Viruses: 1494045
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Entry
1494045 CDS
T40000
Symbol
PSbMVgp1
Name
(RefSeq) Pea seed-borne mosaic virus; polyprotein
Virus
12208
Pea seed-borne mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Peptidase_C6
Poty_coat
RdRP_1
Poty_PP
Peptidase_S30
Potyvirid-P3
Peptidase_C4
Helicase_C
DEAD
Flavi_DEAD
Trypsin_2
ResIII
Cas3-like_C_2
Trypsin
Motif
Other DBs
NCBI-GeneID:
1494045
NCBI-ProteinID:
NP_056765
RS:
NC_001671
UniProt:
P29152
LinkDB
All DBs
Position
NC_001671:144..9764
Genome browser
AA seq
3206 aa
AA seq
DB search
MSTLVCQAVAAPVWSNGARTRRIRDADGEYRCTQCDMGFDSMTMARPVNHCCDGIMIDEY
NLYDDDPIMHLVDSKTPIKRGSQETEGDGMAAEAIKVTGAEPVNCFMVGTIKCKINENSI
VAKGVMAAIPRQLTQDEVFMRKARLQAAVAKSTIEREEKERQFAFSKLEEKLRARREKLK
DGIVIKTRKGLEWREATPNQQRGKLQSTSFDASGGKTLTPHTIYCKTKSSKFSNGGVKCA
TSKKMRTVRKPQSLKMKTESIDVLIEQVMTIAGKHAKQVTLIDKQKTNRVWIRRVNGVRL
LQVETKHHKGIISQKDASLNNLTKRVARHFARKTAYIHPSDSITHGHSGVVFLRANISGS
KSYSIDDLFVVRGKRNGKLMESRNKVAWRKMFQIDHFSIVGIKIWNAFDAEYVKLRDESV
SDHDCVGGITPEECGILAAQILRVFYPCWRITCTKCISNWLSKPTSEQIEHIYERGNLAI
QDLNKRIPSAHHVTQMVELLRQRIKNTTFDMGNNTKVHELIGHRQDGVFRHLNRLNNSIL
AANGSSTIEWESMNESLLELARWHNKRTESIASGGISSFRNKISAKAQINFALMCDNQLD
TNGNFVWGERGYHAKRFFSEFFTKIDPKDGYSHHTVRATPTGVRHLAIGNLIIPGDLQKL
REKLEGVSITAVGISEKCVSRRNGDFVYPCSCVTSENGKPVLSDVILPTRNHLVIGNTGD
PKLVDLPKTETGRMWIAKEGYCYINIFFAMLVNVSEKDAKDFTKFVRDEIMPQLGKWPTM
MDVATACYKLAIIYPDVRDAQLPRILVDHSEQIFHVIDSYGSMTTGYHILKAGTVSQLIS
FAHGALLGEMKMYRVGGTQKMEINMCCCQRKNLLIKQLIRAIYRPKLLTEIIETEPFVLM
LAIVSPSILKAMFRSGTFNQAIKFYMHRSKPTAQTLAFLEALSERVSRSRVLSEQFNIID
GALKELKSLANMSMRTQHTYPIVQNQLDIMIERVSADAELLRDGFVVSKGRVQALIEKNY
QDDLRNSFTDLPYVQQLQQTMSFSRVKHGFGELCESKDLSFSKEAWMGHLSSFSAGGKQI
IRLARTKSQQMLASGGRRVTLAARNITMRMVTATFSEIMKFVNMLLVLSMIFKLWKQANT
LLEEREKDKWEKFDRSQNELRRQLRYTLWRFEAQEGRQVTREEFFDYLKYNEGIENRHEL
INELIANQPLFSIQAKKHGEIRFEQTVALMALLAMMFGSDRSDAVFSTLSKVRTIFTTMA
QEVRCQSIDDIHDVFDEKKATIDFELATDQPAQVQMDKTFCEWWQNQMEQNRTVPHYRTG
GKFIEFTRSNAASVANEIAHTPDFSEYLIRGAVGSGKSTGLPCYLSAKGRVLLLEPTRPL
TENVCAQLRGSPFHKSPSMSMRNGHTFGSTPIHVMTTGYALHFFCNNVERIREYDFVIFD
ECHVIDSSAMSFYCALKEYSYQGKILKVSATPPGREVEFKTQFPVTIATEDSLSFDQFVQ
AQGSGANCDILKKGHNILVYVSSYNEVDRLSKLLVDRGFKVTKVDGRTMKLGGVEINTSG
TAEKPHFIVATNIIENGVTLDIDVVVDFGVKVVAELDADARTMRYNKQAISYGERIQRLG
RVGRLKDGHALRIGHTEKGITEIPVAIAVESAFQCFAYGLPVMTSNVSTSIIGNCTVKQA
RTMMNFELSPFFTVELVKYNGTMHPEIHKILVPYKLRDSSMQLCKEAIPNSGVSRWHTAH
EYISHGIVLETLKSDVRIPFYLKGVPEKVYEKIWNAVCVFKSDSGFGRMSTASACNVAYT
LKTDPLSITRTIAHIDALLIEEQEKKSQFDLMSSHVTNSSSISLAGLVNRLRSKWMVDHS
GENIVKLQNARSQLLEFRGMDINLDDVESFRKFGCAETVRCQSKSEVSKTLQLKGKWNKP
LITSDFFVVCMVSIGCVVLMYQIFMAKWNEPVKLEGKSKAKTLRFRQARDNNAKYEVFAD
EDTKRHYFGEAYTKKGKKSGKARGMGVKTKKFVNVYGFDPCEYSLVRFVDPLTGLTYDRH
PMEHMMDVQETIGDDRREAMWNDELDKQLFVTRPTIEAYYIKDKTTPALKIDLNPHNPMR
VCDKAETIAGFPEREFELRQSGSATLVPYSEVPVQNEKQEFDEEHVRTEAASLHFGLRDY
NPIAQAVCRITNTGVDYDRSIFGIGFGQFLITNAHCFKLNEGETRIVSRHGQFTIEKTHS
LPIHQVKDKDMVIVRLPKDFPPFPQRLQFRAPQEREKICLVGSNFQEKSIQSVITESCMT
FKHNGGKYWKHWITTKEGHCGLPAVALKDGHIVGIHNLGGENTNINYFTPFDADILDKYL
LNAEALQWTKGWKYNKNKVCWGGLELLDDNEPEESGLFRMVKLLKSLEEDGVRTQSRDDA
WLEKEIKGSLKVVARCPGQLVTKHVVKGPCAMFQLYLELHEDAKSFFTPRMGSYGKSRLS
KGAFIKDIMKYSSNTVVGNVDCDVFENAIDNVEKILWKAGMMQCEYVTDAEAIFQSLNMN
AAVGAMYQGKKKDYFEDFTAADRELIVKQSCERLFLGKKGVWNGSLKAELRPIEKVHENK
TRTFTAAPLDTLLGGKVCVDDFNNFFYSCHLRGPWTVGITKFYAGWNEFLSKLPDGWLYC
DADGSRFDSSLTPYLINAVLELRLRFMEEWDAGEQMLKNLYTEIIYTPIATPDGSVIKKT
KGNNSGQPSTVVDNTLMVILAMQYSLQLLGVDFETQDEVVRYFANGDDLLIAVRPDCEFV
LKGLEIHFSNLGLNYNFSARHHDKKDVWFMSTRGILRDGILIPKLEEERIVAILEWDRSR
EFSHRLDAICAAMIEAWGYDELLQHIRKFYYWLLEQEPYRSIAQEGKAPYIAETALRHLY
TNAMATQSELEKYTEAINQHYNDEGGDGSIKVRLQAGDETKDDERRRKEEEDRKKREESI
DASQFGSNRDNKKNKNKESDTPNKLIVKSDRDVDAGSSGTITVPRLEKISAKIRMPKHKG
GVAISLQHLVDYNPAQVDISNTRATQSQFDNWWRAVSQEYGVGDNEMQVLASGLMVWCIE
NGTSPNINGMWTMMDGEEQVEYPLKPVMDNARPTFRQIMAHFSDVAEAYIEKRNSTEVYI
PRYALQRNLRDPSLARYGFDFYEITAKTPVRAREAHFQMKAAAIRGKSNSLFGLDGNVGT
QEENTERHTAEDVNQNMHNLLGMRAM
NT seq
9621 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacattagtttgccaagcagttgcagcaccggtttggtcaaatggagccaggaca
aggcgtatcagggatgcagatggtgagtacaggtgtactcagtgtgacatgggtttcgat
tctatgaccatggcgcgtcctgtgaatcattgctgtgatgggatcatgattgacgagtat
aatttgtatgacgacgatcctattatgcatttggttgattccaaaacaccaatcaagcgg
ggttcgcaagagactgaaggtgatggaatggcagctgaagccattaaggtaactggagct
gaaccagttaattgcttcatggttggaactattaaatgcaaaatcaatgagaattcaatt
gtggcaaaaggcgttatggctgccatcccaagacagcttactcaggatgaggttttcatg
cggaaagctagattgcaggcagctgttgcgaaatcgacaattgaaagagaagagaaggaa
aggcaatttgcatttagcaagctagaagagaaactccgggctaggcgtgaaaaactgaaa
gatggtatagttatcaaaactaggaaaggattggagtggagagaagcaacaccgaatcag
cagagaggaaaattgcaatcaacctctttcgatgcctctggagggaaaacattgacaccc
cacactatctactgtaaaaccaaatcatcgaaattctcaaacggaggtgtgaaatgcgca
acatcgaagaaaatgaggactgtcagaaaaccacagagtttaaaaatgaaaactgaatcc
atagatgtgctaatcgagcaggtcatgaccattgcaggaaagcatgcaaaacaagtaact
ttgattgacaaacagaaaaccaacagagtctggataaggcgagtaaatggagtccgttta
ttgcaagttgaaacgaagcatcataaagggattatcagccaaaaagacgcttctctgaac
aatcttacaaaaagagttgctagacattttgcaaggaaaacagcatatatacacccatca
gacagtatcacacatggacacagcggagtcgtcttcttgcgcgcgaacatcagtggcagc
aagtcatacagtattgatgacttattcgttgttaggggcaaaagaaatgggaaattaatg
gaaagccgtaacaaagttgcgtggcgcaagatgtttcaaattgaccacttttctattgtt
ggaatcaagatttggaacgctttcgatgcagaatatgttaaattgagagatgagtctgtt
agtgaccatgactgtgttggaggaatcacaccagaagaatgtggcattcttgctgcacaa
atattacgtgttttctacccttgttggcgcataacttgtacgaagtgcatttcgaactgg
ttgagtaaaccaacaagtgagcagatcgaacacatttatgagcgagggaacttagccata
caagatttgaataaaagaattccatcagcacatcatgtaactcagatggttgaactccta
cgtcagaggatcaaaaacacaacatttgacatgggaaacaacaccaaagttcacgaattg
atcggccaccgacaagatggagttttcaggcatttgaaccgactcaacaatagtatttta
gcggcaaatggttcaagcacaattgagtgggaaagcatgaatgagagtctattagagtta
gcgcgctggcataacaagcgaactgaatctatagcaagtggaggtatttctagctttcgg
aacaaaatatctgccaaagcccaaatcaattttgcactaatgtgtgataatcaactggac
acaaacggaaattttgtttggggcgaacgtggctaccatgcaaagcgtttcttttctgag
tttttcacgaagattgatccgaaggatggatactctcatcacactgttagggccacacca
acaggagtcaggcacctagcaattggaaatctgatcattccaggggatctacagaaatta
agagagaaacttgaaggggtgtcaatcacagcagtgggcatctcggagaagtgtgttagc
agacggaatggtgactttgtgtatccttgctcatgcgtgacatctgagaacggaaaacca
gttttgtcagatgttattttacctacaaggaatcatttggttattgggaatacaggggat
ccaaagttagttgacttacccaaaactgaaactggtaggatgtggattgcaaaagaggga
tattgttacataaacatattcttcgcaatgcttgtgaacgtcagcgaaaaggacgccaag
gatttcacaaagtttgttagggatgaaatcatgccacagcttgggaaatggccaacaatg
atggatgtagcaactgcttgctataaattagcaataatctaccctgatgttagagatgcc
cagctgccgagaattttggttgatcactcagaacaaatcttccatgtgatcgactcgtat
ggttccatgactacaggttatcatatcttaaaagcaggaacagtttctcagttaataagt
tttgcgcatggtgcattgttgggtgagatgaaaatgtatagagttggaggcactcagaaa
atggaaattaatatgtgttgctgtcagaggaaaaacctactcatcaaacagttgatacga
gccatttacaggccaaaactattgacggaaattattgagacagagccatttgtgctcatg
cttgctatcgtgtctccgtctattctaaaggcaatgtttcggagtggaactttcaaccag
gcaatcaagttctacatgcacagatcgaagccaacagcacaaacacttgcatttcttgaa
gcattatctgagagagtgagtagatcaagggttctgagtgaacaattcaacatcattgat
ggcgctttgaaagagttgaaatcattagccaacatgagtatgagaacacaacacacgtat
cctatcgtgcaaaatcagttggacatcatgattgagagggttagcgctgatgcagagcta
ttgcgggatggttttgttgtcagtaaaggaagagtccaggctctaattgaaaaaaactat
caagacgacctgagaaattccttcacagacttgccatatgtacaacaattgcaacaaact
atgtcattttcaagagtgaagcatggttttggagaattgtgcgaaagcaaagacttgagc
ttttccaaggaagcatggatggggcatttgagctcattttcggcaggaggcaaacagatc
atccgcttggcgcgcacaaagtcgcagcagatgttagcaagtggtggtagacgggtcaca
ttagccgcaaggaacatcacaatgcgcatggtcacagcaacgttttcagaaatcatgaaa
tttgtgaacatgttgttggttcttagtatgattttcaagttgtggaagcaagccaatacc
ttgctcgaggagagagaaaaagacaagtgggagaagtttgacaggagtcagaatgaactt
aggaggcaattaaggtacactttgtggcgctttgaagcacaggaaggtaggcaagtcaca
cgagaagagttttttgattatctcaaatataatgagggcattgaaaatcggcatgagttg
attaatgaactaattgctaaccaaccattgtttagcattcaagctaagaaacatggagaa
atccggttcgaacaaacggttgcattgatggcattgttggcaatgatgtttggctctgat
aggagtgatgctgtattttcaacattatcaaaagttagaacaatttttacaacaatggcg
caagaagttagatgtcagagtattgatgatattcatgatgttttcgatgagaaaaaggct
acaattgattttgagcttgcaacagatcaacccgcgcaagtacagatggataaaactttt
tgtgaatggtggcaaaatcagatggagcaaaatagaacagtaccacattatagaactgga
gggaagttcattgaattcacacgcagcaatgcagcaagtgtggcaaatgaaatagcacac
acaccagacttctcagaatacttaattaggggtgcagttggttcaggtaaatcaacgggt
ttaccatgctacctaagtgcaaagggtagagttcttttattggagccaactagaccattg
acggaaaatgtttgtgcacagttgcgtgggtcaccatttcacaaaagcccaagcatgtct
atgagaaatgggcatacttttgggtcgacaccaatacatgttatgacaactggttatgcg
cttcatttcttttgcaataatgttgagagaatacgagagtatgatttcgtcatattcgat
gagtgccatgttattgattcaagtgccatgtcattttactgtgcattgaaagagtattcg
taccaaggaaagattcttaaggtttcagcaacaccaccaggaagggaagtggaattcaag
acacaatttccggtgaccatcgcgactgaggattcactttcatttgaccaatttgttcaa
gcacagggtagtggagccaattgtgacattcttaagaaggggcacaatattctcgtgtac
gtgtcaagttacaatgaagtagacaggctttcaaaactacttgttgatagaggctttaag
gttacaaaggttgatggacgcacgatgaaacttggtggtgtcgagataaatacaagtggc
acagcagagaaaccacacttcatcgttgcaacaaacatcatagagaatggtgtaacgctt
gacattgatgtagttgtggattttggcgttaaagttgttgcagaattagacgcagacgct
cggaccatgagatacaacaaacaggcaatcagttacggtgagcggattcaaagattagga
cgagttggaagacttaaagatgggcatgcactaagaattggacacacagaaaaagggata
accgaaatacctgtagccatagcagttgaatcagcttttcagtgctttgcatatggtcta
ccagtgatgactagtaatgtttcaactagcattattggcaactgtactgtgaagcaagca
cgaacaatgatgaattttgaactttctcctttcttcacagttgagcttgtgaagtataac
ggaacaatgcatccagagatacacaagattttggtaccatataagttgcgtgattcatct
atgcagctgtgtaaggaagcaataccaaatagtggagtttcaaggtggcacacagcacat
gagtacatcagtcatggaatagttttggagacactcaaatcagacgtcagaattcctttt
tatctgaaaggagtgccggagaaggtgtatgaaaagatatggaatgcagtttgtgtgttc
aaatctgatagcggattcggaagaatgtcaactgcaagtgcgtgcaatgttgcatacaca
ctcaaaacagatccactgtcaatcacacgaacaattgcgcacatagatgcgctcttaatt
gaagaacaagagaagaaaagtcagtttgatctcatgagttcacacgttactaactcatca
agcatatcgctcgcaggtttagtcaacagattgcgtagtaagtggatggtcgatcacagt
ggtgagaacattgtcaaactgcaaaacgcacgctcccaactgcttgagtttagaggcatg
gatataaatttggatgatgttgaaagttttagaaagtttggttgtgctgagacagtgcgt
tgtcagagtaaatcagaagtttctaaaacactgcagcttaagggtaaatggaacaaaccg
ctcattacaagtgatttcttcgttgtttgtatggtgagcattggatgtgtagttttgatg
taccaaatttttatggctaagtggaacgaacccgttaaacttgaagggaagtcgaaagct
aaaactttgcgttttagacaggctcgcgacaacaatgccaagtatgaagtgtttgcagat
gaagacacaaaacgccattattttggtgaggcatacacaaagaagggcaagaaaagtggt
aaggcacgagggatgggtgtgaaaacaaagaagttcgtgaatgtgtatggttttgatcca
tgtgaatattcccttgttcgattcgttgatccactcactgggttgacttatgatagacac
cctatggaacacatgatggacgtgcaggagactataggtgatgatcgcagggaggccatg
tggaacgatgaactcgataaacaattgtttgtgaccagacccacaattgaagcgtactat
ataaaagacaaaaccacgccagcactcaagatcgatttgaaccctcacaatccaatgagg
gtctgcgataaagctgaaactattgctggattcccagaacgtgaattcgaattgagacaa
tctggctctgcaacattagttccatacagtgaagtaccagtgcaaaacgagaaacaagaa
tttgacgaggagcatgtgcgaacggaggcagcgtcgctacattttggcttgcgcgactac
aatccaattgcgcaagccgtgtgtagaataacaaacacaggggtcgattatgaccgatca
atctttggcatcggatttggtcagtttttaatcacaaatgcgcattgctttaagttaaat
gaaggggaaacaagaattgtgtcaaggcatgggcagtttaccattgagaagacacatagc
ttaccaatccatcaagtgaaggataaagacatggtcatagtccggttgccaaaggatttt
ccaccattcccgcaaagattacaatttcgagctccccaggaaagagagaagatctgtctt
gttggtagtaatttccaggaaaagagcattcaaagtgttatcaccgaatcatgcatgacc
ttcaaacacaatggtgggaaatactggaaacactggataacgacgaaagagggtcactgt
ggacttcctgctgttgcactcaaggatgggcatatagtaggaattcacaacctgggtggt
gagaacacgaacataaactatttcacaccttttgatgcagatatactagataaatattta
ttgaatgcggaggcgttgcagtggacaaaaggatggaagtacaataaaaacaaagtttgt
tggggaggtttggagctactagatgataacgaacctgaggaaagtggtttgttcaggatg
gtaaagttactaaagagtctcgaagaagatggcgttagaactcaaagcagggatgacgca
tggctagagaaagagattaaaggaagtttgaaagtggttgcccgctgcccaggacaattg
gttactaagcacgtggtaaagggtccatgcgccatgtttcagttgtacttggagctacat
gaagacgcaaaatctttcttcacacctcggatgggcagttacgggaagagtaggcttagc
aaaggcgcattcattaaggatataatgaaatactcaagcaatactgttgttggtaatgtt
gattgcgatgtctttgagaacgcaattgacaatgtggagaaaatcttatggaaggcaggg
atgatgcagtgtgagtatgtgacagatgcagaggctatttttcagagtttaaatatgaat
gcagctgtcggtgccatgtatcagggcaagaagaaagactattttgaggatttcacagcc
gccgatagagagctcatagtgaagcaaagttgtgagaggttattccttggcaagaaaggg
gtgtggaatggttctttgaaagcagagctgagacctatagaaaaagtgcatgagaataaa
acaagaactttcacagcagctccgcttgacacactacttggtggtaaggtctgcgtggat
gacttcaataatttcttttattcatgtcatcttagggggccatggaccgtaggaatcacg
aagttttacgctgggtggaacgaattcctaagcaagctacctgacggttggctgtattgt
gacgcggatggctcgagatttgatagctctctgacaccgtaccttatcaatgctgtgcta
gagttaagattaaggtttatggaagagtgggatgctggcgagcaaatgttgaagaatctt
tacacagaaatcatttacactccaatagcaacaccagatggctcagtcataaagaagacg
aaaggaaataatagtggacaaccatcaacagttgttgataacacattgatggtgattctt
gctatgcagtatagcctacagctacttggagtagattttgaaacacaggatgaagtcgtt
cgctattttgcaaatggtgatgatctattgatagctgtgcggccagactgtgagtttgtg
ctcaaaggcttggagatacatttctctaatctggggttaaattataacttttctgcgcgg
caccatgacaagaaagatgtttggtttatgtcaacaagaggcattttgagagatggaatt
ctgataccaaaacttgaagaagaacgaattgttgcaattttggaatgggatagaagtaga
gaattttcacataggcttgatgccatatgtgcagcaatgattgaagcttggggttacgac
gagcttttgcagcatattcggaaattctattattggttgttagaacaggaaccatacagg
agcatagctcaggaaggaaaagcaccatacatcgcggagacagcgcttcggcacctgtac
acaaatgccatggcaacacaaagtgaacttgagaaatacacggaagcaatcaatcagcat
tacaatgatgaaggtggcgatggatcaatcaaggttcgattgcaagctggtgacgaaacc
aaggatgatgaaagaagaaggaaagaggaggaggacagaaagaaaagagaggagagtatc
gatgcgagccagtttggttcgaatcgtgacaataagaaaaacaaaaataaagagagtgac
acaccaaacaaattaatagtgaagtctgatcgagatgttgatgcaggatcttcaggcaca
atcacagtaccaaggcttgaaaagatctcagcaaagattaggatgccaaaacacaaaggc
ggagtggctatcagcttgcaacatttagttgattacaatccagcacaagttgacatttca
aacactcgagcaacgcagagccagttcgataactggtggagggcagtgtcgcaagagtac
ggggttggagacaatgaaatgcaagttttggcaagtggtttgatggtatggtgcattgaa
aatggaacatcgcctaacataaatgggatgtggacaatgatggacggggaagagcaggtt
gagtaccccctaaagccagtgatggataatgcgcgtccaactttcagacagataatggcg
catttcagtgacgtagcggaggcgtacattgaaaagagaaactcaacagaggtgtacata
cccaggtacgctctacaacgcaatttaagggacccgagtcttgcaagatatggtttcgac
ttctacgaaatcacagcaaagacacctgtgagggcaagagaggcacactttcagatgaaa
gcagcagcaatcagaggaaaatccaatagcctatttggcttggatgggaacgttgggaca
caggaggagaacacggagaggcacacagcagaagatgtcaatcagaatatgcacaatctt
ctcggaatgagagccatgtaa
DBGET
integrated database retrieval system
