Viruses: 1494047 Help Entry 1494047           CDS       T40000                                  Symbol PepMoVgp1 Name (RefSeq) Pepper mottle virus; polyprotein Virus 12209  Pepper mottle virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Peptidase_C6 Poty_coat RdRP_1 Poty_PP Potyvirid-P3 Peptidase_S30 Peptidase_C4 DEAD Helicase_C Flavi_DEAD ResIII Cas3-like_C_2 Motif Other DBs NCBI-GeneID:  1494047 NCBI-ProteinID:  NP_041276 RS:  NC_001517 UniProt:  Q01500 LinkDB All DBs Position NC_001517:168..9374 Genome browser AA seq 3068 aa AA seqDB search MATSVIQFGSFVCNLPKSQPLCTTVHCPKQSMSTNIVRPSDPFAELEKHLEPYLQKRMDA TIRQTKGGTLVYKHMSEAKRARKLRKKQREEEEVRLFMNAAPYIVSNITIGGGEVPSKME EVSIKRPLNKTPSRKIKKSLTPVTFRDGHMNKFLRELRDCATRNSMTVHLIGKRKTELAF KRRASLNAVYATLHHMRGVDRKRDIVLEEWMNDYVLNLSKVSTWGSLFHAESLKRGDSGL ILNARALRGKFGRCSRGFFIVRGKSDGVVLDARSKLSMATVTHMEQYSTPEAFWSGLEKK WSVVRKPTAHTCKPTYSVSNCGEVAAIIAQALFPCHKLTCGECSKEICDLTSNECVQELY KNTSLALERMNNLHPEFQHIVKVLSVVRQLTEASNHGTETFDEIFKMIGSKTQSPFTHLN KLNEFMLKGNENTSGEWLTARQHLRELVRFQKNRTDNIKKGDLASFRNKLSARAQYNLYL SCDNQLDKNASFLWGQREYHARRFFLNFFQQIDPSKGYLAYEDRTIPNGSRKLAIGNLIV PLDLAEFRKRMNGIDTQQPPIGKYCTSQLDGNFVYPCCCTTLDDGQPIRSAVYAPTKKHL VVGNTGDTKYINLPKGDTEMLYIALDGYCYINIYLAMLVNISEEEAKDFTKKVRDIFMPK LGKWPTLMDLATTCAQLRIFHPDVHDAELPRILVDHNTQTCHVVDSYGSISTGYHILKAA TVSQLVLFADDNLESEIKHYRVGGIVENHKVQIDNQPSRCGVSEFHAIRMLIKGIYRPSV MYELLSEEPYLLVFSILSPSILIAMYNDRAFELAVQIWLEKEQSIPLIATILTNLAAKVS VATTLVQQLQLIELSADQLLNVTCDGFRVSFAYQSALTLLTRMRDQAKANSELISGGFNE YDQDLAWTLEKNYQGLLHDQWKELSSLEKFRYYWSSRKRKTRLRSNIKSRSSPVASAISS LSLKPFMGKVFSHMKAGAVCTKQGTKNFIDARCLGISTYFVGSLMRKFPSAKVLLSSLFV LGALLNITHAANRIIIDNRISREHAAALELYRKEDTCHELYTALERKLGEKPTWDEYCSY VAKINPAMLEFIKDSYDEKQVVHQRSTEDLKKVEHIIAFVTLAIMLFDSERSDCVFKTLN KFKGVVCSLGSGVRHQSLDDFVSTMDEKNFVVDFELNDSVQRKNLTTEITFESWWDEQVA RGFTIPHYRTEGRFMEFTRATAAKVASDISISSERDFLIRGAVGSGKSTGLPHHLSTYGR VLLIEPTRPLAENVFKQLSGGPFFLKPTMRMRGNSVFGSSPISVMTSGFALHFFANNITQ LQEIQFIIIDECHVMDASSMAFRSLIHTYHTNCKVLKVSATPPGREVEFTTQFPVKLVVE DSLSFKTFVESQGTGSNCDMIQYGNNLLVYVASYNEVDQLSKLLVAREFNVTKVDGRTMK HGELEIVTRGTKSKPHFVVATNIIENGVTLDIDVVIDFGMKVSPFLDVDNRSVAYNKVSI SYGERIQRLGRVGRIQKGTALRIGHTEKGLIEIPQMISTEAALYCFAYNLPVMSSGVSTS MIKNCTIPQVRTMHTFELSPFFMYNFVSHDGTMHPVVHETLKRYKLRDSVIPLSESSIPY RASSDWITAGDYRRIGVKLDIPDETRIAFHIKTFHRKFTNNLWESVLKYKASAAFPTLRS SSITKIAYTLSTDLYAIPRTLAVVESLLEDERTKQYQFKSLIDNGCSSMFSVVGISNALR AKYSKDHTVENINKLETVKAQLKEFHNLNGSGDELNLIKRFESLQFVHHQSKSSLAKALG LRGVWNKSLIVRDAIIAAGVACGGAWLLYTWFTAKMSEVSHQGRSKTKRIQALKFRKARD KRAGFEIDNNEDTIEEYFGSAYTKKGKGKGTTVGMGRTNRRFINMYGFEPGQFSYIKFVD PLTGAQMEENVYADIVDVQEKFGDIRRQMILDDELDRRQTDVHNTIHAYLIKDWSNKALK VDLTPHNPLRVSDKASAIMKFPEREGELRQTGQAVEVDVCDIPKEVVKHEAKTLMRGLRD YNPIAQTVCKLTVKSELGETSTYGLGFGGLIIANHHLFKSFNGSLEVKSHHGVFRVPNLM AISVLPLKGRDMIIIKMPKDFPVFPQRLKFREPASTDRVCLIGSNFQERYISTTVSEISA THPVPRSTFWKHWISTDDGHCGLPIVSTTDGFILGLHSLANNRNSENYYTAFDSDFEMKI LRSGENTEWVKNWKYNPDTVLWGPLQLTKGTPSGMFKTTKMIEDLLAFKSESVREQAHTS SWMLEVLKENLKAIAYMKSQLVTKHVVKGECMMFKQYLQENPRANEFFQPKMWAYGKSML NKEAYIKDIMKYSKVIDVGVVDCDRHLRKLSLELLYTQIHGFRKCSYITDEEEIFKALNI TTAVGAMYGGKKKEYFEKFTTEDKAEILRQSCLRLYTGKLGVWEWALKAELRSKEKIEAN KTRTFTAAPIDTLLGGKVCVDDLNNQFYSKNIECCWTVGMTKFYGGWDKLLTALPAGWIY CDADGSQFDSSLTPYLINAVLTIRYAFMEDWDIGYKMLQNLYTEIIYTPISTPDGTIVKK FRGNNSGQPSTVVDNSLMVVLAMHYAFVREGIAFEEIDSICKFFVNGDDLLIAVNPERES LLDTLSNHFSDLGLNYDFSSRTRNKSELWFMSHCGISVEGTYIPKLEEERIVSILQWDRA ELPEYRLEAICAAMIESWGYPQLTHEIRRFYSWLIEKNPYADLASEGKAPYISELALKKL YLNQDVQMMSFRSYLKYFADADEEFECGTYEVRHQSSSRSDTLDAGEEKKKNKEVATVSD GMGKKEVESTRDSDVNAGTVGTFTIPRIKSITEKMRMPKQKRKGVLNLAHLLEYKPSQVD ISNTRSTQAQFDNWYCEVMKAYDLQEEAMGTVMNGLMVWCIENGTSPNISGTWTMMDGDE QVEFPLKPVIENAKPTFRQIMAHFSDVAEAYIEMRNKQEPYMPRYGLVRNLRDMGLARYA FDFYEVTSRTSTRAREAHIQMKAAALKSAQTRLFGLDGGIGTQGENTERHTTEDVSPDMH TLLGVREM NT seq 9207 nt NT seq  +upstreamnt  +downstreamnt atggcaaccagtgttattcagtttggttcatttgtgtgcaatcttccaaagtcccagcca ctatgcacaactgtgcactgcccaaaacagagcatgagcactaatatagtgcgcccaagt gatccgtttgctgagctcgagaagcatcttgaaccatacttgcagaagaggatggatgcg acaatacgccaaactaaaggcgggacgcttgtgtacaaacacatgagcgaagctaagcgc gccagaaagcttagaaagaagcaacgtgaggaagaagaggtgcgtttgttcatgaacgca gccccatacattgtgagtaacatcacaatagggggaggggaggtgccctctaaaatggag gaagtgtccatcaagcgaccgctgaataaaactccttctcggaagattaagaaatcgctc acaccagtgacctttagggacggacacatgaacaagtttttgagagaacttagggattgt gctacccgtaacagtatgacagtacacttgattggaaagcggaaaactgagcttgctttt aaaaggcgtgctagtttaaatgccgtatacgctacactgcaccatatgcgtggagttgat cgcaagcgtgatattgtgctcgaagaatggatgaacgattatgttctaaatctatcaaaa gttagcacatggggttcactatttcacgccgagtctttaaagcgaggtgatagtgggttg atactgaatgctagagcactgagaggtaaattcggacgatgtagcagaggatttttcata gttcgcggaaaatcggatggagttgtactagatgcaagatccaagctttctatggcaact gtaactcatatggaacagtattcaacacctgaagcattttggagtggcttagaaaagaag tggagcgtggtgcgcaagccaaccgcacatacttgtaaaccgacgtattcggtttcaaac tgcggggaagtggccgctattatagcgcaagctttatttccgtgccacaagttgacgtgt ggtgaatgctcgaaagagatctgcgatctcacttccaatgagtgtgtgcaagagttatac aagaatacttccttggcactggaaaggatgaacaatctacaccctgaatttcaacacatt gttaaggtgttgagtgttgttaggcagctcactgaagcatccaatcatgggacggaaaca ttcgatgaaatcttcaaaatgattggatccaaaacacaaagtcctttcactcatttaaat aaactcaatgaatttatgttgaaagggaatgaaaatacaagtggggagtggttgactgcg cgacaacatttaagggagttggtgagatttcaaaagaacagaactgataatataaagaag ggtgacttagcatcattcagaaataagctttctgctcgtgcacagtacaatttgtattta tcatgcgataaccagcttgacaagaatgctagttttctgtggggtcagcgagaataccac gcacgtcggtttttcctgaacttcttccaacaaatagacccatcaaaaggttatttggca tatgaagatcggacgataccaaatggttctcggaagttagctataggcaacttaattgtt ccactcgatttagctgaattccgaaaacgcatgaatggcatcgacactcagcaaccacca attggtaagtactgtacaagccaattggatgggaattttgtgtatccgtgctgctgtaca acgcttgatgatggtcaaccaattcgatcggctgtttacgcaccaaccaagaaacattta gttgttggtaacacaggagacacaaagtacatcaacttgcctaaaggagacacagaaatg ctatacattgcacttgatggctattgttacattaacatttatctggcaatgttagtcaac ataagcgaggaagaggctaaggatttcacaaagaaagttcgggacatcttcatgccaaag cttgggaagtggccaacgttgatggatttggctacaacatgtgctcaacttcgaatattc caccctgatgtgcatgatgcagagctgcctcgtattttggtggatcacaacacacaaacg tgtcatgtggtcgattcatatggatcaattagtactgggtatcacattctgaaagctgca actgtttcacaattagtgttgtttgctgacgacaacttggaatctgagataaagcactat agagttggtggaattgtagagaatcataaagtgcaaatagataaccaacctagtagatgt ggagtgagtgagttccatgccatacgtatgttaattaaagggatctacaggccaagtgtc atgtatgaattactctctgaagaaccatacttgctagtgttctccattctttcaccctca atattgatagcgatgtacaatgatagggcttttgaattagctgttcaaatatggttagag aaggaacaatcaattccactgattgccactattttaacaaacttggcagcgaaggtttct gtggccacaactctcgttcaacaattgcagttgatcgaattatctgcagatcagctgctg aatgtgacttgtgatgggtttcgggtgagttttgcttatcaatcagctctaactctactc acaaggatgcgagatcaagccaaagcaaatagtgagttaataagcggagggttcaatgaa tatgaccaggatttggcgtggaccttggaaaaaaattatcaaggcctcttacacgaccaa tggaaagaattaagctcgctggaaaaatttcgctattattggtcctcaagaaagcgaaag actcgtttgcggtcaaatatcaaaagcagaagttcgcccgttgccagcgcaatatccagt ttatcactgaaaccatttatgggaaaggttttctcccacatgaaagcaggagcagtgtgc accaagcaaggaactaagaattttattgacgcaaggtgtttgggcatttcaacctatttt gtaggatcactcatgcgcaaatttcctagtgcgaaagtattgcttagtagtttattcgta ttgggagcgcttctaaatataacacatgctgcgaataggataataattgataatcgcatt tcacgcgaacatgcagcagcattggagctgtataggaaagaagatacttgccatgagtta tacaccgcactggagcggaagttgggagagaaaccaacctgggacgagtactgctcatat gtggctaagatcaatcctgcaatgctggaattcattaaagactcatatgatgaaaaacag gtcgtccaccaaagatcaacagaggatctcaagaaagttgaacacataatagcatttgtt acactggcaataatgctttttgactctgaaaggagtgattgtgtattcaaaactctgaat aaatttaagggtgttgtgtgttcactaggctcaggagttagacatcagtctttggatgat tttgtaagcacaatggatgagaagaatttcgttgtggatttcgaattgaatgatagtgtc caaaggaagaacctaacaactgagatcacctttgaaagctggtgggatgagcaagtcgct cggggtttcacaataccacattatagaacagaggggaggtttatggagttcacaagagca acagcagctaaagtcgctagtgatatatcaatctcatctgagcgcgactttttgattcga ggagctgtgggttctggtaaatccactggattaccacaccacttgagcacttacggtaga gttttgctgatagaaccgacacggccattagcagaaaatgttttcaagcagttatctggt ggtccatttttcctaaaacccacaatgagaatgcgtggtaatagtgtgtttgggtcgtcg cctatttctgtaatgacaagtgggttcgctttgcatttctttgctaataacatcactcaa cttcaagagattcaattcataattatagatgagtgccatgttatggatgcatcttcaatg gcatttaggagcttaattcatacataccacactaactgcaaggttttgaaggtttcagca acaccaccaggaagagaggtagagttcacaacacaattcccagtgaaattagtggttgaa gatagcctatcttttaagacatttgtcgagagtcaaggcacaggtagcaattgtgacatg atccaatacggaaataatttattagtgtatgtagctagttataatgaagtagatcaactg tcaaaattactagtagctcgtgaattcaatgtcacgaaagtagatggtaggacaatgaag catggtgaactcgagattgtgacacgaggcacaaagagtaagccacattttgttgtcgcc actaatattattgagaatggagtaactttagatatagatgttgttattgattttggaatg aaagttagcccatttttagatgtagataataggtctgtagcatacaataaggtctccatt agttacggagaacgaattcagcggcttggaagggtaggtcgcatacagaagggcaccgca cttcggataggtcacactgagaaagggctaatagaaatacctcaaatgatatcaactgaa gctgctctgtattgctttgcgtacaatttaccagtcatgtctagtggcgtctccacaagc atgattaaaaattgtacaataccacaagttcgcacaatgcatacatttgagttgagtcca tttttcatgtacaactttgtgtcacatgacggaacaatgcatccggttgtccatgaaact ctcaagcgctataaattgcgtgattcggttattccattaagtgagagttcaattccatac agagcttctagtgactggatcacagctggtgactacaggcgtattggagtgaaactggat attccagatgaaacgcgaattgcatttcatatcaagacattccaccgcaaattcaccaac aatttgtgggaatcggttctcaagtataaggcatctgcagcattcccaacattgcgatca tcatcaattacaaagattgcgtacacactgagcactgatttgtatgcaattccacgtact ttagcagttgtggaaagcctgttggaagatgagagaacaaaacaatatcaattcaaaagc ttaattgataatggttgctcaagtatgttctcagtggttggaatctcaaatgcactcaga gctaaatattcgaaagatcacactgtggagaatataaataagcttgaaactgtcaaagca caactcaaagagttccacaatctgaatggctctggtgatgagttaaatttgatcaagaga ttcgagtcactacagtttgtgcatcaccagtccaagtcttctcttgcgaaggctcttgga ttaagaggtgtttggaataaatcactcattgttcgcgatgcgatcattgcggccggtgtt gcatgtggtggtgcatggctattgtatacgtggttcaccgcgaaaatgtctgaagtgagt catcaaggacgctctaagacgaaaagaattcaggcattgaaattcaggaaggcacgtgat aagagagctggatttgagattgataacaatgaagatactattgaagagtacttcggttct gcttataccaagaaaggaaaaggtaaaggcacaactgttggcatgggcagaacaaacaga cgatttatcaacatgtatgggtttgagcccggacaattctcttacatcaaatttgttgat ccgctcacaggtgcacaaatggaggaaaatgtttacgctgatatagtcgatgtgcaagaa aagtttggtgatattcggaggcaaatgatacttgatgacgaattggatcgtcgacaaaca gatgtccataacactattcatgcttacctcattaaagattggtcaaataaggcattgaaa gtggacttgactccgcataatcctcttcgggtaagtgataaggcaagcgctataatgaaa ttccctgagcgggagggagaattgcgccaaactggacaagcagtggaggttgatgtttgc gacataccaaaagaagtagtgaagcacgaagcgaaaactttgatgaggggccttcgtgat tacaatccaatagcccaaactgtttgcaagttgactgtaaaatccgaactgggtgaaaca tcaacatatggtttaggtttcggtgggttaattattgcaaatcaccatttgttcaagagc tttaatggcagtctcgaagttaaatcacatcatggggtttttagagtgccaaacctgatg gccataagcgtcttaccgttgaaggggagagatatgatcataattaagatgccaaaggat ttcccagtcttcccacaacgactcaaattcagagagcctgcctcaacagatagagtgtgt ctcattggatcaaacttccaagaaagatacatttctacaacagtgtcggaaatcagtgcc acgcatccagtcccacgcagcacattttggaagcattggatctctacagatgatggtcat tgtggtttgcctattgttagcacaacagatggatttatcctagggctacatagtctagca aataataggaacagtgaaaattattacactgctttcgactccgattttgaaatgaaaata ttgaggagtggagaaaataccgagtgggtaaagaattggaaatataatccagacacagtt ctatggggacctctacaactcactaagggaacaccaagtggaatgtttaaaaccacaaag atgattgaagatttactggcattcaagagtgaaagtgtgagggaacaagcacacacatca tcttggatgcttgaagtcttgaaagagaatttgaaggccattgcatatatgaagagtcag ctcgtcaccaagcatgttgtgaagggtgagtgtatgatgttcaaacagtatttgcaggaa aaccccagggcaaatgaatttttccagcctaagatgtgggcgtatggaaagagtatgttg aataaggaagcctatatcaaggatataatgaaatattcaaaggttattgatgtaggagta gtcgattgcgaccggcatttgaggaagctatcgttagagttattgtatactcagatccac ggctttcgcaaatgttcttacatcacagatgaagaggagatattcaaggcattgaatata accacagctgttggagctatgtatggggggaagaaaaaggagtactttgaaaagttcaca acagaggataaggctgagattctccggcaaagctgtttgaggttgtacacgggtaaactg ggtgtgtgggaatgggctctaaaagctgaactgagaagtaaggaaaagatagaagccaat aagacacggactttcacagcagccccaattgatacactattaggtggtaaggtgtgtgta gatgatctcaacaaccagttttattcgaaaaatattgaatgttgttggacggttggaatg accaaattctatggtggatgggataagcttttgacagctctgcctgctggatggatatat tgcgatgcagatggttcgcaattcgatagttcattgacaccttatctcataaatgctgta ttgactatacggtatgcttttatggaagattgggacattgggtataagatgttgcaaaac ttgtacacagaaataatctacacaccaatatccacgcctgatggaacaattgtgaagaag ttcagaggcaataacagtgggcaaccttccaccgttgtagacaactcacttatggttgtg cttgctatgcattatgcatttgtacgggaaggtatagcatttgaagaaattgactccata tgtaagttcttcgttaatggagacgatttgctaatagctgtgaacccagaacgtgagagc ctattggacacactgtcgaatcatttttctgatttagggctcaattatgatttctcatct cggacgaggaataaatcagaattgtggttcatgtcacattgtgggatttctgttgaaggc acgtatataccgaagcttgaagaggagcgaattgtatcaattctccaatgggaccgagca gagctaccagaatacagattggaggctatttgtgcagcaatgattgaatcatggggctac ccacaattaactcatgaaattcgaagattctatagctggttaattgagaagaacccatac gctgacttggcatctgaaggaaaagctccatacatttctgaactagctctaaagaagctg tatctgaatcaagatgtacaaatgatgagcttcaggtcttacctcaagtatttcgctgat gcagatgaagagtttgaatgcggtacatatgaagttcgtcatcagagcagctcaagatca gacacattggatgctggagaggagaaaaagaaaaataaagaagtggccactgtgtccgat ggaatgggaaagaaggaggttgaatcaacacgcgattctgatgtgaatgcgggaactgtt ggaacattcaccattccaagaatcaaatcaatcactgaaaagatgcgtatgcctaaacag aagagaaagggtgttctcaacttggctcatttacttgaatacaaaccaagccaagttgac atatcgaacactcgttcaacccaggcacaatttgacaattggtattgtgaagttatgaag gcatacgatctacaagaggaggcaatgggtacagtgatgaatggcttaatggtttggtgc attgaaaatggcacgtccccaaacattagtggaacatggaccatgatggatggagacgaa caagtggaattcccattaaagcccgtgatagagaatgccaagccgacttttcggcaaata atggcgcacttttctgatgtggctgaggcatatatagaaatgcgcaataagcaagaacca tacatgccacgatatggtttggttcgaaatttacgagacatgggtctggctcgatacgca tttgacttctatgaagtcacatcacgtacgtcaacacgtgctcgcgaagcccatatccaa atgaaagcagcagcattgaaatctgctcaaacaaggttatttggattggatggtggcata ggaacacaaggagaaaacacagagcgccacaccactgaagatgtgagccccgacatgcat accttgcttggggtcagggaaatgtga

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