KEGG   Viruses: 1494043
Entry
1494043           CDS       T40000                                 
Symbol
PRSVgp1
Name
(RefSeq) Papaya ringspot virus; polyprotein
Virus
12205  Papaya ringspot virus
SSDB
Motif
Pfam: Peptidase_C6 Poty_coat RdRP_1 Poty_PP Potyvirid-P3 Peptidase_S30 Peptidase_C4 DUF3725 Helicase_C DEAD Peptidase_S76 Flavi_DEAD ResIII Atrophin-1 Cas3-like_C_2 DUF4145
Other DBs
NCBI-GeneID: 1494043
NCBI-ProteinID: NP_056758
RS: NC_001785
UniProt: Q01901
LinkDB
Position
NC_001785:86..10120
AA seq 3344 aa
MSSLYTLRAAAQYDRRLESKKGSGWVEHKLERKGERGNTHYCSEFDISKGAKILQLVQIG
NTEVGRTFLEGNRFVRANIFEIIRKTMVGRLGYDFESELWVCRNCDKTSEKYFKKCDCGE
TYYYSERNLMRTMNDLMYQFDMTPSEINSVDLEYLANAVDYAEQLVKRSQVPEPVELAMM
EPIVASGEGILMVSEPEVMPVTTKVEEAWTIQIGEIPVPLVVIKETPVISGVEGTLNSTG
FSLEADITKLVEKEILQEEVKEAVHLALEVGNEIAEKKPELKLIPYWSASLELHKRIRKH
KEHAKIAAIQVQKEREKDQKVFSALELRLNLKSRRRNQAVVCDKRGTLKWETQRGHKKSK
LMQQASDFVVTQIHCDFGCKTQYSEPHIPGIKQSTSKKICKPRKHSRIVGNSKINYIMKN
LCDTIIERGIPVELVTKRCKRRILQKEGRSYVQLRHMNGIRARQDVSSSPDMELLFTQFC
KFLVGHKPLKSKNLTFGSSGLIFKPKFADNVGRYFGDYFVVRGRLGGKLFDGRSKLARSV
YAKMDQYNDVAEKFWLGFNRAFLRHRKPTDHTCTSDMDVTMCGEVAALATIILFPCHKIT
CNTCMSKVKGRVIDEVGEDLNCELERLRETLSAYGGSFGHVSTLLDQLNRVLNARNMNDG
AFKEIAKKIDEKKESPWTHMTTINNTLYKGSLATGYEFERASNSLREIVRWHLKRTESIK
AGSVESFRNKRSGKAHFNPALTCDNQLDKNGNFLWGERQYHAKRFFANYFEKIDHSKGYE
YYSQRQNPNGIRKIAIGNLVFSTNLERFRQQMVEHHIDQGPITRECIALRNNNYVHVCSC
VTLDDGTPATSELKTPTKNHIVLGNSGDPKYVDLPTLESDSMYIAKKGYCYMNIFLAMLI
NIPENEAKDFTKRVRDLVGSKLGEWPTMLDVATCANQLVVFHPDAANAELPQILVDHRQK
TMHVIDSFGSVDSGYHILKANTVNQLIQFARDPLDSEMKHYIVGGEFDPTTNCLHQLIRV
IYKPHELRSLLRNEPYLIVIALMSPSVLLTLFNSGAVEHALNYWIKRDQDVVEVIVLVEQ
LCRKVTLARTILEQFNEIRQNARDLHELMDRNNKPWISYDRSLELLSVYANSQLTDEGLL
KQGFSTLDPRLREAVEKTYATLLQEEWRALSLFQKLHLRYFAFKSQPSFSEYLKPKGRAD
LKIVYDFSPKYCVHEVGKAFLLPVKAGAKIASRIINGCGAFIRKSAAKGCAYIFKDLFQF
VHVVLVLSILLQIFRSAQGIATEHLQLKQAKAEVERQKDFDRLEALYAELCVKSGEQPTT
EEFLDFVMEREPRLKDQAYNLIYIPVIHQAKSDNEKKLEQVIAFITLILMMIDVDKSDCV
YRILNKFKGVINSSNTNVYHQSLDDIRDFYEDKQLTIDFDITGENQINRGPIDVTFEKWW
DNQLSNNNTIGHYRIGGTFVEFSRVNAATVASEIAHSPEREFLVRGAVGSGKSTNLPFLL
SKHGSVLLIEPTRPLCENVCKQLRGEPFHCNPTIRMRGLTAFGSTNITIMTSGFALHYYA
HNIQQLRLFDFIIFDECHVIDSQAMAFYCLMEGNAIEKKILKVSATPPGREVEFSTQFPT
KIVTEQSISFKQLVDNFGTGANSDVTAFADNILVYVASYNEVDQLSKLLSDKGYLVTKID
GRTMKVGKTEISTSGTKFKKHFIVATNIIENGVTLDIEAVIDFGMKVVPEMDSDNRMIRY
SKQAISFGERIQRLGRVGRHKEGIALRIGHTEKGIQEIPEMAATEAAFLSFTYGLPVMTH
NVGLSLLKNCTVRQARTMQQYELSPFFTQNLVNFDGTVHPKIDVLLRPYKLRDCEVRLSE
AAIPHGVQSIWLSARDYEAVGGRLCLEGDVRIPFLIKDVPERLYKELWDIVQTYKRDFTF
GRINSVSAGKIAYTLRTDVYSIPRTLITIDKLIESENMKHAHFKAMTSCTGLNSSFSLLG
VINTIQSRYLVDHSVENIRKLQLAKAQIQQLEAHMQENNVENLIQSLGAVRAVYHQSVDG
FKHIKRELGLKGVWDGSLMIKDAIVCGFTMAGGAMLLYQHFRDKFTNVHVFHQGFSARQR
QKLRFKSAANAKLGREVYGDDGTIEHYFGEAYTKKGNKKGKMHGMGVKTRKFVATYGFKP
EDYSYVRYLDPLTGETLDESPQTDISMVQDHFSDIRRKYMDSDSFDRQALIANNTIKAYY
VRNSAKAALEVDLTPHNPLKVCDNKLTIAGFPDREAELRQTGPPRTIQVDQVPPPSKSVH
HEGKSLCQGMRNYNGIASVVCHLKNTSGKGKSLFGIGYNSFIITNRHLFKENNGELIVKS
QHGKFIVKNTTTLQIAPVGKTDLLIIRMPKDFPPFHSRARFRAMKAGDKVCMIGVDYQEN
HIASKVSETSIISEGTGDFGCHWISTNDGDCGNPLVSVSDGFIVGLHSLSTSTGDQNFFA
KIPAQFEEKVLRKIDDLTWSKHWSYNINELSWGALKVWESRPEAIFNAQKEVNQLNVFEQ
SGGRWLFDKLHGNLKGVSSAPSNLVTKHVVKGICPLFRNYLECDEEAKAFFSPLMGHYMK
SVLSKEAYIKDLLKYSSDIVVGEVNHDVFEDSVAQVIELLNDHECPELEYITDSEVIIQA
LNMDAAVGALYTGKKRKYFEGSTVEHRQALVRKSCERLYEGRMGVWNGSLKAELRPAEKV
LAKKTRSFTAAPLDTLLGAKVCVDDFNNWFYSKNMECPWTVGMTKFYKGWDEFLKKFPDG
WVYCDADGSQFDSSLTPYLLNAVLSIRLWAMEDWDIGEQMLKNLYGEITYTPILTPDGTI
VKKFKGNNSGQPSTVVDNTLMVLITMYYALRKAGYDTKTQEDMCVFYINGDDLCIAIHPD
HEHVLDSFSSSFAELGLKYDFAQRHRNKQNLWFMSHRGILIDDIYIPKLEPERIVAILEW
DKSKLPEHRLEAITAAMIESWGYGDLTHQIRRFYQWVLEQAPFNELAKQGRAPYVSEVGL
RRLYTSERGSMDELEAYIDKYFERERGDSPELLVYHESRGTDDYQLVCSNNTHVFHQSKN
EAVDAGLNEKLKEKEKQKEKEKEKQKEKEKDGASDGNDVSTSTKTGERDRDVNVGTSGTF
TVPRIKSFTDKMVLPRIKGKTVLNLNHLLQYNPQQIDISNTRATHSQFEKWYEGVRNDYG
LNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFRQIMAH
FSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKA
AALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGMRN
NT seq 10035 nt   +upstreamnt  +downstreamnt
atgtcttctttgtacactcttcgagcagcagctcagtacgataggaggttggaaagcaag
aaaggttctggttgggtcgagcacaaactcgaaaggaaaggtgagagaggaaacactcac
tattgtagtgagtttgacattagtaagggtgccaaaatcctgcaattggtgcagattggt
aacactgaagttggaaggaccttcctggaaggtaacagatttgttcgtgcgaatatattt
gagattatccggaaaaccatggttggtcgtctgggatatgatttcgaaagtgaactatgg
gtctgtcgcaactgtgacaaaacttctgaaaaatacttcaagaaatgtgactgtggggaa
acatattattattctgaaagaaacctgatgaggacaatgaatgacctgatgtatcagttt
gacatgacaccatcagagatcaattctgtcgatctcgaatatcttgctaatgcggtggac
tatgctgaacagttagtcaagagatctcaagttccggaacctgtggaacttgcaatgatg
gaaccaattgtggctagtggggaaggtattctaatggtttctgaaccagaagttatgccc
gtaactaccaaagttgaagaagcatggacaatacagattggggaaattcctgtcccactt
gtcgtcatcaaggaaacgccagttatcagtggtgtggaaggaactctgaactcaactggt
ttctcacttgaagctgatattacaaaactggtggaaaaggaaatccttcaggaagaggtg
aaagaagcagtgcacctggcactcgaagttggtaacgagattgctgagaagaagcctgaa
ctcaagctaataccatattggagtgctagccttgagttgcacaagagaattcgtaagcat
aaggagcatgctaagattgcagcaattcaagttcagaaggaaagagaaaaagaccaaaag
gtattctcagctctggagttaaggcttaacttaaaatccaggagaagaaatcaagctgta
gtttgtgacaaaagaggcacacttaaatgggagacccaaagaggtcacaagaagagtaaa
ttaatgcaacaagcaagtgattttgttgtcactcaaattcattgtgattttggttgcaaa
actcaatattctgaacctcacatccctggcattaagcaatctacatctaagaagatctgc
aaaccgcgtaagcattcgagaattgtcggtaatagcaagataaattatatcatgaaaaat
ctttgtgacacaattattgaaagaggcattcctgtggagcttgttacgaagcgatgcaag
agaagaattcttcagaaagagggtagaagctatgtgcagttgaggcacatgaatggcatt
cgtgcacgacaagatgtgagcagttcgcccgatatggagctgttatttacgcaattttgc
aaattcctggttggacataaaccactcaaatccaaaaatctgacgttcggttctagtggt
ctgattttcaagccgaagtttgccgacaacgtggggcgatatttcggcgactatttcgtt
gttcgaggacgtcttggaggtaagttatttgatggtagatcaaaactagcgagatcggtc
tatgccaaaatggatcaatacaatgacgtggctgaaaaattctggcttggttttaatagg
gcttttctgcggcatagaaaaccaacggaccacacttgcacgtctgacatggacgttaca
atgtgtggggaggtagcagctcttgcaactataatcctgtttccgtgccacaagataact
tgcaacacttgcatgagcaaagtaaagggaagagtaattgacgaagttggtgaggatttg
aattgtgagcttgaacgtttacgtgaaactctttcagcatatggagggtcattcggacat
gtctcaacattacttgatcaattaaacagagttttgaatgcgcggaacatgaacgatgga
gcttttaaagagattgcgaagaagattgatgaaaagaaagagagtccttggactcacatg
acaaccatcaacaacacgctctacaaaggttcgttagcaactggctacgaatttgagaga
gcatctaatagtctccgagagatcgttagatggcacctcaaaaggacagaatcaataaaa
gctggcagcgttgaaagttttagaaataagcgttctgggaaagctcacttcaacccagct
cttacgtgtgataatcagttggataagaatggtaatttcttatggggtgaaaggcagtac
cacgctaaaagattctttgccaactattttgagaagattgatcatagtaagggttatgag
tactatagtcaacgccaaaacccaaatggtatcaggaaaattgccattggtaatttggta
ttttcaacaaatttggagagatttcggcagcaaatggttgaacaccatattgatcaagga
ccaattactcgtgagtgcattgcattgcgtaataacaattacgtccatgtatgtagctgc
gtaactttagatgatggaactccagcgacaagtgagttgaaaactcctaccaagaatcac
atcgttcttggtaattctggtgatcctaagtacgttgacctgccgactcttgagtctgat
tcgatgtacatagctaaaaagggttattgctacatgaacatttttttagctatgctcata
aacatacctgaaaatgaggcgaaggacttcacaaaaagggttcgtgaccttgtgggttca
aaacttggagagtggccaacgatgctagatgtcgcaacatgcgcaaatcagctggtagtt
tttcatcctgacgcagccaacgcagaattaccgcaaattctagtggatcaccgacagaaa
acaatgcatgtcatcgattcttttgggtccgtggattctggatatcatatattgaaggca
aatacagtcaatcagctgatccaattcgctagggacccactcgatagtgaaatgaagcac
tacattgtcggcggagagtttgacccgactactaactgcttgcaccagttgattcgtgtc
atctacaagcctcatgaactccggagcctgctcaggaatgaaccgtacctaattgtgatt
gcattgatgtcaccaagtgtacttttgactttgttcaatagtggtgcggttgagcacgcg
ttgaattattggatcaaaagagatcaagatgttgttgaggtcattgttttagtggagcaa
ttatgcaggaaagtgacgcttgctagaacaatcctggagcagtttaatgagattcgtcaa
aatgcgagagatttacatgagctaatggatcgaaacaacaagccttggatttcatatgat
cgctcattagaactattgagtgtgtatgcgaattcgcagttgacggatgaaggtctactc
aagcaaggattttcaacattagatcctaggttgcgtgaagctgtggaaaaaacctacgcc
actcttttgcaggaagaatggcgtgcgttaagtttgtttcaaaagttgcacttaaggtac
tttgcgttcaaatcacaaccgtctttttccgagtatttaaagccaaaagggcgcgcagat
ttaaaaattgtatacgacttctcaccgaaatattgtgtacacgaggtcggaaaagcgttc
ctactgccagtcaaggctggggctaaaatcgcatcgcgaatcattaatggttgcggagct
ttcattcggaagagtgccgcaaaaggctgtgcttacattttcaaggatcttttccaattt
gtacatgtggtgttagttttaagcattttattacaaatctttaggagtgcgcaaggaatt
gccacagagcatctacaattgaagcaggcgaaggcagaagtggagagacagaaggatttt
gatcgtctggaggctctatacgctgaattgtgcgttaagagcggtgagcaaccaactact
gaagaatttcttgattttgtgatggagcgtgagccaaggcttaaggatcaagcttacaat
ttaatatacataccagtgattcatcaagcaaaatcagacaatgagaaaaagctcgagcaa
gtcattgcattcatcacattaattctaatgatgatcgacgtggataagagtgattgcgtt
tatagaatcttaaacaagtttaaaggcgtgataaattctagcaacacaaatgtttatcac
cagtctttagatgacattcgggatttctatgaagacaagcagttgactattgactttgat
attactggagaaaatcagatcaatcgaggacctatagacgttacgtttgagaaatggtgg
gataatcaattgtccaacaacaatacaattggccattatcgaatcgggggaacgtttgtt
gagttttcacgggttaatgcagccactgtggctagtgagatagctcatagtcctgagcgt
gagtttcttgttcgcggagctgttggtagtggtaaatcaacgaaccttcctttcttgctc
agcaagcatggtagtgtgttgttaatagagcccaccagacctctttgtgagaacgtttgt
aagcaattacgtggtgaaccattccattgtaatccaactattcgcatgcgcggattaacg
gcttttggttctaccaacatcacaataatgacaagcggattcgctttacattattacgct
cacaatattcaacaattgaggctctttgatttcataatctttgatgaatgtcatgtcata
gatagtcaagccatggccttctattgtctgatggaggggaacgctattgagaagaagatc
cttaaagtttctgctacgccacctgggcgtgaggttgagttttcaacacaattcccaaca
aagattgtaacggaacaatccataagctttaagcagttggttgacaactttggtactggt
gcgaacagtgatgtgactgcctttgctgataacatattagtttatgtcgcaagttacaat
gaagtggatcaactaagtaagctcttatccgataaaggctacttggtcactaaaatcgat
ggaagaacgatgaaagttggaaagactgaaatttccactagtggcacaaaattcaagaag
catttcatagttgccacaaatatcatcgagaatggcgtcacacttgacatagaagccgtt
atagattttgggatgaaggtagtacctgagatggattcagacaatcgcatgatccggtac
tcgaagcaagcaatcagttttggagagagaattcaaagacttggtcgagtgggaagacac
aaagagggaattgcacttagaattgggcacacagagaaaggtatccaagaaattccagag
atggcagctactgaagcggcttttctgagcttcacgtatggcctgcctgttatgacccac
aatgtagggttaagcttgctcaaaaactgcactgtgagacaagcacgcacaatgcaacag
tatgaactaagcccgttctttacacaaaatttagtgaactttgatgggacagtgcacccc
aagattgatgtcttgttacgtccctataagctgagagattgtgaagtcagattaagtgaa
gcagcaataccgcatggggtacagtctatttggttgtctgctcgggattatgaagcagtt
ggaggccgtctttgcctggagggtgatgtccgaataccattcctcattaaggatgttcct
gagcgattatataaagaattgtgggacatcgtgcagacctacaagcgtgactttacattt
gggcgaattaattctgtgtctgctggaaaaattgcgtacacattaagaaccgatgtgtat
tctattcctagaactctcataacgattgacaaactgattgaaagtgaaaacatgaagcat
gcccattttaaagccatgacaagttgcactggcctaaactctagcttctctctccttggt
gttataaacactatccagagtagatatctagttgaccactcagttgaaaatatcagaaaa
cttcaactggcaaaggcccagattcaacaacttgaagctcacatgcaggaaaacaatgtt
gaaaatttaattcaatctcttggtgctgtaagagctgtttaccatcaaagtgttgatgga
tttaaacacataaagcgagagttgggtttgaaaggagtttgggatggctcattgatgatt
aaggatgcgattgtatgcggtttcacaatggctggcggtgcgatgcttttgtaccaacac
tttcgtgataagtttacaaatgttcatgtgtttcaccaaggtttctctgcgcgacagaga
caaaagttaagatttaagtcagcagcgaatgctaagcttggtcgagaggtctatggagat
gatgggacaattgagcactattttggagaagcgtacacgaagaaaggaaacaagaaagga
aagatgcatggcatgggtgttaagacgagaaagtttgttgcgacatatggatttaaaccg
gaggattactcgtacgtgcggtacttggaccctttaacaggtgagactttggatgaaagc
ccacagactgatatctcaatggtgcaagatcattttagtgatattcggagaaagtacatg
gattcagacagcttcgataggcaggctttaatagcaaacaatacaattaaggcttattat
gtccgaaactccgcgaaggcagcattggaagtcgatctgacaccgcacaaccctctcaaa
gtttgtgacaataaattgaccattgcaggatttcctgacagggaagctgagctaagacaa
acaggcccgcccagaactattcaagtagatcaagtgccaccaccctcgaaatcagttcat
cacgaaggaaaaagtctttgtcaaggcatgagaaattacaatggcatagcttctgtggtt
tgccatttgaaaaacacatcaggaaaggggaagagcttgtttggaattggatataattca
ttcatcattaccaaccgacatttgttcaaggagaataatggtgaacttatagtgaaatcc
caacacggtaagtttattgtcaagaacaccacaacactccaaattgctccagttggaaag
actgatcttttaattattcggatgccgaaagattttcctccattccatagcagagctagg
tttagggccatgaaagctggggacaaggtttgcatgataggtgttgactaccaagagaat
catatcgcgagcaaagtatctgaaacctctatcatcagtgagggcacgggagattttgga
tgccactggatatccacgaatgacggtgattgcggtaatcctttagttagtgtttcagat
ggttttattgtcggcttgcatagtttgtcgacatcaactggagatcaaaatttctttgcc
aaaatacccgcacaatttgaagaaaaggtccttaggaagattgatgatttaacttggagc
aaacactggagctataatattaatgaactgagttggggagctctcaaagtgtgggaaagt
cggcccgaagcaatttttaacgcacaaaaggaagttaatcaattgaatgttttcgagcaa
agtggtggtcgttggctctttgacaaattacacggcaatttgaaaggagttagctccgct
cctagcaatttggtgacaaagcacgttgttaaaggaatttgtcctcttttcaggaactat
ctcgagtgtgatgaagaggctaaagctttctttagtccacttatgggtcactacatgaag
agtgttctgagcaaggaagcgtacattaaggatttattgaaatattcaagtgatattgtc
gttggagaagtcaaccatgatgtttttgaggatagtgttgcgcaagttatcgagctgtta
aatgatcatgagtgtcccgaacttgaatacataacagacagtgaagtgattatacaagcc
ttgaacatggatgcagctgtcggagccttatatacgggaaagaaaaggaaatattttgag
ggatcaacagtggagcatagacaagctcttgtacggaaaagctgtgagcgtctctacgaa
gggagaatgggcgtctggaacggttcgctgaaggcagaactgagaccagctgagaaagtg
ctcgcgaaaaagacaaggtcatttacagcagcccctcttgacacactattaggagccaaa
gtctgcgttgatgatttcaacaactggttttacagtaagaatatggagtgcccatggacc
gtcgggatgacaaaattttacaaaggctgggatgagttcctgaagaaatttcctgacggc
tgggtgtactgtgatgcagatggttcccagttcgatagctcattaacaccatacttgttg
aatgctgtgctatcaattcggttatgggcgatggaggattgggatattggagagcaaatg
cttaagaacttgtacggggaaatcacttacacgccaatactgacgccagatggaacaatt
gtcaagaaattcaagggcaataatagtggccaaccttcgacagttgttgataatacattg
atggttttaatcacaatgtattacgcactacggaaggctggttacgatacgaagactcaa
gaagatatgtgtgtattttatatcaatggtgatgatctctgtattgccattcacccggat
catgagcatgttcttgactcattctctagttcatttgctgagcttgggcttaagtatgat
ttcgcacaaaggcatcggaataaacagaatttgtggtttatgtcgcatcgaggtattctg
attgatgacatttacattccaaaacttgaacctgagcgaattgtcgcaattcttgaatgg
gacaaatctaagcttccggagcatcgattggaggcaatcacagcggcaatgatagagtca
tggggttatggtgatctaacacaccagattcgtagattttaccaatgggttcttgagcaa
gctccattcaatgagttggcgaaacaaggaagggccccatacgtctcggaagttggatta
agaagattgtacacaagtgaacgtggatcaatggacgaattagaagcgtatatagataaa
tactttgagcgtgagagaggagactcgcccgaattactagtgtaccatgaatcaaggggc
actgatgattatcaacttgtttgtagcaacaatacgcatgtgtttcatcagtccaagaat
gaagctgtggatgctggtttgaatgaaaaactcaaagagaaggaaaaacagaaagaaaaa
gaaaaagaaaaacaaaaagagaaagaaaaagacggtgctagtgacggaaatgatgtgtca
actagcacaaaaactggagagagagatagagatgtcaatgttgggaccagtggaactttc
actgttccgagaattaaatcatttactgataagatggttctaccgagaattaaggggaag
actgtccttaatttaaatcatcttcttcagtacaatccgcaacaaattgacatttctaac
actcgtgccactcattcacaatttgagaagtggtatgagggagtgaggaatgattatggc
cttaatgataatgaaatgcaagtgatgctaaatggtttgatggtttggtgtatcgagaat
ggtacatctccagacatatctggtgtctgggttatgatggatggggaaacccaagttgat
tatccaatcaagcctttgattgagcatgctactccgtcatttaggcaaattatggctcac
tttagtaacgcggcagaagcatacattgcgaagagaaatgctactgagaggtacatgccg
cggtatggaatcaagagaaatttgactgacattagcctcgctagatacgctttcgacttc
tatgaggtgaattcgaaaacacctgatagggctcgcgaagctcacatgcagatgaaggct
gcagcgctgcgaaacaccagtcgcagaatgtttggtatggacggcagtgttagtaacaag
gaagaaaacacggagagacacacagtggaagatgtcaatagagacatgcactctctcctg
ggtatgcgcaactaa

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