Viruses: 1494056
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Entry
1494056 CDS
T40000
Symbol
TVMVgp1
Name
(RefSeq) Tobacco vein mottling virus; polyprotein
Virus
12228
Tobacco vein mottling virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Peptidase_C6
RdRP_1
Poty_coat
Potyvirid-P3
Poty_PP
Peptidase_S30
Peptidase_C4
Helicase_C
DEAD
Flavi_DEAD
ResIII
Cas3-like_C_2
Peptidase_C3
BROMI_C
PrgU
Motif
Other DBs
NCBI-GeneID:
1494056
NCBI-ProteinID:
NP_056867
RS:
NC_001768
UniProt:
P09814
Structure
PDB
PDBj
LinkDB
All DBs
Position
NC_001768:154..9225
Genome browser
AA seq
3023 aa
AA seq
DB search
MAATMIFGSFTHDLLGKAMSTIHSAVTAEKDIFSSIKERLERKRHGKICRMKNGSIYIKA
ASSTKVEKINAAAKKLADDKAAFLKAQPTIVDKIIVNEKIQVVEAEEVHKREDVQTVFFK
KTKKRAPKLRATCSSSGLDNLYNAVANIAKASSLRVEVIHKKRVCGEFKQTRFGRALFID
VAHAKGHRRRIDCRMHRREQRTMHMFMRKTTKTEVRSKHLRKGDSGIVLLTQKIKGHLSG
VRDEFFIVRGTCDDSLLEARARFSQSITLRATHFSTGDIFWKGFNASFQEQKAIGLDHTC
TSDLPVEACGHVAALMCQSLFPCGKITCKRCIANLSNLDFDTFSELQGDRAMRILDVMRA
RFPSFTHTIRFLHDLFTQRRVTNPNTAAFREILRLIGDRNEAPFAHVNRLNEILLLGSKA
NPDSLAKASDSLLELARYLNNRTENIRNGSLKHFRNKISSKAHSNLALSCDNQLDQNGNF
LWGLAGIAAKRFLNNYFETIDPEQGYDKYVIRKNPNGERKLAIGNFIISTNLEKLRDQLE
GESIARVGITEECVSRKDGNYRYPCCCVTLEDGSPMYSELKMPTKNHLVIGNSGDPKYLD
LPGEISNLMYIAKEGYCYINIFLAMLVNVDEANAKDFTKRVRDESVQKLGKWPSLIDVAT
ECALLSTYYPAAASAELPRLLVDHAQKTIHVVDSYGSLNTGYHILKANTVSQLEKFASNT
LESPMAQYKVGGLVYSENNDASAVKALTQAIFRPDVLSELIEKEPYLMVFALVSPGILMA
MSNSGALEFGISKWISSDHSLVRMASILKTLASKVSVADTLALQKHIMRQNANFLCGELI
NGFQKKKSYTHATRFLLMISEENEMDDPVLNAGYRVLEASSHEIMEKTYLALLETSWSDL
SLYGKFKSIWFTRKHFGRYKAELFPKEQTDLQGRYSNSLRFHYQSTLKRLRNKGSLCRER
FLESISSARRRTTCAVFSLLHKAFPDVLKFINTLVIVSLSMQIYYMLVAIIHEHRAAKIK
SAQLEERVLEDKTMLLYDDFKAKLPEGSFEEFLEYTRQRDKEVYEYLMMETTEIVEFQAK
NTGQASLERIIAFVSLTLMLFDNERSDCVYKILTKFKGILGSVENNVRFQSLDTIVPTQE
EKNMVIDFELDSDTAHTPQMQEQTFSDWWSNQIANNRVVPHYRTEGYFMQFTRNTASAVS
HQIAHNEHKDIILMGAVGSGKSTGLPTNLCKFGGVLLLEPTRPLAENVTKQMRGSPFFAS
PTLRMRNLSTFGSSPITVMTTGFALHFFANNVKEFDRYQFIIFDEFHVLDSNAIAFRNLC
HEYSYNGKIIKVSATPPGRECDLTTQYPVELLIEEQLSLRDFVDAQGTDAHADVVKKGDN
ILVYVASYNEVDQLSKMLNERGFLVTKVDGRTMKLGGVEIITKGSSIKKHFIVATNIIEN
GVTLDVDVVVDFGLKVVPNLDSDNRLVSYCKIPISLGERIQRFGRVGRNKPGVALRIGET
IKGLVEIPSMIATEAAFLCFVYGLPVTTQNVSTSILSQVSVRQARVMCQFELPIFYTAHL
VRYDGAMHPAIHNALKRFKLRDSEINLNTLAIPTSSSKTWYTGKCYKQLVGRLDIPDEIK
IPFYTKEVPEKVPEQIWDVMVKFSSDAGFGRMTSAAACKVAYTLQTDIHSIQRTVQIIDR
LLENEMKKRNHFNLVVNQSCSSHFMSLSSIMASLRAHYAKNHTGQNIEILQKAKAQLLEF
SNLAIDPSTTEALRDFGYLEAVRFQSESEMARGLKLSGHWKWSLISRDLIVVSGVGIGLG
CMLWQFFKEKMHEPVKFQGKSRRRLQFRKARDDKMGYIMHGEGDTIEHFFGAAYTKKGKS
KGKTHGAGTKAHKFVNMYGVSPDEYSYVRYLDPVTGATLDESPMTDLNIVQEHFGEIRRE
AILADAMSPQQRNKGIQAYFVRNSTMPILKVDLTPHIPLKVCESNNIAGFPEREGELRRT
GPTETLPFDALPPEKQEVAFESKALLKGVRDFNPISACVWLLENSSDGHSERLFGIGFGP
YIIANQHLFRRNNGELTIKTMHGEFKVKNSTQLQMKPVEGRDIIVIKMAKDFPPFPQKLK
FRQPTIKDRVCMVSTNFQQKSVSSLVSESSHIVHKEDTSFWQHWITTKDGQCGSPLVSII
DGNILGIHSLTHTTNGSNYFVEFPEKFVATYLDAADGWCKNWKFNADKISWGSFTLVEDA
PEDDFMAKKTVAAIMDDLVRTQGEKRKWMLEAAHTNIQPVAHLQSQLVTKHIVKGRCKMF
ALYLQENADARDFFKSFMGAYGPSHLNKEAYIKDIMKYSKQIVVGSVDCDTFESSLKVLS
RKMKEWGFENLEYVTDEQTIKNALNMDAAVGALYSGKKKQYFEDLSDDAVANLVQKSCLR
LFKNKLGVWNGSLKAELRPFEKLIENKTRTFTAAPIETLLGGKVCVDDFNNHFYSKHIQC
PWSVGMTKFYGGWNELLGKLPDGWVYCDADGSQFDSSLSPYLINAVLRLRLSSMEEWDVG
QKMLQNLYTEIVYTPISTPDGTIVKKFKGNNSGQPSTVVDNTLMVVLAMYYALSKLGVDI
NSQEDVCKFFANGDDLIIAISPELEHVLDGFQQHFSDLGLNYDFSSRTRDKKELWFMSHR
ALSKDGILIPKLEPERIVSILEWDRSAEPHHRLEAICASMIEAWGYTDLLQNIRRFYKWT
IEQEPYRSLAEQGLAPYLSEVALRRLYTSQIATDNELTDYYKEILANNEFLRETVRFQSD
TVDAGKDKARDQKLADKPTLAIDRTKDKDVNTGTSGTFSIPRLKKAAMNMKLPKVGGSSV
VNLDHLLTYKPAQEFVVNTRATHSQFKAWHTNVMAELELNEEQMKIVLNGFMIWCIENGT
SPNISGVWTMMDGDEQVEYPIEPMVKHANPSLRQIMKHFSNLAEAYIRMRNSEQVYIPRY
GLQRGLVDRNLAPFAFDFFEVNGATPVRAREAHAQMKAAALRNSQQRMFCLDGSVSGQEE
NTERHTVDDVNAQMHHLLGVKGV
NT seq
9072 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacaatgatctttggttccttcactcacgatcttttgggcaaggccatgtca
accattcactcagccgtcacagctgagaaagacatattctccagcataaaggagcgtctt
gaaagaaagaggcatgggaaaatatgccgaatgaaaaacggcagcatatacatcaaggct
gcttcgtccacgaaagtggagaaaataaacgcagcagccaagaagctagccgatgataaa
gcagctttcttgaaggctcaaccaacaattgttgacaaaatcattgtcaatgagaagata
caagtggtggaagctgaagaagtgcacaagcgagaggatgtgcaaactgtattctttaag
aaaaccaaaaagagggcgcccaagttgcgcgcaacttgtagcagcagtggtttagataat
ttgtataatgcagtggctaatatagccaaagcaagttctcttcgagtggaggttatccac
aaaaagagggtttgtggagagttcaagcaaacaaggtttggtagagccttgttcattgac
gttgcccacgcaaaaggccacagacgtcgcatcgattgcagaatgcatagacgtgagcag
cgaactatgcacatgttcatgcggaaaactaccaagacagaagttagatctaagcatctt
agaaaaggcgatagtgggatagttctcctgacacagaagataaaaggacatctcagcgga
gtgcgggatgaattctttattgttagaggaacgtgtgatgatagtttgttggaggcaaga
gctagattcagtcaatccatcacactgcgtgcgactcacttctcaactggtgatatattt
tggaagggctttaacgcatccttccaggaacaaaaagctataggactcgatcacacttgt
acatctgacttgccagtggaagcttgtgggcatgttgcagctttaatgtgtcaaagctta
tttccgtgcgggaaaatcacatgtaagagatgcatagcaaatcttagtaacttggatttt
gacacattttctgaattacaaggtgatagagcaatgcgaattctggatgtaatgagagca
cggtttccaagttttacccacacaattcgcttcttacacgacttgttcactcaacgacga
gtcactaatcccaacactgccgctttcagggaaattcttcgtttgattggagatagaaat
gaagcaccatttgcgcatgtcaatcgattgaatgaaattcttttacttggttcaaaagcc
aatcctgacagccttgcaaaggcgtcagactctttgcttgagttggcgaggtatctgaac
aatcgcacagagaacattcgcaacggatcattgaagcatttcagaaataaaatttcctca
aaagcgcattcaaatctggctttgtcttgcgacaatcagctggaccagaatggaaatttt
ttatggggactcgccggtattgccgcaaagagatttctcaataattactttgaaacaatt
gatcctgagcaaggttatgataagtatgtcatccggaaaaacccaaatggagaacgcaaa
ttagcaattggcaattttatcatttcaacaaaccttgaaaagttgcgcgatcaactagaa
ggggagtcgattgcacgggtcggaattacagaggaatgtgttagtcggaaggatggtaat
tataggtacccatgctgctgcgtcactctcgaagatggtagtccaatgtactcagagctt
aaaatgccaacgaaaaatcatctagtaattggcaattcaggggatccgaaatacttggat
ctaccaggtgaaattagcaatcttatgtacatagcaaaggaaggatattgttatatcaac
atatttcttgcaatgcttgttaatgttgatgaagctaacgccaaggactttactaagaga
gtgagggacgagtcagtacaaaagcttggaaagtggccaagtttaatagatgtcgcaact
gaatgtgccttactatctacatattatcctgcggcggctagtgcagaactacccaggctt
ctagtagatcatgctcaaaagacaattcacgttgtggattcttatgggtcgttaaatacg
ggataccacatcctgaaagcaaatacagtgagccaacttgaaaagtttgctagcaacacg
ctagaatcaccaatggcacaatataaagtgggtggtctcgtgtattcagagaacaatgat
gccagtgcagtcaaggcattaacacaggcaatatttcggccagatgtcttaagcgaattg
atagaaaaagagccttatcttatggtctttgccttagtatcacctgggatcttaatggca
atgtcaaatagtggtgcactcgaatttggaatttcaaaatggatttcaagcgatcatagt
ctggttcgaatggcatctattttgaaaactcttgccagtaaagttagtgtggctgataca
ctagctttgcaaaaacacataatgaggcagaatgcaaattttctatgtggagagttgata
aatggctttcagaagaagaaatcgtatacacatgcaacgcgatttctactgatgatttca
gaggaaaatgaaatggatgatcctgtactgaatgcaggatatagagtattagaagcatcg
tctcatgagataatggaaaaaacctatctcgcactgttagagacatcttggtcagactta
agcttgtatggaaaattcaagtcaatctggtttacgcgaaagcactttggaagatacaaa
gcagaattgttcccaaaagagcagacagacttgcaaggacgctacagcaactcgttgcgg
tttcattaccagagtacgctcaagcgcttgagaaacaaggggagtctgtgtcgagaaaga
tttttggaaagcatttcaagtgcaagacgcaggacaacatgtgcagtttttagtcttttg
cacaaagcatttccggatgttttgaaattcattaacacattagtcatagttagtttgtct
atgcaaatatattatatgcttgtagcaataatacacgagcatagggctgcaaagatcaag
agcgcgcagctcgaagaaagagtgttagaggataagaccatgctattatatgatgatttt
aaagccaagttgccagaggggtcttttgaggagtttttggaatacactcgacagcgtgat
aaagaagtgtatgagtacctgatgatggaaacaactgagattgtggaattccaagctaaa
aacacgggccaagctagcttggaaaggattatcgcatttgtgtcattaacactaatgtta
tttgacaatgagcgtagtgattgcgtgtacaaaattctgacaaaatttaaaggcatactt
ggtagtgtggaaaacaatgtcagatttcagagtctagatacaatagtcccaactcaagag
gagaagaacatggtaatagactttgagcttgatagcgacacagcacacacgccgcaaatg
caagagcaaacattcagcgactggtggagcaaccaaatagcaaataatcgcgtagttcct
cactacagaacagaaggctatttcatgcagttcacccgtaatacggcatcagctgtttca
catcaaatagcccacaatgaacataaagatattattttgatgggagcagtcggttcagga
aagtcaacgggtctgccgacaaatttatgcaaatttggcggagtgctattacttgagccc
acgcgtccactcgcagagaatgtgacaaagcaaatgaggggaagccctttcttcgcatcc
ccaactcttagaatgcgcaatctcagcacattcggctctagcccgattactgttatgaca
actggctttgctttacatttctttgcaaacaatgtgaaggaatttgatcggtaccaattt
ataatattcgatgagttccatgtgctagatagtaatgcaatagctttcaggaacctttgt
catgagtatagctacaatgggaagatcataaaagtctccgcaactcctccaggaagagag
tgtgatttaaccactcaatatccagttgagttactaattgaggagcagcttagccttcgg
gacttcgttgatgcacaaggcacagatgcccatgcagatgtggttaaaaagggcgacaac
attcttgtgtacgttgcaagttacaatgaagttgatcagttgagcaaaatgttgaatgag
cgaggttttctggtgacgaaagttgatggcagaactatgaagctaggaggggttgagatc
ataacaaaaggaagctcaatcaagaaacacttcatcgtggcaaccaatataatcgagaat
ggggtaacacttgatgtcgatgttgtggtagactttggactcaaagtcgttccaaatctt
gattccgataatcgcttagttagttattgcaaaattcccataagcttaggtgagagaatt
caaagatttggccgagttggtcgcaataaacccggagtggcgcttagaattggggagaca
ataaaagggttggtggaaattccatctatgattgcaacagaggcggcttttctgtgtttt
gtttacggcttaccagtcacaactcagaatgtctcaactagcattttatcacaagtgagt
gttcgccaagcgcgagttatgtgtcaatttgaactcccaatcttttacacagctcatttg
gtacggtatgatggggccatgcatccagccattcacaatgcactaaagcgatttaagctg
cgagatagcgaaatcaacctgaacacattggcaatcccaactagcagttcaaagacttgg
tatactggaaagtgttacaagcaattagtgggacggctggacatccctgatgagatcaag
atcccattctacacaaaggaggtacctgaaaaggtgcctgagcagatctgggacgttatg
gtgaaattttcaagtgacgccggctttgggagaatgacaagtgccgctgcatgtaaggtt
gcatacacactgcaaactgacattcattctatacagagaactgtgcagattattgatcgc
ctacttgagaatgaaatgaagaagagaaaccatttcaacttggttgtaaatcaatcgtgt
tcatctcacttcatgtccttatcatcaattatggcatcactcagagcccattatgccaag
aatcacaccgggcaaaatattgaaattcttcagaaggcaaaggcccagctgcttgaattc
tccaaccttgcaatagacccatcaacaacagaagccttgcgagacttcggatatcttgag
gcagtaagattccagagtgaatcggagatggctcgtggtcttaagttaagtggacattgg
aagtggtcactcattagtagagatctcattgttgtaagtggcgtcggaattggtcttggt
tgcatgttgtggcaattcttcaaagagaagatgcatgaaccagttaaatttcaaggcaag
agtagacgccgacttcaattcagaaaagcaagggacgataagatgggttatatcatgcat
ggtgaaggggacacaattgaacatttctttggcgcggcctatacaaagaaaggaaagtcc
aaagggaaaactcatggcgctggaacgaaggcgcacaaatttgtgaatatgtatggagtc
agtcctgatgaatattcatatgtacgttatctagatccagtcacgggtgcgactctagat
gaatctccaatgacagacttaaacattgtgcaagaacactttggagaaatcaggagggaa
gctatacttgctgatgcaatgtcaccacaacaaaggaacaagggaatccaggcatacttt
gttagaaattcaacaatgccaattctcaaagttgatctgacaccacacattcctcttaaa
gtatgtgagtctaataatattgctggctttccagagagagaaggggaattgcggagaaca
ggcccaacagaaacactcccctttgatgcactgcccccagaaaaacaagaagttgcattc
gagtcaaaggcgctacttaagggagtgcgagattttaatccaatctctgcttgcgtatgg
ctccttgagaactcctcggatgggcatagtgagagactgtttggcattggttttggccca
tatatcattgccaaccaacatctttttagaaggaacaatggagagttgactatcaaaacc
atgcatggtgagttcaaagtcaagaactcaacacaattgcagatgaaaccagttgagggc
agagacataatagttatcaaaatggctaaggacttcccaccattccctcaaaaactaaaa
ttcagacagcctaccatcaaagatagagtgtgcatggtatccacaaattttcagcagaaa
agtgtctctagtctagtgtctgagtcatcacacattgtgcataaagaggacacttcattc
tggcaacactggataacaacaaaggatggacaatgtggaagtccgctggtttcaatcatt
gatggaaatattttggggatccacagcctgacgcatacgaccaatggtagcaattacttc
gtggaatttcctgagaagttcgtagctacatatcttgatgccgctgatggttggtgcaag
aattggaagttcaatgctgataagatcagttggggttcctttacattagttgaggatgcg
cccgaagatgacttcatggccaagaaaactgttgccgccatcatggacgatttggtccgc
actcaaggggagaagcgaaaatggatgttggaagcagcgcatacaaatattcaaccagtt
gcgcatttgcaaagtcagttggtcacaaagcacatcgtgaaaggccgctgtaaaatgttt
gcactttatcttcaggaaaatgcagatgcgcgtgatttctttaagtcattcatgggggca
tatggtccgagccacttgaacaaggaagcatacatcaaggacatcatgaagtattccaag
cagattgtggtaggctctgttgattgtgacacattcgaatcgtcattgaaagttcttagc
aggaagatgaaagagtggggatttgagaatcttgaatatgtcacagatgagcaaactatc
aaaaatgcattaaacatggatgctgcagttggtgcactttacagcggaaagaaaaagcaa
tattttgaggacttatctgatgacgctgtagcaaatctggttcaaaagagttgtctccgc
ttattcaaaaataaactaggcgtctggaatggatcacttaaagcggaacttagaccgttc
gagaagctcatcgagaataaaacacggacattcacagcagcaccaattgagacattgctc
ggaggaaaagtctgtgttgatgattttaacaatcatttctacagcaagcacatacaatgc
ccttggagcgttggaatgacaaagttctatggaggctggaatgaacttcttggaaagctt
cctgatggatgggtatattgcgatgctgatggttcacaatttgatagctcattatcccca
tatttaataaatgcagtgctccgtctacgattgtcaagcatggaagagtgggatgttgga
cagaagatgttgcaaaatctctacacggagattgtttacacaccaatatcaacaccagat
ggcacaattgttaagaagtttaagggcaacaacagtggacagccatctacggttgtggac
aacacactcatggtggtgcttgcaatgtactatgcactgtccaaacttggagtcgacata
aacagccaggaggatgtgtgtaaattctttgccaatggagatgatcttataattgccata
tcaccagaacttgaacatgtgcttgatggttttcagcaacattttagtgacttaggcttg
aattatgatttctcgtctcgcacaagagataaaaaggagttgtggttcatgtctcacaga
gcactcagcaaagatgggatattaataccaaagttagaacctgagcgcatcgtgtccatt
cttgaatgggatcgtagtgcagagcctcaccatagattagaagcaatttgtgcttccatg
attgaggcgtggggttacactgacctactacagaacatcagaaggttctataaatggaca
atagagcaagaaccttacagaagccttgcagaacagggccttgcaccatatttgtcagaa
gttgcactaagaagattatacacatcgcaaatagccactgacaatgaactcacagattac
tacaaggagatactcgcaaacaatgaattcttgcgtgaaactgtgagatttcaaagtgat
acagtagatgctgggaaggacaaggcaagggatcagaaactagctgataagccaacactg
gcaattgatcgcacaaaggacaaggatgttaataccggtacaagcggcacatttagcatt
ccaaggctcaagaaagccgcaatgaatatgaaattgccaaaggttggaggaagttcagtt
gtcaacttggatcatctcctaacatataagccagcacaggaatttgttgtgaacacgaga
gcaacacactctcagtttaaggcatggcacacaaatgttatggctgaacttgaattaaat
gaagagcaaatgaaaatagtgctcaatggcttcatgatttggtgtatagagaatggaacg
tcaccaaacatcagtggtgtgtggaccatgatggatggtgatgaacaagtggagtatcca
atcgaaccaatggtgaagcatgcgaatccctcattacgtcagataatgaaacactttagt
aatcttgctgaggcttacataaggatgaggaattcagaacaggtctacatacccaggtat
ggcctgcagcgcggattagtagacagaaacctggcaccgtttgcctttgacttctttgag
gttaatggggcaacaccagtccgggcaagagaagcgcatgcacaaatgaaggcggccgca
ctccgcaattcgcagcagcgcatgttttgtctggatggcagcgtgtcagggcaagaagag
aacacagaacgccatactgttgacgatgttaatgctcaaatgcaccaccttctgggtgtt
aagggggtgtaa
DBGET
integrated database retrieval system
