gagtgggtggatgtaacactgacctacccaacaaaaacttttgacaatcggggttgggtg gttaagctggaagcgaggaggggttacgagtggttcgctgatgagatgcacaagccgaag ggtccagaactaaacttggaggagaagaaaacggatccggacgccgcatcctacgaaaaa tacttgaaagccctgagccttttacagaaagaaccggaggtcatggaagccaaagaagca gaggcaacagatgaaccccaaaggcccgaagttaaggaagagcaggcagaggcttccacg agtgggagggctgaagaaattcaagaggatccggcaaccaagaaagggaaggaggagccg aaccccaatcgggacctgctctgcccatgcggactacatctaaagatcaaaaatgccgaa tttcctgaacttccggtactcgatcatccagatcatctcaccggaagaaaagcatggttc ttctcaaaggatggaaagccatactcctacacaggaggctcacatgcatctcgaggctgg ccaaattggctggagaaaattttagccgcaatagaaatcaaagagccactgccggaattc aaccaatgcttagtccagcagtttaaactccaagcggccatcccattccaccgagatgat gaaccgtgttatccaaagggtcaccaggttctcaccatcaaccactcaggggaatgcctc acccaaatagcttgccaaaaaggaaaggcaagtataactatgggattcggtgactactac ttgagcccagtgggattccaagagtcccacaagcatgcggtaagcaacaccacaggggga agggtgtctctgactttcagatgcacagtccagcaaaataaatttaatgatgatggaagt atggaagcccttgataaccttccttggaaagcgtggatcccgaaactgcaaaatttagga ttccaaggaaggcagcttcagtatgatcctaatggagcactgatcagccccattgaggaa attcgaagcatgcccaagtgcaagcctgaaggggttccagaagtagtttacaagacgctg gacggactagcccgtgcgccaactccatattctccaaaccctatccgagctagagcatac acctcagatgtcaaaaactgcagaattggggccctgctaaggcaacaaggtaaggagtgg ggatgcaggtttgacgcattggtagaagctggcaagagagagttggccatctccgtaatt cacggagcgggaggaagcgggaagtcacaagcattgcagaccctgattaaggacaaccca gagcttgatatcacggtggtcctcccaaccaatgaactcaggctggattggcttcggaag ttaccaaaagccccgcaggaaaagttcaaaaccttcgaaaaggcattgttagctcccccc accccaatagtcatcttcgatgattatggcaaactaccggcaggctacgtggaagccttc tgcttgtacttctccactgtacaactgatcatcctaaccggagattgcaaacagagtgtg caccatgaaagtaatgagaatgccacaacaagctcaatagaacccctggttaaagaagcc tcagagctttgcaggtattacatcaatgccacacacagaaataagaaagatctggccaac aaactgggagtttactcagagaaaaccgggttgaccgaagtgacccatggcaccaccccg atccccgggcttcacatgctagtgccctcgctttacaaaaagcaagccttttcagagatg ggacataaggtgtccacctacgcgggctgtcaggggatcaccgctccaaaaatccaaatc ttgctaacagaggaaacctctctctgctccagagaggtcctgtacactgcactatcgagg gccgtacattcaatccattttgtaaacgcgagcccaaacaatcaggctttttggaaaaaa ctggagtgcactccatacctcaaggctttcctgtcaactttgagagaagaagtggcacag cctattgaagagaagaaagctgaacccactccagtagagcccccacgaacacacattgca aaggaagatgcaatggtggaatatgaaaacgtcatcgagaaaatgcctgaaaagcatgaa agggaaattttctcagaaaaacacgggcacagcaactgtgttcaaaccgaagaccccttc attcagatgttttctcaccaacaggcaaaagatgacaccctactttgggctaccattgaa gccagattggtcatctccaacccaaaggccaattggcaagagtaccttgaaaagaggcca gtgggagaagtgctgtttgaatcatacaagcgggccatgcacttgccaaagatgcccatt ccctttgaggaggatctttggaactcgagcatgcatgaggtgcaaaagacctacttgtcc aagcctgaaaacatgatcaagaatggaatggccaggcagagccccgactatgacccaaat gtgatctccctgttcctgaagtctcagtgggtgaagaaaatggaaaaattaggggcaata aagatcaaacccggtcaaaccatagcctcttttcatcaagccactgtaatgctctttgga actatggcaagatacatgaggagaatgcgggaagtcttccaacctgcccacatcaggatt aactgtgagatgaccccggaagacctgagctcttgggcggctggagaagggggacactgg aagtttaaaggcccttcacttgccaatgacttcacagcatttgaccagtcacaagatggt gctatgctacagtttgaaattcttaaagctaggcaccactccatcccagaggacattttg gacgcgtacctcacgataaaaactaactcaaagatattcctgggaacattggcaataatg agattgaccggtgaggggcccactttcgacgcaaacactgaatgcaatatcgccttcaca cacactaaattcaacattccagaaggcacagcacaattgtatgcaggggatgactcagca atcgatggtttgcctgcactaagaccaagctttaagatgatcgaacaaaagctcaccttg aggtccaaaccccaggtagcccttcaacaaaaaggagactgggcagagttctgtggcttc cgaatcaccccaaaagggctgatcaaggaccccaagaaactccatgcctcttggatgcta gaaaagaagaaggggaatgttaaaaacgtattgagatcatacgagcttgatttggcgtta gcataccaacacaaggatagcctgcacgaactactttccgaggaggagctcaagtaccac tacgagacggttcgttccatagttaagtcaggaggaggtggagttttgaatacttacatc tccaaggatgaatcactttattaa

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