Viruses: 1494052 Help Entry 1494052           CDS       T40000                                  Symbol PVYgp1 Name (RefSeq) Potato virus Y; polyprotein Virus 12216  Potato virus Y Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Peptidase_C6 Potyvirid-P3 RdRP_1 Poty_PP Poty_coat Peptidase_S30 Peptidase_C4 Helicase_C DEAD Flavi_DEAD ResIII Cas3-like_C_2 Motif Other DBs NCBI-GeneID:  1494052 NCBI-ProteinID:  NP_056759 RS:  NC_001616 UniProt:  P18247 Q8JQ05 Structure PDBPDBj LinkDB All DBs Position NC_001616:185..9376 Genome browser AA seq 3063 aa AA seqDB search MATYMSTICFGSFECKLPYSPASCEHIVKEREVPASVDPFADLETQLSARLLKQKYATVR VLKNGTFTYRYKTDAQIMRIQKKLERKDREEYHFQMAAPSIVSKITIAGGDPPSKSEPQA PRGIIHTTPRMRKVKTRPIIKLTEGQMNHLIKQIKQIMSEKRGSVHLISKKTTHVQYKKI LGAYSAAVRTAHMMGLRRRVDFRCDMWTVGLLQRLARTDKWSNQVRTINIRRGDSGVILN TKSLKGHFGRSSGGLFIVRGSHEGKLYDARSRVTQSILNSMIQFSNADNFWKGLDGNWAR MRYPSDHTCVAGLPVEDCGRVAALMAHSILPCYKITCPTCAQQYASLPVSDLFKLLHKHA RDGLNRLGADKDRFIHVNKFLIALEHLTEPVDLNLELFNEIFKSIGEKQQAPFKNLNVLN NFFLKGKENTAHEWQVAQLSLLELARFQKNRTDNIKKGDISFFRNKLSAKANWNLYLSCD NQLDKNANFLWGQREYHAKRFFSNFFEEIDPAKGYSAYEIRKHPSGTRKLSIGNLVVPLD LAEFRQKMKGDYRKQPGVSKKCTSSKDGNYVYPCCCTTLDDGSAIESTFYPPTKKHLVIG NSGDQKFVDLPKGDSEMLYIAKQGYCYINVFLAMLINISEEDAKDFTKKVRDMCVPKLGT WPTMMDLATTCAQMRIFYPDVHDAELPRILVDHDTQTCHVVDSFGSQTTGYHILKASSVS QLILFANDELESDIKHYRVGGVPNASPELGSTISPFREGGVIMSESAALKLLLKGIFRPK VMRQLLLDEPYLLILSILSPGILMAMYNNGIFELAVRLWINEKQSIAMIASLLSALALRV SAAETLVAQRIIIDAAATDLLDATCDGFNLHLTYPTALMVLQVVKNRNECDDTLFKAGFP SYNTSVVQIMEKNYLNLLNDAWKDLTWRENYPQHGTHTEQNALSTRYIKPTEKADLKGLY NISPQAFLGRSAQVVKGTASGLSERFNNYFNTKCVNISSFFIRRIFRRLPTFVTFVNSLL VISMLTSVVAVCQAIILDQRKYRREIELMQIEKNEIVCMELYASLQRKLERDFTWDEYIE YLKSVNPQIVQFAQAQMEEYDVRHQRSTPVVKNLEQVVAFMALVIMVFDAERSDCVFKTL NKFKGVLSSLDYEVRHQSLDDVIKNFDERNEIIDFELSEDTIRTSSVLDTKFSDWWDRQI QMGHTLPHYRTEGHFMEFTRATAVQVANDIAHSEHLDFLVRGAVGSGKSTGLPVHLSVAG SVLLIEPTRPLAENVFKQLSSEPFFKKPTLRMRGNSIFGSSPISVMTSGFALHYFANNRS QLAQFNFVIFDECHVLDPSAMAFRSLLSVYHQACKVLKVSATPVGREVEFTTQQPVKLIV EDTLSFQSFVDAQGSKTNADVVQFGSNVLVYVSSYNEVDTLAKLLTDKNMMVTKVDGRTM KHGCLEIVTKGTSARPHFVVATNIIENGVTLDIDVVVDFGLKVSPFLDIDNRSIAYNKVS VSYGERIQRLGRVGRFKKGVALRIGHTEKGIIEIPSMVATEAALACFAYNLPVMTGGVST SLIGNCTVRQVKTMQQFELSPFFIQNFVAHDGSMHPVIHDILKKYKLRDCMTPLCDQSIP YRASSTWLSVSEYERLGVALEIPKQVKIAFHIKEIPPKLHEMLWETVVKYKDVCLFPSIR ASSISKIAYTLRTDLFAIPRTLILVERLLEEERVKQSQFRSLIDEGCSSMFSIVNLTNTL RARYAKDYTAENIQKLEKVRSQLKEFSNLDGSACEENLIKRYESLQFVHHQAATSLAKDL KLKGIWNKSLVAKDLIIAGAVAIGGIGLIYSWFTQSVETVSHQGKNKSKRIQALKFRHAR DKRAGFEIDNNDDTIEEFFGSAYRKKGKGKGTTVGMGKSSRRFINMYGFDPTEYSFIQFV DPLTGRQIEENVYADIRDIQERFSEVRKKMVENDDIEMQALGSNTTIHAYFRKDWCDKAL KIDLMPHNPLKVCDKTNGIAKFPERELELRQTGPAVEVDVKDIPAQEVEHEAKSLMRGLR DFNPIAQTVCRLKVSVEYGASEMYGFGFGAYIVANHHLFRSYNGSMEVQSMHGTFRVKNL HSLSVLPIKGRDIILIKMPKDFPVFPQKLHFRAPTQNERICLVGTNFQEKYASSIITETS TTYNIPGSTFWKHWIETDNGHCGLPVVSTADGCIVGIHSLANNAHTTNYYSAFDEDFESK YLRTNEHNEWVKSWVYNPDTVLWGPLKLKDSTPKGLFKTTKLVQDLIDHDVVVEQAKHSA WMFEALTGNLQAVATMKSQLVTKHVVKGECRHFTEFLTVDAEAEAEAFFRPLMDAYGKSL LNRDAYIKDIMKYSKPIDVGVVDRMHLRKPSIGLSSTCNVHGFKKCAYVTDEQEIFKALN MKAAVGASYGCKKKDYFEHFTDADKEEIVMQSCLRLYKGLLGIWNGSLKAELRCKEKILA NKTRTFTAAPLDTLLGGKVCVDDFNNQFYSKNIECCWTVGMTKFYGGWDKLLRRLPENWV YCDADGSQFDSSLTPYLINAVLTIRSTYMEDWDVGLQMLRNLYTEIVYTPISTPDGTIVK KFRGNNSGQPSTVVDNSLMVVLAMHYALIKECVEFEEIDSTCVFFVNGDDLLIAVNPEKE SILDRMSQHFSDLGLNYDFSSRTRRKEELWFMSHRGLLIEGMYVPKLEEERIVSILQWDR ADLPEHRLEAICAAMIESWGYSELTHQIRRFYSWLLQQQPFATIAQEGKAPYIASMALRK LYMDRAVDEEELRAFTEMMVALDDEFELDSYEVHHQANDTIDAGGSNKKDAKPEQGSIQP NPNKGKDKDVNAGTSGTHTVPRIKAITSKMRMPTSKGATVLNLEHLLEYAPQQIDISNTR ATQSQFDTWYEAVRMAYDIGETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGNEQVEYP LKPIVENAKPTLRQIMAHFSDVAEAYIEMRNKKEPYMPRYGLIRNLRDMGLARYAFDFYE VTSRTPVRAREAHIQMKAAALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGV KNM NT seq 9192 nt NT seq  +upstreamnt  +downstreamnt atggcaacttacatgtcaacaatctgttttggttcgtttgaatgcaagctaccatactca ccagcctcttgcgagcatattgtgaaggaacgagaagtgccggcttccgttgatcctttc gcagatctggaaacacaacttagtgcacgattgctcaagcaaaaatatgctactgttcgt gtgctcaaaaacggtacttttacgtaccgatacaagactgatgcccagataatgcgcatt cagaagaaactggagaggaaggatagggaagaatatcacttccaaatggccgctcctagt attgtgtcaaaaattactatagctggcggagatcctccatcaaagtctgagccacaagca ccaagagggatcattcatacaactccaaggatgcgtaaagtcaagacacgccccataata aagttgacagaaggccagatgaatcacctcattaagcagataaaacagattatgtcggag aaaagagggtctgtccacttaattagtaagaaaaccactcatgttcaatataagaagata cttggtgcatactccgcagcggttcgaactgcacatatgatgggtttgcgacggagagtg gacttccgatgtgatatgtggacagttggacttttgcaacgtctcgctcggacggacaaa tggtccaatcaagtccgcactatcaacatacgaaggggtgatagtggagtcatcttgaac acaaaaagcctcaaaggccactttggtagaagttcaggaggcttgttcatagtgcgtgga tcacacgaagggaaattgtatgatgcacgttctagagttactcagagtattttaaactca atgatccagttttcgaatgccgacaatttttggaagggtctggacggtaattgggcacga atgagatatccttcggatcacacatgtgtagctggtttacctgtcgaagattgtggtagg gtagctgcattgatggcacacagtatccttccgtgctataagataacttgccccacctgt gctcaacagtatgccagcttgccagttagcgatctgtttaagctattgcataaacatgca agagatggtttgaatcgattgggagcggataaagaccggtttatacatgttaataagttc ttgatagcgttagagcatctaactgaaccggtggacctgaatctcgagcttttcaatgag atatttaaatccataggggagaaacagcaagcaccgttcaagaatttaaatgtcttaaat aatttcttcctgaaaggaaaagaaaatacagctcatgaatggcaggtagctcaattgagt ttgctcgaattagcaaggttccagaagaacagaactgataacatcaagaaaggtgatata tctttcttcagaaataaattatctgccaaggcaaactggaatctgtatttgtcgtgcgac aaccagctggataaaaatgcaaacttcctctggggacaaagggagtatcatgctaagcgg tttttctcaaacttctttgaggaaattgatccagcaaagggatactcagcatatgaaatc cgcaagcatccaagtggaacaaggaagctctcaattggtaacttagttgtcccacttgat ttagctgagtttaggcagaagatgaaaggtgactataggaaacaaccaggggtcagcaaa aagtgcacgagttcgaaagatggtaattatgtgtatccctgttgttgcacaacacttgat gatggttcagccattgaatcaacattctatccaccaactaaaaagcaccttgtaattggc aatagtggtgaccaaaaatttgttgatttaccaaaaggggattcggagatgttatacatt gccaagcagggttattgttatattaacgtgtttcttgcaatgctgattaacattagcgag gaggatgcaaaggatttcacaaagaaagttcgcgacatgtgtgtgccaaagcttggaacc tggccaactatgatggatttggcgaccacttgtgctcaaatgagaatattctatcctgac gtacatgatgcagaattgcccagaatattggttgaccatgacactcaaacgtgtcatgtg gttgactcatttggctcgcagacaactggatatcatattctaaaagcatccagcgtgtct caacttatcttgtttgcaaatgatgaattagaatctgatataaaacattatagagttggt ggtgttcctaatgctagccctgaacttgggtccacaatatcacctttcagagaaggagga gttataatgtctgagtcggcagcgctgaaactgcttttgaagggaatttttagacctaag gtgatgagacagttgctgttagatgagccttacctgttgattctatcaatactatcccct ggcatactgatggctatgtataataatgggatttttgaacttgcggtgaggttgtggatt aatgagaaacaatccatagctatgatagcatcgctactatcagctttagccctacgagtg tcagcggcagaaacactcgtcgcacagaggattataattgatgctgcagctacagacctc cttgatgctacgtgtgatgggttcaacctacatctaacgtaccccactgcattgatggtg ttgcaagttgttaagaatagaaatgaatgtgatgataccctattcaaggcgggttttcca agttacaacacgagcgtcgtacagattatggaaaaaaattatctaaatctcttgaacgat gcttggaaagatttaacttggcgagaaaattatccgcaacatggtactcatacagagcaa aacgctctatccactcggtacataaaacccacagaaaaggcagatttgaaagggttatac aacatatcaccacaagcgttcttgggccgaagcgcccaggtggtcaaaggcactgcctca ggattgagcgagcgatttaataattatttcaatactaagtgtgtaaatatttcatccttt ttcattcgtagaatctttaggcgtttgccaacctttgtcacttttgttaactcattatta gttattagtatgttaaccagcgtagtggcagtgtgtcaggcaataattttagatcagagg aagtataggagagaaatcgagttgatgcagatagagaagaatgagattgtctgcatggag ctatatgcaagtttacagcgcaaacttgaacgcgatttcacatgggatgagtacattgag tatttgaagtcagtaaaccctcagatagttcagtttgctcaagcgcagatggaagaatat gatgtgcgacaccagcgttccacaccagttgttaaaaatttggaacaagtggtagcattt atggctttagtcatcatggtgtttgatgctgaaaggagtgattgcgtgttcaaaactctc aataaatttaagggtgtcctttcctcactggattatgaagttagacatcagtccttagac gatgtgatcaagaattttgatgagaggaatgagattattgattttgaattgagtgaggac acaattcgaacttcatcagtgctagatacaaagtttagtgattggtgggatcgacaaatc cagatgggacatacacttccacattacagaactgaggggcacttcatggaatttacaaga gcaactgctgttcaagtggctaatgacattgcccatagcgaacacctagactttttagta cggggagctgttgggtctggaaagtcaactgggttgcctgttcatcttagtgtggccgga tctgtgcttttaattgaaccaacgcgaccactagcggagaacgttttcaaacagctatct agtgaaccattcttcaagaagccaacactgcgtatgcgtggaaatagtatatttggctct tctccaatctccgtcatgactagcggatttgcgctacactacttcgccaataatcgctct caattagctcagttcaactttgtaatatttgatgagtgtcatgttctggatccttccgcg atggcgttccgcagtctgctgagtgtttatcatcaagcatgcaaagtattaaaagtgtca gctactccagtgggaagagaggttgaattcacaacacagcagccagtcaagttaatagtg gaggacacactgtctttccaatcatttgttgatgcacaaggttctaaaactaatgctgat gttgttcagtttggttcaaacgtacttgtgtacgtgtcgagctacaatgaagttgacacc ttggccaagctcctaacagacaagaatatgatggtcacaaaggttgatggcagaacaatg aagcacggttgcctagaaattgtcacaaaaggaaccagtgcgagaccacattttgttgta gcaaccaacataattgagaatggagtgactttggacatagacgtggttgtggactttggg ttgaaagtctcaccgttcttggacattgacaataggagcattgcttacaataaggtgagt gttagctatggtgagagaattcaaaggctgggtcgtgttggacgcttcaagaaaggagta gcattgcgcattggacacactgaaaagggaattattgaaattccaagcatggtcgctact gaggcggctcttgcttgctttgcatataacttgccagtgatgacaggaggcgtttcaact agtctgattggcaattgtactgtgcgccaggttaaaacaatgcagcaatttgaattgagt cccttctttatccagaatttcgttgctcatgatggatcaatgcatcctgtcatacatgac attcttaaaaagtataaacttcgagattgtatgacgcctttgtgcgatcagtctatacca tacagggcatcgagtacttggttatcggttagtgaatatgagcgacttggagtggcctta gaaattccaaagcaagtcaaaattgcattccatatcaaagagatccctcctaagctccac gaaatgctttgggaaacggttgtcaagtacaaagacgtttgcttatttccaagcattcga gcatcgtccatcagcaaaatcgcatacacattgcgtacagatctcttcgccatcccaaga actctaatattggtggagagattgcttgaagaggagcgagtgaagcagagccaattcaga agtctcatcgatgaagggtgctcaagcatgttttcaattgttaacttaaccaacactctc agagctagatatgcaaaagattacaccgcagagaacatacaaaaacttgagaaggtgaga agtcaactaaaagaattctcaaatttggatggttctgcatgtgaggagaatttaataaag aggtatgagtcgttgcagttcgttcatcaccaagctgcgacgtcacttgcaaaggatctc aagttgaaggggatttggaacaagtcattagtggctaaagacttgatcatagcaggcgct gttgcaattggtggaataggactcatatatagttggttcacacaatcagttgagactgtg tctcatcaagggaaaaataaatccaaaagaatccaagccttgaagtttcgccatgctcgt gacaaaagggctggctttgaaattgacaacaatgatgacacaatagaggaattcttcgga tctgcatacaggaaaaagggaaaaggtaaaggtaccacagttggtatgggtaagtcaagc aggaggttcatcaacatgtatgggtttgatccaacagagtactcattcatccaattcgtt gatccactcactgggcggcaaatagaagaaaatgtctatgctgacattagagatattcaa gagagatttagtgaagtgcgaaagaaaatggttgagaatgatgacattgaaatgcaagcc ttgggtagtaacacgaccatacatgcatacttcaggaaagattggtgtgataaagctttg aagattgatttaatgccacataacccactcaaagtttgtgacaaaacaaatggcattgcc aaatttcctgagagagagctcgaactaaggcagactgggccagctgtagaagtcgatgtg aaggacataccagcacaggaggtggagcatgaagctaaatcgctcatgagaggcttgaga gacttcaacccaattgcccaaacagtttgtaggctgaaagtatctgttgaatatggggca tcagagatgtacggttttggatttggagcatacatagtagcgaaccaccatttatttagg agttacaatggttccatggaggtgcaatccatgcacggtacattcagggtgaagaatcta cacagtttgagcgttctgccaattaaaggtagggacatcatcctcatcaaaatgccgaaa gatttccctgtctttccacagaaattgcatttccgagctcctacacagaatgaaagaatt tgtttagttggaaccaacttccaagagaagtatgcttcgtcgatcatcacagaaacaagc actacttacaatataccaggcagcacattctggaagcattggattgaaacagataatgga cattgtggactaccagtggtgagcaccgccgatggatgtatagtcggaattcacagtctg gcaaacaatgcacacaccacgaactactactcagccttcgatgaagattttgaaagcaag tacctccgaaccaatgagcacaatgaatgggtcaagtcttgggtttataatccagacaca gtgttgtggggcccgttgaaacttaaagacagcactcccaaagggttattcaaaacaaca aagcttgtgcaagatctaatcgatcatgatgtagtggtggagcaagctaagcattctgca tggatgtttgaagccttgacaggaaatttgcaagctgtcgcaacaatgaagagccaatta gtaaccaagcatgtagttaaaggagagtgtcgacacttcacagaatttctgactgtggat gcagaggcagaggcagaggcattcttcaggcctttgatggatgcgtatgggaaaagcttg ctaaatagagatgcgtacatcaaggacataatgaagtattcaaaacctatagatgttggt gtcgtggatcggatgcatttgaggaagccatcaatagggttatcatctacctgcaatgtg cacggcttcaagaagtgtgcatatgtcactgatgagcaagaaattttcaaagcgctcaac atgaaagctgcagtcggagccagttatgggtgcaaaaagaaagactattttgagcatttc actgatgcagataaggaagaaatagtcatgcaaagctgtctgcgattgtataaaggtttg cttggcatttggaacggatcattgaaggcagagctccggtgtaaggagaagatacttgca aataagacgaggacgttcactgctgcacctctagacactttgctgggtggtaaagtgtgt gttgatgacttcaataatcaattttattcaaagaatattgaatgctgttggacagttggg atgactaagttttatggtggttgggataaactgcttcggcgtttacctgagaattgggta tactgtgatgctgatggctcacagtttgatagttcactaactccatacctaatcaatgct gttctcaccatcagaagcacatacatggaagactgggatgtggggttgcagatgctgcgc aatttatacactgagattgtttacacaccaatttcaactccagatggaacaattgtcaag aagtttagaggtaataatagtggtcaaccttctaccgttgtggataattctctcatggtt gtccttgctatgcattacgctctcattaaggagtgcgttgagtttgaagaaatcgacagc acgtgtgtattctttgttaatggtgatgacttattgattgctgtgaatccggagaaagag agcattctcgatagaatgtcacaacatttctcagatcttggtttgaactatgatttttcg tcgagaacaagaaggaaggaggaattgtggttcatgtcccatagaggcctgctaatcgag ggtatgtacgtgccaaagcttgaagaagagagaattgtatccattctgcaatgggataga gctgatctgccagagcacagattagaagcgatttgcgcagctatgatagagtcctggggt tattctgaactaacacaccaaatcaggagattctactcatggttattgcaacagcaacct tttgcaacaatagcgcaggaagggaaggctccttatatagcaagcatggcactaaggaaa ctgtatatggatagggctgtggatgaggaagagctaagagccttcactgaaatgatggtc gcattagatgatgagtttgagcttgactcttatgaagtacaccatcaagcaaatgacaca attgatgcaggaggaagcaacaagaaagatgcaaaaccagagcagggcagcatccagcca aacccgaacaaaggaaaggataaggatgttaatgcaggcacatctgggacacatactgtg ccgagaatcaaggctatcacgtccaaaatgagaatgcccacaagcaagggagcaaccgtg ctaaacttagaacatttgcttgagtatgctccacaacaaattgatatttcaaatactcgg gcaactcaatcacagtttgatacgtggtatgaggcagtgcggatggcatacgacatagga gaaactgagatgccaactgtgatgaatgggcttatggtttggtgcattgaaaatggaacc tcgccaaatgtcaacggagtttgggttatgatggatgggaatgaacaagttgagtacccg ttgaaaccaatcgttgagaatgcaaaaccaacccttaggcaaatcatggcacatttctca gatgttgcagaagcgtatatagaaatgcgcaacaaaaaggaaccatatatgccacgatat ggtttaattcgaaatctgcgggatatgggtttagcgcgttatgcctttgacttttatgag gtcacatcacgaacaccagtgagggctagggaagcgcacattcaaatgaaggccgcagca ttgaaatcagcccaacctcgacttttcgggttggacggtggcatcagtacacaagaggag aacacagagaggcacaccaccgaggatgtctctccaagtatgcatactctacttggagtc aagaacatgtga

DBGET integrated database retrieval system